TomoSeq data search

Data search

Results for MligTC455_32831

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32831

609

12.68

Mlig455_026495

Neo: -

Age: -

POLR3B

Mlig455_026495 {REF} {Length: 3723} {TRANSSPLICED} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=410.9]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=110.5]; RNA polymerase beta subunit [PF04563.17, score=94.6]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=77.8]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=77.5]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=75.0]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=39.2]} {Human: ENSG00000013503, POLR3B, RNA polymerase III subunit B, [RH, Score=1358, Expect=0.0]} {Mouse: ENSMUSG00000034453, Polr3b, polymerase (RNA) III (DNA directed) polypeptide B, [RH, Score=1357, Expect=0.0]} {Dmel: FBgn0004463, RpIII128, RNA polymerase III 128kD subunit, [RH, Score=1223, Expect=0.0]} {Celegans: WBGene00017300, rpc-2, DNA-directed RNA polymerase subunit beta, [RH, Score=1212, Expect=0.0]} {Smed: dd_Smed_v6_5517_0_1, dd_Smed_v6_5517_0_1, [RH, Score=864, Expect=0.0]} {RNA1509_14101, RNA1509_28477} {RNA1310_2096, RNA1509_14101, RNA1509_28477} {RNA1509_14101, RNA1509_28477, RNA815_877.1}

Cumulative graph for MligTC455_32831

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.912	4.071	0.04305	0.50190
RegionR2	1.077	4.071	0.18671	0.54002
RegionR3	0.578	4.071	0.49796	0.99399
RegionR4	1.044	4.071	0.16980	0.43290
RegionR5	1.266	4.071	0.04157	0.16400
RegionR6	0.756	4.071	0.35824	0.94238
RegionR7	1.549	4.071	0.03918	0.37950
RegionR8	0.642	4.071	0.55467	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.461	4.071	0.99995	1.00000
RegenerationR2	0.231	4.071	0.52687	0.88266
RegenerationR3	1.15	4.071	0.00608	0.14075
RegenerationR4	0.238	4.071	0.56602	0.89927
RegenerationR5	0.054	4.071	0.88176	1.00000
RegenerationR6	0.772	4.071	0.06595	0.32228
RegenerationBL	0.288	4.071	0.57615	0.92919
RegenerationTP	-0.518	4.071	0.41982	0.84402

Genes with expression patterns similar to MligTC455_32831

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32831	609	12.68	Mlig455_026495	Neo: - Age: -	POLR3B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026495 {REF} {Length: 3723} {TRANSSPLICED} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=410.9]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=110.5]; RNA polymerase beta subunit [PF04563.17, score=94.6]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=77.8]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=77.5]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=75.0]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=39.2]} {Human: ENSG00000013503, POLR3B, RNA polymerase III subunit B, [RH, Score=1358, Expect=0.0]} {Mouse: ENSMUSG00000034453, Polr3b, polymerase (RNA) III (DNA directed) polypeptide B, [RH, Score=1357, Expect=0.0]} {Dmel: FBgn0004463, RpIII128, RNA polymerase III 128kD subunit, [RH, Score=1223, Expect=0.0]} {Celegans: WBGene00017300, rpc-2, DNA-directed RNA polymerase subunit beta, [RH, Score=1212, Expect=0.0]} {Smed: dd_Smed_v6_5517_0_1, dd_Smed_v6_5517_0_1, [RH, Score=864, Expect=0.0]} {RNA1509_14101, RNA1509_28477} {RNA1310_2096, RNA1509_14101, RNA1509_28477} {RNA1509_14101, RNA1509_28477, RNA815_877.1}
2.	MligTC455_51302	430	8.96	Mlig455_027390	Neo: - Age: Down-Down-Up Region-enriched R5: 1.407/0.01233	TIMM22	1.808	0.852	-	-	-	-	0.956	Mlig455_027390 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Tim17/Tim22/Tim23/Pmp24 family [PF02466.21, score=94.4]} {Human: ENSG00000177370, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000278501, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000277649, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]} {Mouse: ENSMUSG00000020843, Timm22, translocase of inner mitochondrial membrane 22, [RH, Score=144, Expect=3e-43]} {Dmel: FBgn0051229, CG31229, [RH, Score=115, Expect=3e-32]} {Celegans: WBGene00008164, C47G2.3, Mitochondrial import inner membrane translocase subunit tim-22, [RH, Score=133, Expect=7e-39]} {Smed: dd_Smed_v6_9333_0_1, dd_Smed_v6_9333_0_1, [RH, Score=177, Expect=3e-56]} {RNA1509_23050, RNA1509_32512, RNA1509_50982} {RNA1310_46537, RNA1509_23050, RNA1509_32512, RNA1509_50982} {RNA1509_23050, RNA1509_32512, RNA1509_50982, RNA815_22653}
3.	MligTC455_33216	637	13.26	Mlig455_031686	Neo: - Age: -	HGSNAT	0.971	-	-	-	-	-	0.971	Mlig455_031686 {REF} {Length: 2917} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5009) [PF16401.7, score=32.5]; Heparan-alpha-glucosaminide N-acetyltransferase, catalytic [PF07786.14, score=20.2]} {Human: ENSG00000165102, HGSNAT, heparan-alpha-glucosaminide N-acetyltransferase, [Score=172, Expect=2e-47]} {Mouse: ENSMUSG00000037260, Hgsnat, heparan-alpha-glucosaminide N-acetyltransferase, [Score=177, Expect=2e-49]} {Dmel: FBgn0029737, CG6903, [Score=125, Expect=2e-31]} {Smed: dd_Smed_v6_1884_1_3, dd_Smed_v6_1884_1_3, [Score=150, Expect=5e-41]} {RNA1509_13396} {RNA1310_8198.1} {RNA815_2728.1}
4.	MligTC455_52594	147	3.07	Mlig455_066168	Neo: - Age: -	DLG5	0.967	-	-	-	-	0.967	-	Mlig455_066168 {REF} {Length: 4401} {Pfam: PDZ domain [PF17820.3, score=35.8]; PDZ domain [PF00595.26, score=34.8]; YL1 nuclear protein [PF05764.15, score=18.9]} {Human: ENSG00000151208, DLG5, discs large MAGUK scaffold protein 5, [Score=59.7, Expect=2e-08]; ENSG00000274429, DLG5, discs large MAGUK scaffold protein 5, [Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000021782, Dlg5, discs large MAGUK scaffold protein 5, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_2209_0_1, dd_Smed_v6_2209_0_1, [Score=48.5, Expect=1e-05]} {RNA1310_22171} {RNA815_9664}
5.	MligTC455_39375	773	16.1	Mlig455_052642, Mlig455_065712	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_052642 {REF} {Length: 4107} {RNA1509_9151} {RNA1310_2304} {RNA815_15356} Mlig455_065712 {REF} {Length: 4103} {RNA1509_39258, RNA1509_9151} {RNA1310_2304, RNA1509_39258} {RNA1509_39258, RNA815_15356}
6.	MligTC455_34249	231	4.81	Mlig455_062909	Neo: Int S/G2/M Age: Up-Down-Down	YTHDC2	0.955	0.955	-	-	-	-	-	Mlig455_062909 {REF} {Length: 6356} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=67.8]; Helicase conserved C-terminal domain [PF00271.33, score=48.5]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=39.3]; R3H domain [PF01424.24, score=36.0]; AAA domain [PF13245.8, score=29.1]; KaiC [PF06745.15, score=20.4]} {Human: ENSG00000047188, YTHDC2, YTH domain containing 2, [RH, Score=917, Expect=0.0]} {Mouse: ENSMUSG00000034653, Ythdc2, YTH domain containing 2, [RH, Score=928, Expect=0.0]} {Dmel: FBgn0004581, bgcn, benign gonial cell neoplasm, [RH, Score=259, Expect=5e-70]} {Celegans: WBGene00009922, F52B5.3, [RH, Score=212, Expect=4e-55]} {Smed: dd_Smed_v6_4815_0_1, dd_Smed_v6_4815_0_1, [Score=214, Expect=7e-56]} {RNA1509_15401} {RNA1310_1583.1} {RNA815_6960}
7.	MligTC455_22993	298	6.21	Mlig455_008951	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_008951 {REF} {Length: 3050} {TRANSSPLICED} {RNA1509_13451, RNA1509_54489} {RNA1310_12990, RNA1509_54489} {RNA1509_54489, RNA815_15606}
8.	MligTC455_40163	637	13.28	Mlig455_020207	Neo: - Age: -	MRPL49	0.954	-	-	-	-	-	0.954	Mlig455_020207 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Mitochondrial large subunit ribosomal protein (Img2) [PF05046.16, score=70.2]} {Human: ENSG00000149792, MRPL49, mitochondrial ribosomal protein L49, [RH, Score=87.0, Expect=4e-21]} {Mouse: ENSMUSG00000007338, Mrpl49, mitochondrial ribosomal protein L49, [RH, Score=96.3, Expect=1e-24]} {Dmel: FBgn0030433, mRpL49, mitochondrial ribosomal protein L49, [RH, Score=82.4, Expect=2e-19]} {Celegans: WBGene00011247, mrpl-49, Probable 39S ribosomal protein L49, mitochondrial, [RH, Score=72.8, Expect=7e-16]} {Smed: dd_Smed_v6_5783_1_1, dd_Smed_v6_5783_1_1, [RH, Score=104, Expect=5e-28]} {RNA1509_13816, RNA1509_23134, RNA1509_38178, RNA1509_46731} {RNA1310_20736, RNA1509_13816, RNA1509_23134, RNA1509_38178, RNA1509_46731} {RNA1509_13816, RNA1509_23134, RNA1509_38178, RNA1509_46731, RNA815_39575}
9.	MligTC455_52592	831	17.31	Mlig455_066163, Mlig455_066164, Mlig455_066165, Mlig455_066166, Mlig455_066167	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_066163 {REF} {Length: 958} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636} Mlig455_066164 {REF} {Length: 956} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636} Mlig455_066165 {REF} {Length: 1022} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636} Mlig455_066166 {REF} {Length: 956} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22412} {RNA1310_78464} {RNA815_47636} Mlig455_066167 {REF} {Length: 954} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17465} {RNA1310_78464} {RNA815_47636}
10.	MligTC455_16987	371	7.72	Mlig455_007997	Neo: - Age: Down-Down-Up	IDI1	0.951	-	-	-	-	-	0.951	Mlig455_007997 {REF} {Length: 1656} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=51.0]} {Human: ENSG00000067064, IDI1, isopentenyl-diphosphate delta isomerase 1, [RH, Score=155, Expect=1e-46]} {Mouse: ENSMUSG00000058258, Idi1, isopentenyl-diphosphate delta isomerase, [RH, Score=160, Expect=8e-48]} {Dmel: FBgn0038876, CG5919, [RH, Score=152, Expect=2e-45]} {Celegans: WBGene00019460, idi-1, Isopentenyl Diphosphate Isomerase; Isopentenyl-diphosphate isomerase, [RH, Score=127, Expect=9e-36]} {Smed: dd_Smed_v6_3910_0_1, dd_Smed_v6_3910_0_1, [RH, Score=150, Expect=1e-44]} {RNA1509_24112} {RNA1310_18905, RNA1509_24112} {RNA1509_24112, RNA815_31536}
11.	MligTC455_34646	1486	30.96	Mlig455_033963	Neo: - Age: logFC(26M/2M)=-0.538		0.951	-	-	-	-	0.951	-	Mlig455_033963 {REF} {Length: 2428} {RNA1509_12592, RNA1509_39439, RNA1509_4446} {RNA1310_20682, RNA1509_12592, RNA1509_39439, RNA1509_4446} {RNA1509_12592, RNA1509_39439, RNA1509_4446, RNA815_12675}
12.	MligTC455_29382	141	2.94	Mlig455_032367, Mlig455_068516	Neo: - Age: Up-Down-Down		0.95	-	-	-	-	-	0.950	Mlig455_032367 {REF} {Length: 11082} {RNA1509_34218, RNA1509_44206} {RNA1310_18727, RNA1509_34218} {RNA1509_34218, RNA815_16176.1} Mlig455_068516 {REF} {Length: 2460} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}

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