TomoSeq data search

Data search

Results for MligTC455_32185

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32185

276

5.75

Mlig455_010153, Mlig455_010215

Neo: -

Age: -

Region-enriched R5: 1.367/0.00654

PPP4C

Mlig455_010153 {REF} {Length: 1805} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=139.3]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=19.1]} {Human: ENSG00000149923, PPP4C, protein phosphatase 4 catalytic subunit, [RH, Score=560, Expect=0.0]} {Mouse: ENSMUSG00000030697, Ppp4c, protein phosphatase 4, catalytic subunit, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0023177, Pp4-19C, Protein phosphatase 19C, [RH, Score=538, Expect=0.0]} {Celegans: WBGene00004085, pph-4.1, Serine/threonine-protein phosphatase 4 catalytic subunit 1, [RH, Score=516, Expect=0.0]} {Smed: dd_Smed_v6_1324_0_1, dd_Smed_v6_1324_0_1, [RH, Score=526, Expect=0.0]} {RNA1509_13164, RNA1509_25488} {RNA1310_10920, RNA1509_13164, RNA1509_25488} {RNA1509_13164, RNA1509_25488, RNA815_2704.1}

Mlig455_010215 {REF} {Length: 2109} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=138.3]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=19.1]} {Human: ENSG00000149923, PPP4C, protein phosphatase 4 catalytic subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000030697, Ppp4c, protein phosphatase 4, catalytic subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0023177, Pp4-19C, Protein phosphatase 19C, [RH, Score=536, Expect=0.0]} {Celegans: WBGene00004085, pph-4.1, Serine/threonine-protein phosphatase 4 catalytic subunit 1, [RH, Score=514, Expect=0.0]} {Smed: dd_Smed_v6_1324_0_1, dd_Smed_v6_1324_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_13164} {RNA1310_10920} {RNA815_2704.1}

Cumulative graph for MligTC455_32185

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.484	3.094	0.76362	1.00000
RegionR2	0.239	3.094	0.71216	1.00000
RegionR3	0.235	3.094	0.62998	1.00000
RegionR4	-0.047	3.094	0.94806	1.00000
RegionR5	1.367	3.094	0.00057	0.00654
RegionR6	0.739	3.094	0.13120	0.65256
RegionR7	-2.371	3.094	0.02418	0.29091
RegionR8	0.322	3.094	0.70458	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.922	3.094	0.38427	1.00000
RegenerationR2	0.102	3.094	0.83987	1.00000
RegenerationR3	0.495	3.094	0.35352	0.77273
RegenerationR4	-0.472	3.094	0.40911	0.81977
RegenerationR5	-0.394	3.094	0.36787	0.77860
RegenerationR6	0.442	3.094	0.37967	0.72123
RegenerationBL	0.809	3.094	0.32847	0.69467
RegenerationTP	1.648	3.094	0.05884	0.39306

Genes with expression patterns similar to MligTC455_32185

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32185	276	5.75	Mlig455_010153, Mlig455_010215	Neo: - Age: - Region-enriched R5: 1.367/0.00654	PPP4C	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010153 {REF} {Length: 1805} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=139.3]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=19.1]} {Human: ENSG00000149923, PPP4C, protein phosphatase 4 catalytic subunit, [RH, Score=560, Expect=0.0]} {Mouse: ENSMUSG00000030697, Ppp4c, protein phosphatase 4, catalytic subunit, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0023177, Pp4-19C, Protein phosphatase 19C, [RH, Score=538, Expect=0.0]} {Celegans: WBGene00004085, pph-4.1, Serine/threonine-protein phosphatase 4 catalytic subunit 1, [RH, Score=516, Expect=0.0]} {Smed: dd_Smed_v6_1324_0_1, dd_Smed_v6_1324_0_1, [RH, Score=526, Expect=0.0]} {RNA1509_13164, RNA1509_25488} {RNA1310_10920, RNA1509_13164, RNA1509_25488} {RNA1509_13164, RNA1509_25488, RNA815_2704.1} Mlig455_010215 {REF} {Length: 2109} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=138.3]; Serine-threonine protein phosphatase N-terminal domain [PF16891.7, score=19.1]} {Human: ENSG00000149923, PPP4C, protein phosphatase 4 catalytic subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000030697, Ppp4c, protein phosphatase 4, catalytic subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0023177, Pp4-19C, Protein phosphatase 19C, [RH, Score=536, Expect=0.0]} {Celegans: WBGene00004085, pph-4.1, Serine/threonine-protein phosphatase 4 catalytic subunit 1, [RH, Score=514, Expect=0.0]} {Smed: dd_Smed_v6_1324_0_1, dd_Smed_v6_1324_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_13164} {RNA1310_10920} {RNA815_2704.1}
2.	MligTC455_08317	392	8.17	Mlig455_028420, Mlig455_028441	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.296		1.732	-	-	-	0.777	-	0.955	Mlig455_028420 {REF} {Length: 7899} {TRANSSPLICED} {Pfam: Nucleoside 2-deoxyribosyltransferase like [PF15891.7, score=119.7]} {Dmel: FBgn0003209, raw, [RH, Score=133, Expect=4e-32]} {Celegans: WBGene00007260, olrn-1, [RH, Score=87.8, Expect=5e-18]} {Smed: dd_Smed_v6_6200_0_1, dd_Smed_v6_6200_0_1, [RH, Score=201, Expect=4e-56]} {RNA1509_25351} {RNA1310_13410, RNA1509_25351} {RNA1509_25351, RNA815_29893} Mlig455_028441 {REF} {Length: 7529} {TRANSSPLICED} {Pfam: Nucleoside 2-deoxyribosyltransferase like [PF15891.7, score=119.7]} {Dmel: FBgn0003209, raw, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00007260, olrn-1, [RH, Score=87.8, Expect=5e-18]} {Smed: dd_Smed_v6_6200_0_1, dd_Smed_v6_6200_0_1, [RH, Score=200, Expect=8e-56]} {RNA1509_25351} {RNA1310_13410} {RNA815_29893}
3.	MligTC455_49850	509	10.6	Mlig455_035477	Neo: - Age: Down-Up-Down Region-enriched R5: 1.344/0.00228	NADK2	1.707	-	0.953	-	0.754	-	-	Mlig455_035477 {REF} {Length: 2586} {Pfam: ATP-NAD kinase N-terminal domain [PF01513.23, score=27.0]} {Human: ENSG00000152620, NADK2, NAD kinase 2, mitochondrial, [Score=248, Expect=4e-77]} {Mouse: ENSMUSG00000022253, Nadk2, NAD kinase 2, mitochondrial, [Score=249, Expect=3e-78]; ENSMUSG00000111527, Nadk2, NAD kinase 2, mitochondrial, [Score=237, Expect=3e-73]} {Dmel: FBgn0033373, CG8080, [Score=200, Expect=1e-59]} {Celegans: WBGene00012463, Y17G7B.10, NAD kinase 2, mitochondrial, [Score=298, Expect=3e-97]} {Smed: dd_Smed_v6_8674_0_1, dd_Smed_v6_8674_0_1, [Score=296, Expect=8e-97]} {RNA1509_15824} {RNA1310_6455.1} {RNA815_24091}
4.	MligTC455_34266	298	6.2	Mlig455_000718	Neo: Neoblast, stringent Age: Down-Up-Down Region-enriched R5: 3.400/0.00000	SEL1L	1.668	-	0.957	-	0.711	-	-	Mlig455_000718 {REF} {Length: 3660} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=93.6]; MYND finger [PF01753.20, score=38.5]; Tetratricopeptide repeat [PF00515.30, score=36.0]; Tetratricopeptide repeat [PF07719.19, score=33.5]; Tetratricopeptide repeat [PF13432.8, score=28.8]; Tetratricopeptide repeat [PF13424.8, score=28.0]; Tetratricopeptide repeat [PF13181.8, score=26.2]} {Human: ENSG00000071537, SEL1L, SEL1L, ERAD E3 ligase adaptor subunit, [Score=72.8, Expect=2e-12]} {Mouse: ENSMUSG00000020964, Sel1l, sel-1 suppressor of lin-12-like (C. elegans), [Score=72.4, Expect=2e-12]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [Score=65.1, Expect=2e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_3464_0_2, dd_Smed_v6_3464_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_34954, RNA1509_44136, RNA1509_52557, RNA1509_57871} {RNA1310_2863.2, RNA1509_34954, RNA1509_44136, RNA1509_57871} {RNA1509_34954, RNA1509_44136, RNA1509_57871, RNA815_1704}
5.	MligTC455_39238	96	2	Mlig455_041933	Neo: Int S/G2/M Age: - Region-enriched R5: 3.282/0.00957 Regeneration-upregulated BL: 6.269 Regeneration-enriched BL: 6.269	DAGLA	0.969	-	-	-	0.969	-	-	Mlig455_041933 {REF} {Length: 6084} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=187.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=132.1]; Lipase (class 3) [PF01764.27, score=39.4]; Kinase-like [PF14531.8, score=23.7]} {Human: ENSG00000134780, DAGLA, diacylglycerol lipase alpha, [RH, Score=372, Expect=1e-108]} {Mouse: ENSMUSG00000035735, Dagla, diacylglycerol lipase, alpha, [RH, Score=375, Expect=7e-110]} {Dmel: FBgn0261244, inaE, inactivation no afterpotential E, [RH, Score=414, Expect=1e-121]} {Celegans: WBGene00008956, nekl-3, Serine/threonine-protein kinase nekl-3, [Score=173, Expect=1e-47]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=172, Expect=2e-47]} {RNA1509_57837} {RNA1310_16007} {RNA815_3790.1}
6.	MligTC455_30230	57	1.19	Mlig455_040256	Neo: - Age: -	SETMAR	0.965	-	-	-	0.965	-	-	Mlig455_040256 {REF} {Length: 2702} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=30.4]; DDE superfamily endonuclease [PF13358.8, score=18.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=63.9, Expect=7e-12]} {Smed: dd_Smed_v6_47836_0_1, dd_Smed_v6_47836_0_1, [Score=50.8, Expect=3e-09]} {RNA1509_27993} {RNA1310_38710} {RNA815_7268.1}
7.	MligTC455_47729	324	6.75	Mlig455_046078	Neo: - Age: -	DHX37	0.955	-	-	-	-	-	0.955	Mlig455_046078 {REF} {Length: 3257} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=74.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=49.6]; Helicase conserved C-terminal domain [PF00271.33, score=44.3]; DEAD/DEAH box helicase [PF00270.31, score=40.6]; AAA domain [PF13604.8, score=21.5]; AAA domain [PF13245.8, score=20.0]} {Human: ENSG00000150990, DHX37, DEAH-box helicase 37, [RH, Score=615, Expect=0.0]} {Mouse: ENSMUSG00000029480, Dhx37, DEAH (Asp-Glu-Ala-His) box polypeptide 37, [RH, Score=635, Expect=0.0]} {Dmel: FBgn0001330, kz, kurz, [RH, Score=649, Expect=0.0]} {Celegans: WBGene00015525, rha-2, Putative ATP-dependent RNA helicase rha-2, [RH, Score=556, Expect=3e-180]} {Smed: dd_Smed_v6_10340_0_1, dd_Smed_v6_10340_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_10043} {RNA1310_4392} {RNA815_1308.1}
8.	MligTC455_53603	211	4.39	Mlig455_070647	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.345	HOOK3	0.955	-	-	-	-	-	0.955	Mlig455_070647 {REF} {Length: 2917} {Pfam: HOOK protein coiled-coil region [PF05622.14, score=280.3]; HOOK domain [PF19047.2, score=193.1]} {Human: ENSG00000168172, HOOK3, hook microtubule tethering protein 3, [RH, Score=384, Expect=1e-123]} {Mouse: ENSMUSG00000037234, Hook3, hook microtubule tethering protein 3, [RH, Score=377, Expect=4e-121]} {Dmel: FBgn0001202, hook, [RH, Score=257, Expect=4e-76]} {Smed: dd_Smed_v6_8306_0_1, dd_Smed_v6_8306_0_1, [RH, Score=243, Expect=2e-70]} {RNA1509_4937} {RNA1310_7268} {RNA815_3630.1}
9.	MligTC455_39775	565	11.77	Mlig455_051815	Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.729/0.00000 Region-enriched R4: 1.615/0.00542	PLK1	0.953	-	0.953	-	-	-	-	Mlig455_051815 {REF} {Length: 2862} {Pfam: POLO box duplicated region [PF00659.20, score=67.1]; Protein kinase domain [PF00069.27, score=55.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [Score=261, Expect=2e-80]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [Score=265, Expect=4e-82]} {Dmel: FBgn0003124, polo, [Score=192, Expect=6e-55]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [Score=216, Expect=1e-63]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [Score=198, Expect=2e-57]} {RNA1509_49051} {RNA1310_4665} {RNA815_3603}
10.	MligTC455_39776	1144	23.84	Mlig455_053212, Mlig455_065058	Neo: Neoblast, stringent Age: - Region-specific R5: 2.245 Region-enriched R5: 1.733/0.00000 Region-enriched R4: 1.649/0.00127	PLK1	0.953	-	0.953	-	-	-	-	Mlig455_053212 {REF} {Length: 3361} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=146.5]; POLO box duplicated region [PF00659.20, score=127.0]; Kinase-like [PF14531.8, score=33.4]; Fungal protein kinase [PF17667.3, score=30.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [RH, Score=594, Expect=0.0]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [RH, Score=614, Expect=0.0]} {Dmel: FBgn0003124, polo, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [RH, Score=561, Expect=0.0]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [RH, Score=500, Expect=2e-171]} {RNA1509_5301} {RNA1310_3713} {RNA815_3603} Mlig455_065058 {REF} {Length: 3509} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=146.5]; POLO box duplicated region [PF00659.20, score=126.5]; Kinase-like [PF14531.8, score=33.4]; Fungal protein kinase [PF17667.3, score=30.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [RH, Score=612, Expect=0.0]} {Dmel: FBgn0003124, polo, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [RH, Score=561, Expect=0.0]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [RH, Score=499, Expect=3e-171]} {RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301} {RNA1310_3713, RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301} {RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301, RNA815_3603}
11.	MligTC455_16147	1306	27.21	Mlig455_049284, Mlig455_049296, Mlig455_050629	Neo: - Age: Down-Up-Up Region-enriched R5: 1.378/0.00686		0.952	-	-	-	-	-	0.952	Mlig455_049284 {REF} {Length: 760} {TRANSSPLICED} {RNA1509_34488} {RNA1310_46478} {RNA815_23133} Mlig455_049296 {REF} {Length: 762} {TRANSSPLICED} {RNA1509_34488} {RNA1310_46478} {RNA815_23133} Mlig455_050629 {REF} {Length: 760} {TRANSSPLICED} {RNA1509_34488, RNA1509_53603} {RNA1310_46478, RNA1509_34488, RNA1509_53603} {RNA1509_34488, RNA1509_53603, RNA815_23133}

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