Data search
Results for MligTC455_39390
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39390 | 132 | 2.75 | Mlig455_038805 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 2.144/0.02134 |
Mlig455_038805 {REF} {Length: 2515} {RNA1509_29562} {RNA1310_8307, RNA1509_29562} {RNA1509_29562, RNA815_9089} |
Cumulative graph for MligTC455_39390
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.024 | 2.435 | 0.08846 | 0.64113 | |
| RegionR2 | 1.724 | 2.435 | 0.14858 | 0.48129 | |
| RegionR3 | 1.796 | 2.435 | 0.03735 | 0.33570 | |
| RegionR4 | -0.192 | 2.435 | 0.90925 | 1.00000 | |
| RegionR5 | 2.144 | 2.435 | 0.00261 | 0.02134 | |
| RegionR6 | 1.643 | 2.435 | 0.07159 | 0.49814 | |
| RegionR7 | 0.055 | 2.435 | 0.84874 | 1.00000 | |
| RegionR8 | -0.147 | 2.435 | 0.90410 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.672 | 2.435 | 0.99962 | 1.00000 | |
| RegenerationR2 | 0.541 | 2.435 | 0.46088 | 0.85274 | |
| RegenerationR3 | 0.426 | 2.435 | 0.55535 | 0.88632 | |
| RegenerationR4 | 1.017 | 2.435 | 0.22695 | 0.67540 | |
| RegenerationR5 | -0.247 | 2.435 | 0.73021 | 0.96389 | |
| RegenerationR6 | 0.441 | 2.435 | 0.55958 | 0.84514 | |
| RegenerationBL | 0.358 | 2.435 | 0.80267 | 1.00000 | |
| RegenerationTP | 0.664 | 2.435 | 0.65600 | 0.99183 |
Genes with expression patterns similar to MligTC455_39390
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39390 | 132 | 2.75 | Mlig455_038805 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 2.144/0.02134 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_038805 {REF} {Length: 2515} {RNA1509_29562} {RNA1310_8307, RNA1509_29562} {RNA1509_29562, RNA815_9089} | |
| 2. | MligTC455_39389 | 168 | 3.5 | Mlig455_038778 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.375 Region-enriched R5: 1.958/0.02473 |
4.67 | 0.999 | 0.944 | 0.980 | 0.969 | - | 0.778 | Mlig455_038778 {REF} {Length: 3837} {RNA1509_47904} {RNA1310_8307, RNA1509_47904} {RNA1509_47904, RNA815_9089} | |
| 3. | MligTC455_33301 | 346 | 7.2 | Mlig455_013435 | Neo: - Age: - Region-enriched R4: 2.102/0.01016 |
NWD1 | 0.983 | - | - | - | - | 0.983 | - | Mlig455_013435 {REF} {Length: 7733} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=43.4]; AAA ATPase domain [PF13191.8, score=38.2]; NACHT domain [PF05729.14, score=22.3]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=277, Expect=1e-74]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=289, Expect=2e-78]} {Dmel: FBgn0038397, CG10185, [Score=344, Expect=1e-95]} {Celegans: WBGene00020254, T05C3.2, [Score=344, Expect=1e-95]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [RH, Score=590, Expect=5e-178]} {RNA1509_43117, RNA1509_6546} {RNA1310_677.1, RNA1509_43117} {RNA1509_43117, RNA815_4957} |
| 4. | MligTC455_39487 | 163 | 3.4 | Mlig455_016534 | Neo: - |
0.978 | - | - | - | 0.978 | - | - | Mlig455_016534 {REF} {Length: 2067} {TRANSSPLICED} {RNA1509_28528} {RNA1310_28586} {RNA815_21057} | |
| 5. | MligTC455_51783 | 602 | 12.55 | Mlig455_010395 | Neo: - Age: Down-Up-Down |
0.972 | - | - | - | 0.972 | - | - | Mlig455_010395 {REF} {Length: 1701} {TRANSSPLICED} {RNA1509_52629, RNA1509_55785, RNA1509_8501} {RNA1310_53341, RNA1509_52629, RNA1509_55785, RNA1509_8501} {RNA1509_52629, RNA1509_55785, RNA1509_8501, RNA815_24976} | |
| 6. | MligTC455_53148 | 58 | 1.21 | Mlig455_068504 | Neo: - Age: - |
PLEKHD1 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_068504 {REF} {Length: 2294} {Pfam: PH domain [PF00169.31, score=39.5]} {Human: ENSG00000175985, PLEKHD1, pleckstrin homology and coiled-coil domain containing D1, [Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000066438, Plekhd1, pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, [Score=115, Expect=7e-28]} {Celegans: WBGene00009292, F31D4.5, Pleckstrin homology domain-containing family D member 1, [RH, Score=66.2, Expect=1e-11]} {Smed: dd_Smed_v6_3737_0_1, dd_Smed_v6_3737_0_1, [Score=129, Expect=4e-33]} {RNA1509_34767} {RNA1310_24372} {RNA815_18671} |
| 7. | MligTC455_49478 | 128 | 2.67 | Mlig455_057167 | Neo: - Age: Up-Down-Up |
SCARB2 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_057167 {REF} {Length: 3342} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=349.7]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=208, Expect=3e-60]; ENSG00000073060, SCARB1, scavenger receptor class B member 1, [Score=207, Expect=2e-59]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=210, Expect=5e-61]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=185, Expect=9e-52]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=144, Expect=4e-37]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=261, Expect=4e-80]} {RNA1509_12751, RNA1509_43859} {RNA1310_8968, RNA1509_43859} {RNA1509_43859, RNA815_16016} |
| 8. | MligTC455_20304 | 53 | 1.1 | Mlig455_062285 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_062285 {REF} {Length: 4605} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=38.2]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.7]} {RNA1509_28642} {RNA1310_30601} {RNA815_20505} | |
| 9. | MligTC455_14707 | 32 | 0.67 | Mlig455_018921 | Neo: - Age: - |
HS3ST4 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_018921 {REF} {Length: 1241} {Pfam: Sulfotransferase domain [PF00685.29, score=101.8]; Sulfotransferase family [PF13469.8, score=57.0]} {Human: ENSG00000182601, HS3ST4, heparan sulfate-glucosamine 3-sulfotransferase 4, [Score=267, Expect=2e-86]; ENSG00000153976, HS3ST3A1, heparan sulfate-glucosamine 3-sulfotransferase 3A1, [Score=265, Expect=3e-86]; ENSG00000125430, HS3ST3B1, heparan sulfate-glucosamine 3-sulfotransferase 3B1, [Score=264, Expect=5e-86]; ENSG00000162040, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [Score=259, Expect=8e-85]; ENSG00000276333, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [Score=259, Expect=8e-85]; ENSG00000122254, HS3ST2, heparan sulfate-glucosamine 3-sulfotransferase 2, [Score=257, Expect=8e-84]} {Mouse: ENSMUSG00000070407, Hs3st3b1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1, [Score=268, Expect=6e-88]; ENSMUSG00000047759, Hs3st3a1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1, [Score=265, Expect=1e-86]; ENSMUSG00000078591, Hs3st4, heparan sulfate (glucosamine) 3-O-sulfotransferase 4, [Score=264, Expect=1e-85]; ENSMUSG00000039628, Hs3st6, heparan sulfate (glucosamine) 3-O-sulfotransferase 6, [Score=263, Expect=1e-86]} {Dmel: FBgn0031005, Hs3st-B, Heparan sulfate 3-O sulfotransferase-B, [Score=275, Expect=8e-91]} {Celegans: WBGene00044303, hst-3.2, Heparan SulphoTransferase, [Score=228, Expect=1e-73]} {Smed: dd_Smed_v6_81402_0_1, dd_Smed_v6_81402_0_1, [RH, Score=153, Expect=5e-46]} |
| 10. | MligTC455_32016 | 177 | 3.69 | Mlig455_031532 | Neo: - |
DNAJC7 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_031532 {REF} {Length: 4248} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=47.3]; Tetratricopeptide repeat [PF07719.19, score=39.4]; Tetratricopeptide repeat [PF00515.30, score=27.6]; Tetratricopeptide repeat [PF13371.8, score=27.4]; DnaJ domain [PF00226.33, score=26.8]; UBA/TS-N domain [PF00627.33, score=23.7]; Occluded RNA-recognition motif [PF16842.7, score=19.7]; Tetratricopeptide repeat [PF13428.8, score=19.4]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.2, Expect=8e-11]; ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.6, Expect=2e-12]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=65.1, Expect=1e-10]} {Dmel: FBgn0052423, shep, alan shepard, [Score=53.9, Expect=3e-07]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [Score=52.4, Expect=4e-07]} {RNA1509_7162} {RNA1310_9351.1, RNA1509_7162} {RNA1509_7162, RNA815_11968} |
| 11. | MligTC455_27100 | 122 | 2.54 | Mlig455_030113 | Neo: - Age: - |
URGCP | 0.95 | - | - | - | 0.950 | - | - | Mlig455_030113 {REF} {Length: 4646} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.3]; Mediator complex subunit 25 von Willebrand factor type A [PF11265.10, score=24.3]; Dynamin family [PF00350.25, score=23.2]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=22.0]; 50S ribosome-binding GTPase [PF01926.25, score=21.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=354, Expect=1e-101]; ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=353, Expect=1e-101]} {RNA1509_16396} {RNA1310_766.1} {RNA815_6560} |
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