M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_32578

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32578 1609 33.52 Mlig455_003354

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.031/0.00384

 FAH Mlig455_003354 {REF} {Length: 2496} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=116.1]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=525, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=549, Expect=0.0]} {RNA1509_7676} {RNA1310_6042} {RNA815_4884.1}

Cumulative graph for MligTC455_32578

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.507 5.283 0.57394 1.00000
RegionR2 -0.588 5.283 0.17797 0.52753
RegionR3 0.256 5.283 0.43677 0.95393
RegionR4 -0.182 5.283 0.64023 0.94578
RegionR5 1.031 5.283 0.00029 0.00384
RegionR6 0.443 5.283 0.18492 0.75047
RegionR7 0.097 5.283 0.81949 1.00000
RegionR8 -0.55 5.283 0.35940 0.99367

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.607 5.283 0.60391 1.00000
RegenerationR2 0.195 5.283 0.61379 0.92067
RegenerationR3 0.553 5.283 0.15695 0.58837
RegenerationR4 0.785 5.283 0.04320 0.33478
RegenerationR5 0.239 5.283 0.50260 0.85979
RegenerationR6 0.882 5.283 0.01951 0.17239
RegenerationBL 1.14 5.283 0.00443 0.06068
RegenerationTP 0.76 5.283 0.12086 0.52988


Genes with expression patterns similar to MligTC455_32578

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32578 1609 33.52 Mlig455_003354

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.031/0.00384

 FAH 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_003354 {REF} {Length: 2496} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=116.1]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=525, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=549, Expect=0.0]} {RNA1509_7676} {RNA1310_6042} {RNA815_4884.1}
2. MligTC455_32577 2160 45 Mlig455_003155

Neo: -

Age: Down-Up-Down

 FAH 5.626 0.950 0.931 0.846 0.978 0.994 0.927 Mlig455_003155 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=115.3]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=548, Expect=0.0]} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1310_6042, RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676, RNA815_4884.1}
3. MligTC455_24251 4643 96.72 Mlig455_000145

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.542/0.00021
Region-enriched R5: 1.049/0.00304

Regeneration-upregulated BL: 1.281

Regeneration-enriched BL: 1.281

 HSPE1 2.689 0.809 - - 0.908 0.972 - Mlig455_000145 {REF} {Length: 694} {TRANSSPLICED} {Pfam: Chaperonin 10 Kd subunit [PF00166.23, score=88.7]} {Human: ENSG00000115541, HSPE1, heat shock protein family E (Hsp10) member 1, [RH, Score=121, Expect=1e-36]} {Mouse: ENSMUSG00000073676, Hspe1, heat shock protein 1 (chaperonin 10), [RH, Score=122, Expect=5e-37]; ENSMUSG00000117621, AC117239.2, novel protein similar to Hspe1, [RH, Score=119, Expect=8e-36]} {Dmel: FBgn0036334, CG11267, [RH, Score=115, Expect=9e-35]} {Celegans: WBGene00021248, Y22D7AL.10, [RH, Score=117, Expect=2e-35]} {Smed: dd_Smed_v6_421_0_1, dd_Smed_v6_421_0_1, [RH, Score=124, Expect=2e-38]} {RNA1509_1412, RNA1509_17704} {RNA1310_51233.2, RNA1509_1412, RNA1509_17704} {RNA1509_1412, RNA1509_17704, RNA815_25861}
4. MligTC455_24252 4573 95.27 Mlig455_067732

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.496/0.00030
Region-enriched R5: 1.039/0.00300

Regeneration-upregulated BL: 1.393

Regeneration-enriched BL: 1.393

 HSPE1 2.689 0.809 - - 0.899 0.981 - Mlig455_067732 {REF} {Length: 695} {TRANSSPLICED} {Pfam: Chaperonin 10 Kd subunit [PF00166.23, score=87.4]} {Human: ENSG00000115541, HSPE1, heat shock protein family E (Hsp10) member 1, [RH, Score=119, Expect=1e-35]} {Mouse: ENSMUSG00000073676, Hspe1, heat shock protein 1 (chaperonin 10), [RH, Score=119, Expect=5e-36]; ENSMUSG00000117621, AC117239.2, novel protein similar to Hspe1, [RH, Score=116, Expect=7e-35]} {Dmel: FBgn0036334, CG11267, [RH, Score=113, Expect=8e-34]} {Celegans: WBGene00021248, Y22D7AL.10, [RH, Score=115, Expect=1e-34]} {Smed: dd_Smed_v6_421_0_1, dd_Smed_v6_421_0_1, [RH, Score=122, Expect=1e-37]} {RNA1509_17704} {RNA1310_51233.2} {RNA815_25861}
5. MligTC455_49668 7165 149.26 Mlig455_041532, Mlig455_069392

Neo: -

Age: logFC(26M/2M)=0.412

Region-enriched R6: 2.891/0.00000
Region-enriched R5: 1.736/0.00352

 2.617 - - - 0.856 0.965 0.796

Mlig455_041532 {REF} {Length: 1250} {Pfam: Thioredoxin [PF00085.22, score=32.4]} {RNA1509_12738} {RNA1310_35985.2} {RNA815_17683}

Mlig455_069392 {REF} {Length: 1250} {Pfam: Thioredoxin [PF00085.22, score=32.4]} {RNA1509_12738, RNA1509_17914, RNA1509_46388} {RNA1310_35985.2, RNA1509_12738, RNA1509_17914, RNA1509_46388} {RNA1509_12738, RNA1509_17914, RNA1509_46388, RNA815_17683}
6. MligTC455_37896 4590 95.62 Mlig455_048970

Neo: -

Age: logFC(26M/2M)=0.339

Region-enriched R4: 1.540/0.00001

 2.551 0.747 - - 0.952 0.852 - Mlig455_048970 {REF} {Length: 1062} {Smed: dd_Smed_v6_951_0_1, dd_Smed_v6_951_0_1, [RH, Score=59.7, Expect=5e-13]} {RNA1509_1589} {RNA1310_12812.1} {RNA815_14113}
7. MligTC455_22191 983 20.49 Mlig455_037426, Mlig455_037496

Neo: -

Age: -

Region-enriched R5: 1.310/0.00527

 1.849 - 0.959 - - 0.890 -

Mlig455_037426 {REF} {Length: 1387} {TRANSSPLICED} {RNA1509_21163, RNA1509_26312} {RNA1310_42598, RNA1509_21163, RNA1509_26312} {RNA1509_21163, RNA1509_26312, RNA815_21773}

Mlig455_037496 {REF} {Length: 642} {TRANSSPLICED} {RNA1509_21163} {RNA1310_73990} {RNA815_21773}
8. MligTC455_25706 119 2.48 Mlig455_021539

Neo: -

Age: -

Region-enriched R6: 3.883/0.02463

 LAMB1 1.811 - - - 0.968 0.843 - Mlig455_021539 {REF} {Length: 6128} {Pfam: Laminin EGF domain [PF00053.26, score=314.9]; Laminin N-terminal (Domain VI) [PF00055.19, score=163.3]; Crescentin protein [PF19220.2, score=26.0]} {Human: ENSG00000091136, LAMB1, laminin subunit beta 1, [RH, Score=853, Expect=0.0]; ENSG00000172037, LAMB2, laminin subunit beta 2, [RH, Score=825, Expect=0.0]} {Mouse: ENSMUSG00000002900, Lamb1, laminin B1, [RH, Score=856, Expect=0.0]; ENSMUSG00000052911, Lamb2, laminin, beta 2, [RH, Score=814, Expect=0.0]} {Dmel: FBgn0261800, LanB1, [RH, Score=856, Expect=0.0]} {Celegans: WBGene00002247, lam-1, LAMinin related. See also lmb, [RH, Score=852, Expect=0.0]} {Smed: dd_Smed_v6_6093_0_1, dd_Smed_v6_6093_0_1, [RH, Score=429, Expect=1e-123]} {RNA1509_3908} {RNA1310_668.1} {RNA815_1065}
9. MligTC455_21685 642 13.38 Mlig455_016564

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.464

 1.794 - - - 0.965 0.829 - Mlig455_016564 {REF} {Length: 1396} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13428.8, score=28.9]; Tetratricopeptide repeat [PF07719.19, score=25.8]} {Smed: dd_Smed_v6_438_0_1, dd_Smed_v6_438_0_1, [RH, Score=104, Expect=5e-25]} {RNA1509_14239, RNA1509_58624} {RNA1310_24039.2, RNA1509_58624} {RNA1509_58624, RNA815_28568}
10. MligTC455_32254 4780 99.59 Mlig455_063564

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.209

Region-enriched R4: 1.055/0.00127

 VAMP1 1.663 0.701 - - 0.962 - - Mlig455_063564 {REF} {Length: 1900} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=96.7]; Rifin [PF02009.18, score=20.7]} {Human: ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=66.2, Expect=2e-14]; ENSG00000263620, AC129492.3, novel protein, [Score=65.9, Expect=2e-14]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=65.5, Expect=3e-14]; ENSG00000118640, VAMP8, vesicle associated membrane protein 8, [Score=63.9, Expect=8e-14]} {Mouse: ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=67.4, Expect=4e-15]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.0, Expect=1e-14]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [Score=82.8, Expect=4e-21]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.1, Expect=2e-18]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=74.7, Expect=6e-18]} {RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781} {RNA1310_6156.1, RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781} {RNA1509_1399, RNA1509_14159, RNA1509_14803, RNA1509_4160, RNA1509_4781, RNA815_7965}
11. MligTC455_23317 6386 133.04 Mlig455_030502

Neo: -

Age: logFC(26M/2M)=0.152

 IFI30 1.658 - - 0.700 0.958 - - Mlig455_030502 {REF} {Length: 1804} {Pfam: Gamma interferon inducible lysosomal thiol reductase (GILT) [PF03227.18, score=106.5]; Saposin A-type domain [PF02199.17, score=21.0]} {Human: ENSG00000216490, IFI30, IFI30, lysosomal thiol reductase, [RH, Score=142, Expect=1e-40]} {Mouse: ENSMUSG00000110777, Ifi30, interferon gamma inducible protein 30, [Score=114, Expect=4e-30]} {Dmel: FBgn0038149, GILT1, Gamma-interferon-inducible lysosomal thiol reductase 1, [RH, Score=103, Expect=2e-26]} {Celegans: WBGene00009514, F37H8.5, GILT-like protein F37H8.5, [RH, Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_2024_0_1, dd_Smed_v6_2024_0_1, [RH, Score=129, Expect=1e-36]} {RNA1509_1665, RNA1509_42982, RNA1509_8932} {RNA1310_6680.2, RNA1509_1665, RNA1509_42982} {RNA1509_1665, RNA1509_42982, RNA815_10821.1}
12. MligTC455_32253 4695 97.82 Mlig455_028199

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.082/0.00093

 VAMP1 0.962 - - - 0.962 - - Mlig455_028199 {REF} {Length: 1862} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=96.7]; Rifin [PF02009.18, score=20.7]} {Human: ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=66.2, Expect=2e-14]; ENSG00000263620, AC129492.3, novel protein, [Score=65.9, Expect=2e-14]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=65.5, Expect=3e-14]; ENSG00000118640, VAMP8, vesicle associated membrane protein 8, [Score=63.9, Expect=8e-14]} {Mouse: ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=67.4, Expect=4e-15]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.0, Expect=1e-14]} {Dmel: FBgn0003660, Syb, Synaptobrevin, [Score=82.8, Expect=4e-21]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=75.1, Expect=2e-18]} {Smed: dd_Smed_v6_9710_0_1, dd_Smed_v6_9710_0_1, [Score=74.7, Expect=6e-18]} {RNA1509_4781} {RNA1310_6156.1} {RNA815_7965}
13. MligTC455_35680 155 3.23 Mlig455_044054

Neo: Irradiation

Age: logFC(26M/2M)=0.267

Region-enriched R5: 2.736/0.00014

 DZIP3 0.96 - 0.960 - - - - Mlig455_044054 {REF} {Length: 3771} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=40.1]; RING-H2 zinc finger domain [PF12678.9, score=32.9]; RING-like zinc finger [PF17123.7, score=28.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.4]; zinc-RING finger domain [PF14634.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.6]} {Human: ENSG00000198919, DZIP3, DAZ interacting zinc finger protein 3, [RH, Score=59.7, Expect=5e-09]} {Mouse: ENSMUSG00000064061, Dzip3, DAZ interacting protein 3, zinc finger, [RH, Score=58.2, Expect=9e-09]} {Dmel: FBgn0039875, sip3, septin interacting protein 3, [Score=51.6, Expect=7e-07]} {Celegans: WBGene00012194, toe-4, Target Of ERK kinase MPK-1, [RH, Score=55.5, Expect=3e-08]} {Smed: dd_Smed_v6_7689_0_1, dd_Smed_v6_7689_0_1, [Score=54.3, Expect=6e-08]} {RNA1509_9243} {RNA1310_6137, RNA1509_9243} {RNA1509_9243, RNA815_4841.1}
14. MligTC455_22219 1208 25.16 Mlig455_039593

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.518/0.00237
Region-enriched R5: 1.255/0.00126

 NAA11 0.958 - - - - 0.958 - Mlig455_039593 {REF} {Length: 486} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=63.6]; Acetyltransferase (GNAT) domain [PF13673.9, score=46.9]; Acetyltransferase (GNAT) domain [PF13508.9, score=38.7]; FR47-like protein [PF08445.12, score=30.5]} {Human: ENSG00000156269, NAA11, N(alpha)-acetyltransferase 11, NatA catalytic subunit, [RH, Score=268, Expect=8e-92]; ENSG00000102030, NAA10, N(alpha)-acetyltransferase 10, NatA catalytic subunit, [RH, Score=268, Expect=6e-92]} {Mouse: ENSMUSG00000031388, Naa10, N(alpha)-acetyltransferase 10, NatA catalytic subunit, [RH, Score=269, Expect=2e-92]; ENSMUSG00000046000, Naa11, N(alpha)-acetyltransferase 11, NatA catalytic subunit, [RH, Score=268, Expect=3e-92]; ENSMUSG00000024571, Gm16286, predicted gene 16286, [RH, Score=266, Expect=2e-91]} {Dmel: FBgn0263251, vnc, variable nurse cells, [RH, Score=238, Expect=9e-81]} {Celegans: WBGene00000923, daf-31, N-alpha-acetyltransferase daf-31, [RH, Score=244, Expect=2e-83]} {Smed: dd_Smed_v6_2570_0_1, dd_Smed_v6_2570_0_1, [RH, Score=277, Expect=1e-96]} {RNA1509_31382} {RNA1310_35599.2} {RNA815_22455}
15. MligTC455_19697 1053 21.93 Mlig455_057993

Neo: -

Age: -

 ALDH5A1 0.956 - - - - - 0.956 Mlig455_057993 {REF} {Length: 2552} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=540.1]} {Human: ENSG00000112294, ALDH5A1, aldehyde dehydrogenase 5 family member A1, [RH, Score=479, Expect=3e-165]} {Mouse: ENSMUSG00000035936, Aldh5a1, aldhehyde dehydrogenase family 5, subfamily A1, [RH, Score=510, Expect=1e-177]} {Dmel: FBgn0039349, Ssadh, Succinic semialdehyde dehydrogenase, [RH, Score=491, Expect=2e-170]} {Celegans: WBGene00000113, alh-7, ALdehyde deHydrogenase, [RH, Score=395, Expect=2e-133]} {Smed: dd_Smed_v6_8292_0_1, dd_Smed_v6_8292_0_1, [RH, Score=441, Expect=5e-151]} {RNA1509_33545, RNA1509_37104, RNA1509_51041, RNA1509_57730} {RNA1310_16721.1, RNA1509_33545, RNA1509_37104, RNA1509_51041} {RNA1509_33545, RNA1509_37104, RNA1509_51041, RNA815_12649.1}
16. MligTC455_38945 3598 74.95 Mlig455_019505

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.260

Region-enriched R7: 1.955/0.00000

 HSP90B1 0.954 - - - - 0.954 - Mlig455_019505 {REF} {Length: 4318} {Pfam: Hsp90 protein [PF00183.20, score=709.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=49.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.1]} {Human: ENSG00000166598, HSP90B1, heat shock protein 90 beta family member 1, [RH, Score=894, Expect=0.0]} {Mouse: ENSMUSG00000020048, Hsp90b1, heat shock protein 90, beta (Grp94), member 1, [RH, Score=909, Expect=0.0]} {Dmel: FBgn0039562, Gp93, Glycoprotein 93, [RH, Score=885, Expect=0.0]} {Celegans: WBGene00011480, enpl-1, Endoplasmin homolog, [RH, Score=845, Expect=0.0]} {Smed: dd_Smed_v6_758_1_1, dd_Smed_v6_758_1_1, [RH, Score=979, Expect=0.0]} {RNA1509_34044, RNA1509_37551, RNA1509_537} {RNA1310_2681, RNA1509_34044, RNA1509_37551} {RNA1509_34044, RNA1509_37551, RNA815_1298.2}
17. MligTC455_35851 84 1.74 Mlig455_060481

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_060481 {REF} {Length: 2116} {RNA1509_15445} {RNA1310_19911} {RNA815_6089}
18. MligTC455_34701 5732 119.42 Mlig455_044421, Mlig455_044456, Mlig455_046748

Neo: -

Age: -

 ABAT 0.95 - - - 0.950 - -

Mlig455_044421 {REF} {Length: 2235} {Pfam: Aminotransferase class-III [PF00202.23, score=330.6]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=497, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=2e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_15533, RNA1509_4088, RNA1509_40896} {RNA1310_12178, RNA1509_4088, RNA1509_40896} {RNA1509_4088, RNA1509_40896, RNA815_4296}

Mlig455_044456 {REF} {Length: 2252} {Pfam: Aminotransferase class-III [PF00202.23, score=332.7]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=498, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=1e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=529, Expect=0.0]} {RNA1509_39024, RNA1509_58685} {RNA1310_12178, RNA1509_39024, RNA1509_58685} {RNA1509_39024, RNA1509_58685, RNA815_4296}

Mlig455_046748 {REF} {Length: 2206} {Pfam: Aminotransferase class-III [PF00202.23, score=248.5]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [Score=398, Expect=9e-136]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [Score=397, Expect=2e-135]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [Score=426, Expect=5e-147]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [Score=389, Expect=5e-133]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [Score=431, Expect=1e-149]} {RNA1509_15533, RNA1509_20161, RNA1509_39024} {RNA1310_12178, RNA1509_15533, RNA1509_20161} {RNA1509_15533, RNA1509_20161, RNA815_4296}
19. MligTC455_44008 5188 108.09 Mlig455_028358

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R4: 1.022/0.00000

 PSMB6 0.95 - - - - 0.950 - Mlig455_028358 {REF} {Length: 1145} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=146.4]} {Human: ENSG00000142507, PSMB6, proteasome subunit beta 6, [RH, Score=251, Expect=3e-84]} {Mouse: ENSMUSG00000018286, Psmb6, proteasome (prosome, macropain) subunit, beta type 6, [RH, Score=256, Expect=2e-86]} {Dmel: FBgn0010590, Prosbeta1, Proteasome beta1 subunit, [RH, Score=221, Expect=4e-73]} {Celegans: WBGene00003947, pbs-1, Proteasome subunit beta type, [RH, Score=224, Expect=4e-74]} {Smed: dd_Smed_v6_1583_0_1, dd_Smed_v6_1583_0_1, [RH, Score=221, Expect=2e-73]} {RNA1509_14305, RNA1509_1664} {RNA1310_31285.2, RNA1509_14305, RNA1509_1664} {RNA1509_14305, RNA1509_1664, RNA815_14095}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA