TomoSeq data search

Data search

Results for MligTC455_32016

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32016

177

3.69

Mlig455_031532

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.249

DNAJC7

Mlig455_031532 {REF} {Length: 4248} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=47.3]; Tetratricopeptide repeat [PF07719.19, score=39.4]; Tetratricopeptide repeat [PF00515.30, score=27.6]; Tetratricopeptide repeat [PF13371.8, score=27.4]; DnaJ domain [PF00226.33, score=26.8]; UBA/TS-N domain [PF00627.33, score=23.7]; Occluded RNA-recognition motif [PF16842.7, score=19.7]; Tetratricopeptide repeat [PF13428.8, score=19.4]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.2, Expect=8e-11]; ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.6, Expect=2e-12]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=65.1, Expect=1e-10]} {Dmel: FBgn0052423, shep, alan shepard, [Score=53.9, Expect=3e-07]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [Score=52.4, Expect=4e-07]} {RNA1509_7162} {RNA1310_9351.1, RNA1509_7162} {RNA1509_7162, RNA815_11968}

Cumulative graph for MligTC455_32016

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.428	2.501	0.38289	1.00000
RegionR2	0.656	2.501	0.54478	0.91146
RegionR3	-0.737	2.501	0.97697	1.00000
RegionR4	-0.093	2.501	0.88673	1.00000
RegionR5	1.539	2.501	0.02593	0.11673
RegionR6	0.37	2.501	0.68830	1.00000
RegionR7	0.688	2.501	0.56970	1.00000
RegionR8	2.004	2.501	0.08897	0.56438

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.298	2.501	0.99997	1.00000
RegenerationR2	1.301	2.501	0.01710	0.21390
RegenerationR3	2.29	2.501	0.00189	0.07421
RegenerationR4	2.039	2.501	0.00379	0.08433
RegenerationR5	0.575	2.501	0.26422	0.69567
RegenerationR6	1.848	2.501	0.00600	0.09417
RegenerationBL	1.273	2.501	0.10707	0.38636
RegenerationTP	-0.22	2.501	0.82412	1.00000

Genes with expression patterns similar to MligTC455_32016

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32016	177	3.69	Mlig455_031532	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.249	DNAJC7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031532 {REF} {Length: 4248} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=47.3]; Tetratricopeptide repeat [PF07719.19, score=39.4]; Tetratricopeptide repeat [PF00515.30, score=27.6]; Tetratricopeptide repeat [PF13371.8, score=27.4]; DnaJ domain [PF00226.33, score=26.8]; UBA/TS-N domain [PF00627.33, score=23.7]; Occluded RNA-recognition motif [PF16842.7, score=19.7]; Tetratricopeptide repeat [PF13428.8, score=19.4]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.2, Expect=8e-11]; ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.6, Expect=2e-12]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=65.1, Expect=1e-10]} {Dmel: FBgn0052423, shep, alan shepard, [Score=53.9, Expect=3e-07]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [Score=52.4, Expect=4e-07]} {RNA1509_7162} {RNA1310_9351.1, RNA1509_7162} {RNA1509_7162, RNA815_11968}
2.	MligTC455_32336	324	6.76	Mlig455_017728	Neo: Neoblast Age: Up-Down-Down	FXR1	1.781	-	-	0.954	-	-	0.827	Mlig455_017728 {REF} {Length: 3879} {Pfam: KH domain [PF00013.31, score=61.5]; FMRP KH0 domain [PF17904.3, score=29.7]; Agenet domain [PF05641.14, score=20.5]} {Human: ENSG00000114416, FXR1, FMR1 autosomal homolog 1, [RH, Score=271, Expect=2e-82]} {Mouse: ENSMUSG00000027680, Fxr1, fragile X mental retardation gene 1, autosomal homolog, [RH, Score=274, Expect=2e-83]} {Dmel: FBgn0028734, Fmr1, [RH, Score=233, Expect=7e-68]} {Smed: dd_Smed_v6_2105_0_1, dd_Smed_v6_2105_0_1, [RH, Score=212, Expect=3e-61]} {RNA1509_11126, RNA1509_15856, RNA1509_38590, RNA1509_4051} {RNA1310_3140.1, RNA1509_11126, RNA1509_15856, RNA1509_38590, RNA1509_4051} {RNA1509_11126, RNA1509_15856, RNA1509_38590, RNA1509_4051, RNA815_2441}
3.	MligTC455_25037	222	4.63	Mlig455_013437	Neo: - Age: -	TRIM23	1.752	-	0.788	-	-	-	0.964	Mlig455_013437 {REF} {Length: 2464} {Pfam: ADP-ribosylation factor family [PF00025.23, score=203.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=46.8]; Ras family [PF00071.24, score=42.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=30.4]; G-protein alpha subunit [PF00503.22, score=27.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.9]} {Human: ENSG00000113595, TRIM23, tripartite motif containing 23, [Score=338, Expect=1e-110]} {Mouse: ENSMUSG00000021712, Trim23, tripartite motif-containing 23, [Score=339, Expect=3e-111]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=185, Expect=9e-57]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=187, Expect=7e-58]} {Smed: dd_Smed_v6_641_0_1, dd_Smed_v6_641_0_1, [Score=182, Expect=5e-56]} {RNA1509_18100} {RNA1310_14941} {RNA815_9120}
4.	MligTC455_49811	323	6.73	Mlig455_035309	Neo: Int S/G2/M Age: -	ASCC2	1.698	-	-	0.956	-	-	0.742	Mlig455_035309 {REF} {Length: 4782} {Pfam: CUE domain [PF02845.18, score=31.9]} {Human: ENSG00000100325, ASCC2, activating signal cointegrator 1 complex subunit 2, [Score=224, Expect=2e-61]} {Mouse: ENSMUSG00000020412, Ascc2, activating signal cointegrator 1 complex subunit 2, [Score=189, Expect=9e-50]} {Dmel: FBgn0024973, CG2701, [Score=82.8, Expect=8e-16]} {RNA1509_34484, RNA1509_7044} {RNA1310_7597, RNA1509_34484} {RNA1509_34484, RNA815_1952.1}
5.	MligTC455_14707	32	0.67	Mlig455_018921	Neo: - Age: -	HS3ST4	0.965	-	-	0.965	-	-	-	Mlig455_018921 {REF} {Length: 1241} {Pfam: Sulfotransferase domain [PF00685.29, score=101.8]; Sulfotransferase family [PF13469.8, score=57.0]} {Human: ENSG00000182601, HS3ST4, heparan sulfate-glucosamine 3-sulfotransferase 4, [Score=267, Expect=2e-86]; ENSG00000153976, HS3ST3A1, heparan sulfate-glucosamine 3-sulfotransferase 3A1, [Score=265, Expect=3e-86]; ENSG00000125430, HS3ST3B1, heparan sulfate-glucosamine 3-sulfotransferase 3B1, [Score=264, Expect=5e-86]; ENSG00000162040, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [Score=259, Expect=8e-85]; ENSG00000276333, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [Score=259, Expect=8e-85]; ENSG00000122254, HS3ST2, heparan sulfate-glucosamine 3-sulfotransferase 2, [Score=257, Expect=8e-84]} {Mouse: ENSMUSG00000070407, Hs3st3b1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1, [Score=268, Expect=6e-88]; ENSMUSG00000047759, Hs3st3a1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1, [Score=265, Expect=1e-86]; ENSMUSG00000078591, Hs3st4, heparan sulfate (glucosamine) 3-O-sulfotransferase 4, [Score=264, Expect=1e-85]; ENSMUSG00000039628, Hs3st6, heparan sulfate (glucosamine) 3-O-sulfotransferase 6, [Score=263, Expect=1e-86]} {Dmel: FBgn0031005, Hs3st-B, Heparan sulfate 3-O sulfotransferase-B, [Score=275, Expect=8e-91]} {Celegans: WBGene00044303, hst-3.2, Heparan SulphoTransferase, [Score=228, Expect=1e-73]} {Smed: dd_Smed_v6_81402_0_1, dd_Smed_v6_81402_0_1, [RH, Score=153, Expect=5e-46]}
6.	MligTC455_20304	53	1.1	Mlig455_062285	Neo: - Age: -		0.963	-	-	0.963	-	-	-	Mlig455_062285 {REF} {Length: 4605} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=38.2]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.7]} {RNA1509_28642} {RNA1310_30601} {RNA815_20505}
7.	MligTC455_25525	15804	329.25	Mlig455_051198, Mlig455_062957	Neo: - Age: logFC(26M/2M)=0.399 Regeneration-upregulated BL: 1.667 Regeneration-enriched BL: 1.667	ATP5F1B	0.958	-	-	-	-	-	0.958	Mlig455_051198 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=207.4]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.25, score=79.7]} {Human: ENSG00000110955, ATP5F1B, ATP synthase F1 subunit beta, [RH, Score=858, Expect=0.0]} {Mouse: ENSMUSG00000025393, Atp5b, ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0010217, ATPsynbeta, ATP synthase, beta subunit, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00000229, atp-2, ATP synthase subunit beta, mitochondrial, [RH, Score=857, Expect=0.0]} {Smed: dd_Smed_v6_745_0_1, dd_Smed_v6_745_0_1, [RH, Score=882, Expect=0.0]} {RNA1509_1480, RNA1509_29320, RNA1509_48632} {RNA1310_12874.1, RNA1509_1480, RNA1509_29320, RNA1509_48632} {RNA1509_1480, RNA1509_29320, RNA1509_48632, RNA815_4496.1} Mlig455_062957 {REF} {Length: 2075} {TRANSSPLICED} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=207.4]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.25, score=79.7]} {Human: ENSG00000110955, ATP5F1B, ATP synthase F1 subunit beta, [RH, Score=858, Expect=0.0]} {Mouse: ENSMUSG00000025393, Atp5b, ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0010217, ATPsynbeta, ATP synthase, beta subunit, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00000229, atp-2, ATP synthase subunit beta, mitochondrial, [RH, Score=857, Expect=0.0]} {Smed: dd_Smed_v6_745_0_1, dd_Smed_v6_745_0_1, [RH, Score=882, Expect=0.0]} {RNA1509_1480, RNA1509_2121, RNA1509_39603} {RNA1310_12874.1, RNA1509_2121, RNA1509_39603} {RNA1509_2121, RNA1509_39603, RNA815_4496.1}
8.	MligTC455_17132	246	5.12	Mlig455_069284	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_069284 {REF} {Length: 6700} {Pfam: Universal stress protein family [PF00582.28, score=88.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=106, Expect=6e-30]} {RNA1509_43433} {RNA1310_48457, RNA1509_43433} {RNA1509_43433, RNA815_14530}
9.	MligTC455_45389	18	0.37	Mlig455_040503, Mlig455_057939	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_040503 {REF} {Length: 804} {RNA1509_26883} {RNA1310_27896} {RNA815_42909} Mlig455_057939 {REF} {Length: 1147} {RNA1509_26883} {RNA1310_27896} {RNA815_42909}
10.	MligTC455_39390	132	2.75	Mlig455_038805	Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 2.144/0.02134		0.951	-	-	0.951	-	-	-	Mlig455_038805 {REF} {Length: 2515} {RNA1509_29562} {RNA1310_8307, RNA1509_29562} {RNA1509_29562, RNA815_9089}

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