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Results for MligTC455_31528

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31528 694 14.45 Mlig455_050895, Mlig455_067822

Neo: -

Age: -

 TREX2

Mlig455_050895 {REF} {Length: 6043} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.2]; WD domain, G-beta repeat [PF00400.34, score=27.0]; zinc-RING finger domain [PF14634.8, score=25.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.2]; RING-type zinc-finger [PF13445.8, score=22.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.0]; Prokaryotic RING finger family 4 [PF14447.8, score=18.8]} {Human: ENSG00000183479, TREX2, three prime repair exonuclease 2, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [RH, Score=108, Expect=2e-25]} {Dmel: FBgn0031484, CG3165, [RH, Score=84.3, Expect=5e-17]} {RNA1509_53404} {RNA1310_9394} {RNA815_9986}

Mlig455_067822 {REF} {Length: 3371} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=23.1]} {Human: ENSG00000183479, TREX2, three prime repair exonuclease 2, [RH, Score=99.8, Expect=9e-24]} {Mouse: ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [RH, Score=104, Expect=3e-25]; ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [RH, Score=100, Expect=2e-24]} {Dmel: FBgn0031484, CG3165, [RH, Score=85.5, Expect=3e-18]} {RNA1509_43862} {RNA1310_27101} {RNA815_5644.1}

Cumulative graph for MligTC455_31528

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.046 4.159 0.03507 0.46642
RegionR2 0.916 4.159 0.28764 0.67583
RegionR3 1.251 4.159 0.06084 0.43455
RegionR4 1.432 4.159 0.06024 0.21877
RegionR5 1.411 4.159 0.02186 0.10343
RegionR6 1.11 4.159 0.12256 0.63806
RegionR7 0.092 4.159 0.81540 1.00000
RegionR8 0.834 4.159 0.37595 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.086 4.159 0.36202 1.00000
RegenerationR2 -0.015 4.159 0.96751 1.00000
RegenerationR3 -0.11 4.159 0.80882 0.98453
RegenerationR4 0.43 4.159 0.37419 0.79690
RegenerationR5 0.469 4.159 0.27143 0.70284
RegenerationR6 0.17 4.159 0.71522 0.93275
RegenerationBL -0.181 4.159 0.75533 1.00000
RegenerationTP 0.165 4.159 0.77925 1.00000


Genes with expression patterns similar to MligTC455_31528

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31528 694 14.45 Mlig455_050895, Mlig455_067822

Neo: -

Age: -

 TREX2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_050895 {REF} {Length: 6043} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.2]; WD domain, G-beta repeat [PF00400.34, score=27.0]; zinc-RING finger domain [PF14634.8, score=25.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.2]; RING-type zinc-finger [PF13445.8, score=22.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.0]; Prokaryotic RING finger family 4 [PF14447.8, score=18.8]} {Human: ENSG00000183479, TREX2, three prime repair exonuclease 2, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [RH, Score=108, Expect=2e-25]} {Dmel: FBgn0031484, CG3165, [RH, Score=84.3, Expect=5e-17]} {RNA1509_53404} {RNA1310_9394} {RNA815_9986}

Mlig455_067822 {REF} {Length: 3371} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=23.1]} {Human: ENSG00000183479, TREX2, three prime repair exonuclease 2, [RH, Score=99.8, Expect=9e-24]} {Mouse: ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [RH, Score=104, Expect=3e-25]; ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [RH, Score=100, Expect=2e-24]} {Dmel: FBgn0031484, CG3165, [RH, Score=85.5, Expect=3e-18]} {RNA1509_43862} {RNA1310_27101} {RNA815_5644.1}
2. MligTC455_25299 237 4.93 Mlig455_034036

Neo: -

Age: logFC(26M/2M)=-0.470

 ABLIM1 1.716 - - - - 0.976 0.740 Mlig455_034036 {REF} {Length: 2473} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=71.0]} {Human: ENSG00000099204, ABLIM1, actin binding LIM protein 1, [Score=129, Expect=2e-31]; ENSG00000163995, ABLIM2, actin binding LIM protein family member 2, [Score=125, Expect=4e-30]} {Mouse: ENSMUSG00000025085, Ablim1, actin-binding LIM protein 1, [Score=129, Expect=2e-31]} {Dmel: FBgn0260463, Unc-115b, Uncoordinated 115b, [Score=124, Expect=7e-30]} {Celegans: WBGene00001132, alp-1, ALP/Enigma encoding, [Score=63.5, Expect=2e-10]} {Smed: dd_Smed_v6_13138_0_1, dd_Smed_v6_13138_0_1, [RH, Score=145, Expect=8e-38]} {RNA1509_15835} {RNA1310_8528} {RNA815_15991}
3. MligTC455_52101 627 13.06 Mlig455_002568

Neo: -

Age: -

 1.68 - - - 0.730 0.950 - Mlig455_002568 {REF} {Length: 1100} {Pfam: COMM domain [PF07258.16, score=27.3]} {Smed: dd_Smed_v6_1358_0_1, dd_Smed_v6_1358_0_1, [RH, Score=78.2, Expect=1e-17]} {RNA1509_38721, RNA1509_42859} {RNA1310_14453, RNA1509_38721, RNA1509_42859} {RNA1509_38721, RNA1509_42859, RNA815_15500.1}
4. MligTC455_53666 1759 36.64 Mlig455_040811

Neo: -

Age: -

 ACAT1 0.983 - - - 0.983 - - Mlig455_040811 {REF} {Length: 4843} {TRANSSPLICED} {Pfam: Mpp10 protein [PF04006.14, score=422.2]; Thiolase, N-terminal domain [PF00108.25, score=320.7]; Thiolase, C-terminal domain [PF02803.20, score=134.6]; Family of unknown function (DUF5447) [PF17525.4, score=28.0]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=21.5]} {Human: ENSG00000075239, ACAT1, acetyl-CoA acetyltransferase 1, [RH, Score=408, Expect=2e-129]} {Mouse: ENSMUSG00000032047, Acat1, acetyl-Coenzyme A acetyltransferase 1, [RH, Score=407, Expect=4e-129]} {Dmel: FBgn0029969, CG10932, [RH, Score=434, Expect=2e-139]} {Celegans: WBGene00002183, kat-1, Acetyl-CoA acetyltransferase homolog, mitochondrial, [RH, Score=432, Expect=5e-139]} {Smed: dd_Smed_v6_1377_0_1, dd_Smed_v6_1377_0_1, [RH, Score=452, Expect=2e-146]} {RNA1509_7248} {RNA1310_18235, RNA1509_7248} {RNA1509_7248, RNA815_10304}
5. MligTC455_29209 507 10.56 Mlig455_014725

Neo: -

Age: -

 APBA1 0.964 - - - - 0.964 - Mlig455_014725 {REF} {Length: 7049} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=140.1]; PDZ domain [PF00595.26, score=89.2]; PDZ domain [PF17820.3, score=55.3]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=496, Expect=4e-162]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=491, Expect=2e-165]} {Mouse: ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=496, Expect=6e-162]; ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=492, Expect=7e-162]} {Dmel: FBgn0052677, X11Lbeta, [RH, Score=572, Expect=9e-180]} {Celegans: WBGene00002999, lin-10, [RH, Score=552, Expect=0.0]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [RH, Score=631, Expect=0.0]} {RNA1509_48945} {RNA1310_6524} {RNA815_2382}
6. MligTC455_36979 659 13.73 Mlig455_038265

Neo: -

Age: -

 SPTLC1 0.963 - - - - 0.963 - Mlig455_038265 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=135.4]} {Human: ENSG00000090054, SPTLC1, serine palmitoyltransferase long chain base subunit 1, [RH, Score=416, Expect=2e-141]} {Mouse: ENSMUSG00000021468, Sptlc1, serine palmitoyltransferase, long chain base subunit 1, [RH, Score=431, Expect=9e-148]} {Dmel: FBgn0086532, Spt-I, Serine palmitoyltransferase subunit I, [RH, Score=396, Expect=3e-134]} {Celegans: WBGene00016020, sptl-1, Serine palmitoyltransferase 1, [RH, Score=421, Expect=6e-144]} {Smed: dd_Smed_v6_1567_0_1, dd_Smed_v6_1567_0_1, [RH, Score=458, Expect=1e-158]} {RNA1509_11888} {RNA1310_18923, RNA1509_11888} {RNA1509_11888, RNA815_5056}
7. MligTC455_32444 279 5.81 Mlig455_063483

Neo: -

Age: -

 MANBA 0.959 - - - - 0.959 - Mlig455_063483 {REF} {Length: 3695} {Pfam: Glycosyl hydrolases family 2 [PF00703.23, score=22.7]; Glycosyl hydrolases family 2, sugar binding domain [PF02837.20, score=20.4]} {Human: ENSG00000109323, MANBA, mannosidase beta, [RH, Score=462, Expect=2e-147]} {Mouse: ENSMUSG00000028164, Manba, mannosidase, beta A, lysosomal, [RH, Score=466, Expect=2e-149]} {Dmel: FBgn0037215, beta-Man, beta-Mannosidase, [RH, Score=377, Expect=1e-115]} {Celegans: WBGene00007904, C33G3.4, Probable beta-mannosidase, [RH, Score=396, Expect=5e-123]} {Smed: dd_Smed_v6_3209_0_1, dd_Smed_v6_3209_0_1, [RH, Score=368, Expect=2e-112]} {RNA1509_27646, RNA1509_41233} {RNA1310_1571.1, RNA1509_27646, RNA1509_41233} {RNA1509_27646, RNA1509_41233, RNA815_798.1}
8. MligTC455_44162 653 13.6 Mlig455_031097

Neo: -

Age: -

 TTC36 0.956 - - - 0.956 - - Mlig455_031097 {REF} {Length: 1569} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=35.5]; Tetratricopeptide repeat [PF00515.30, score=30.7]; Tetratricopeptide repeat [PF13371.8, score=29.6]; Tetratricopeptide repeat [PF13424.8, score=24.9]; Tetratricopeptide repeat [PF13428.8, score=19.3]} {Human: ENSG00000172425, TTC36, tetratricopeptide repeat domain 36, [RH, Score=166, Expect=1e-51]} {Mouse: ENSMUSG00000039438, Ttc36, tetratricopeptide repeat domain 36, [RH, Score=162, Expect=2e-50]} {Dmel: FBgn0036359, CG14105, [RH, Score=109, Expect=5e-30]} {Celegans: WBGene00009947, F52H3.5, Tetratricopeptide repeat protein 36 homolog, [RH, Score=122, Expect=3e-35]} {Smed: dd_Smed_v6_1962_0_2, dd_Smed_v6_1962_0_2, [RH, Score=126, Expect=7e-37]} {RNA1509_43044} {RNA1310_25628.1, RNA1509_43044} {RNA1509_43044, RNA815_15617}
9. MligTC455_21748 1136 23.66 Mlig455_016190

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.022/0.00025

 0.951 - - - - 0.951 - Mlig455_016190 {REF} {Length: 2131} {TRANSSPLICED} {Smed: dd_Smed_v6_8469_0_1, dd_Smed_v6_8469_0_1, [RH, Score=67.4, Expect=1e-11]} {RNA1509_11127, RNA1509_19303} {RNA1310_11899, RNA1509_11127, RNA1509_19303} {RNA1509_11127, RNA1509_19303, RNA815_4343}
10. MligTC455_19502 587 12.22 Mlig455_038124, Mlig455_039792

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_038124 {REF} {Length: 3753} {TRANSSPLICED} {Pfam: FAM181 [PF15238.8, score=25.6]} {RNA1509_28618} {RNA1310_21065, RNA1509_28618} {RNA1509_28618, RNA815_22546}

Mlig455_039792 {REF} {Length: 3471} {TRANSSPLICED} {Pfam: FAM181 [PF15238.8, score=25.7]} {RNA1509_28618} {RNA1310_21065} {RNA815_22546}
11. MligTC455_19562 303 6.31 Mlig455_051672

Neo: Int S/G2/M

Age: -

 MRPL39 0.95 - - - - 0.950 - Mlig455_051672 {REF} {Length: 2063} {TRANSSPLICED} {Pfam: TGS domain [PF02824.23, score=33.0]} {Human: ENSG00000154719, MRPL39, mitochondrial ribosomal protein L39, [RH, Score=180, Expect=7e-53]} {Mouse: ENSMUSG00000022889, Mrpl39, mitochondrial ribosomal protein L39, [RH, Score=189, Expect=1e-56]} {Dmel: FBgn0036462, mRpL39, mitochondrial ribosomal protein L39, [RH, Score=196, Expect=2e-59]} {Smed: dd_Smed_v6_7576_0_1, dd_Smed_v6_7576_0_1, [RH, Score=187, Expect=3e-56]} {RNA1509_38126, RNA1509_47333, RNA1509_9497} {RNA1310_16310, RNA1509_38126, RNA1509_47333} {RNA1509_38126, RNA1509_47333, RNA815_7406}
12. MligTC455_35201 370 7.71 Mlig455_019274

Neo: Germline

Age: -

Region-enriched R5: 3.045/0.00005

 0.95 - - - 0.950 - - Mlig455_019274 {REF} {Length: 2481} {RNA1509_43687} {RNA1310_37184, RNA1509_43687} {RNA1509_43687, RNA815_18945}

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