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Results for MligTC455_39375

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39375 773 16.10 Mlig455_052642, Mlig455_065712

Neo: -

Age: -

Mlig455_052642 {REF} {Length: 4107} {RNA1509_9151} {RNA1310_2304} {RNA815_15356}

Mlig455_065712 {REF} {Length: 4103} {RNA1509_39258, RNA1509_9151} {RNA1310_2304, RNA1509_39258} {RNA1509_39258, RNA815_15356}

Cumulative graph for MligTC455_39375

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.456 4.307 0.67184 1.00000
RegionR2 0.999 4.307 0.03927 0.23006
RegionR3 0.785 4.307 0.03350 0.31666
RegionR4 0.591 4.307 0.18432 0.45624
RegionR5 -0.208 4.307 0.57988 0.93861
RegionR6 0.238 4.307 0.55091 1.00000
RegionR7 -1.113 4.307 0.05150 0.43672
RegionR8 -0.837 4.307 0.20046 0.79808

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.579 4.307 0.39105 1.00000
RegenerationR2 0.247 4.307 0.51349 0.87722
RegenerationR3 -0.389 4.307 0.37005 0.78395
RegenerationR4 -0.388 4.307 0.39692 0.81115
RegenerationR5 0.15 4.307 0.73042 0.96406
RegenerationR6 -0.399 4.307 0.38239 0.72306
RegenerationBL 0.384 4.307 0.48691 0.85210
RegenerationTP -1.327 4.307 0.09887 0.49044


Genes with expression patterns similar to MligTC455_39375

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39375 773 16.1 Mlig455_052642, Mlig455_065712

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_052642 {REF} {Length: 4107} {RNA1509_9151} {RNA1310_2304} {RNA815_15356}

Mlig455_065712 {REF} {Length: 4103} {RNA1509_39258, RNA1509_9151} {RNA1310_2304, RNA1509_39258} {RNA1509_39258, RNA815_15356}
2. MligTC455_44816 288 6 Mlig455_063085

Neo: -

Age: logFC(26M/2M)=-0.391

KIAA0556 1.763 - - 0.810 - 0.953 - Mlig455_063085 {REF} {Length: 5300} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4457) [PF14652.8, score=569.4]} {Human: ENSG00000047578, KIAA0556, KIAA0556, [RH, Score=573, Expect=6e-178]} {Mouse: ENSMUSG00000032743, D430042O09Rik, RIKEN cDNA D430042O09 gene, [RH, Score=584, Expect=0.0]} {Celegans: WBGene00019395, K04F10.2, Protein KIAA0556 homolog, [RH, Score=271, Expect=2e-78]} {Smed: dd_Smed_v6_10945_0_1, dd_Smed_v6_10945_0_1, [RH, Score=539, Expect=4e-169]} {RNA1509_53875} {RNA1310_1299.2} {RNA815_6090}
3. MligTC455_20952 2067 43.07 Mlig455_007960, Mlig455_008105, Mlig455_015591

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.359

COL24A1 1.672 - - - 0.722 0.950 -

Mlig455_007960 {REF} {Length: 5756} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=117.0]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=390, Expect=1e-112]} {Mouse: ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=359, Expect=5e-102]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=369, Expect=1e-105]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=324, Expect=4e-91]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=485, Expect=3e-149]} {RNA1509_2270} {RNA1310_2141} {RNA815_599}

Mlig455_008105 {REF} {Length: 4564} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=118.1]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=412, Expect=2e-120]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=434, Expect=4e-130]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=374, Expect=3e-107]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=327, Expect=4e-92]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [RH, Score=485, Expect=1e-149]} {RNA1509_2270} {RNA1310_2141} {RNA815_599}

Mlig455_015591 {REF} {Length: 4713} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.2]; Fibrillar collagen C-terminal domain [PF01410.20, score=118.9]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=418, Expect=3e-122]} {Mouse: ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=372, Expect=2e-106]; ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=354, Expect=1e-100]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=369, Expect=9e-106]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=327, Expect=3e-92]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=486, Expect=1e-149]} {RNA1509_2270} {RNA1310_2141, RNA1509_2270} {RNA1509_2270, RNA815_599}
4. MligTC455_39060 962 20.05 Mlig455_034536, Mlig455_070441

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.435

Region-enriched R5: 1.668/0.00004
Region-enriched R2: 1.408/0.04353

0.979 - - - - 0.979 -

Mlig455_034536 {REF} {Length: 2890} {Smed: dd_Smed_v6_10049_0_1, dd_Smed_v6_10049_0_1, [RH, Score=130, Expect=3e-32]} {RNA1509_7991} {RNA1310_1271.1} {RNA815_16754}

Mlig455_070441 {REF} {Length: 2941} {Smed: dd_Smed_v6_10049_0_1, dd_Smed_v6_10049_0_1, [RH, Score=129, Expect=4e-32]} {RNA1509_7991} {RNA1310_1271.1, RNA1509_7991} {RNA1509_7991, RNA815_16754}
5. MligTC455_33620 651 13.55 Mlig455_053546

Neo: -

Age: -

SCML2 0.971 - - - - 0.971 - Mlig455_053546 {REF} {Length: 3040} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=135.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=46.2]; SLED domain [PF12140.10, score=42.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.6]; Sterile alpha motif (SAM)/Pointed domain [PF02198.18, score=23.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=290, Expect=5e-87]; ENSG00000010803, SCMH1, Scm polycomb group protein homolog 1, [RH, Score=287, Expect=2e-86]} {Mouse: ENSMUSG00000000085, Scmh1, sex comb on midleg homolog 1, [RH, Score=341, Expect=9e-107]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=256, Expect=2e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=90.1, Expect=1e-18]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=173, Expect=4e-46]} {RNA1509_42002} {RNA1310_6155} {RNA815_20518}
6. MligTC455_32831 609 12.68 Mlig455_026495

Neo: -

Age: -

POLR3B 0.966 - - - - 0.966 - Mlig455_026495 {REF} {Length: 3723} {TRANSSPLICED} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=410.9]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=110.5]; RNA polymerase beta subunit [PF04563.17, score=94.6]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=77.8]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=77.5]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=75.0]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=39.2]} {Human: ENSG00000013503, POLR3B, RNA polymerase III subunit B, [RH, Score=1358, Expect=0.0]} {Mouse: ENSMUSG00000034453, Polr3b, polymerase (RNA) III (DNA directed) polypeptide B, [RH, Score=1357, Expect=0.0]} {Dmel: FBgn0004463, RpIII128, RNA polymerase III 128kD subunit, [RH, Score=1223, Expect=0.0]} {Celegans: WBGene00017300, rpc-2, DNA-directed RNA polymerase subunit beta, [RH, Score=1212, Expect=0.0]} {Smed: dd_Smed_v6_5517_0_1, dd_Smed_v6_5517_0_1, [RH, Score=864, Expect=0.0]} {RNA1509_14101, RNA1509_28477} {RNA1310_2096, RNA1509_14101, RNA1509_28477} {RNA1509_14101, RNA1509_28477, RNA815_877.1}
7. MligTC455_41299 378 7.87 Mlig455_020176

Neo: -

Age: -

CLK2 0.959 - - - - 0.959 - Mlig455_020176 {REF} {Length: 2938} {Pfam: Protein kinase domain [PF00069.27, score=156.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.4]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=470, Expect=4e-159]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=470, Expect=4e-159]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=450, Expect=4e-149]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=473, Expect=4e-160]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=495, Expect=6e-155]} {Celegans: WBGene00006517, madd-3, [RH, Score=439, Expect=2e-142]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [RH, Score=530, Expect=2e-179]} {RNA1509_12578} {RNA1310_7050, RNA1509_12578} {RNA1509_12578, RNA815_3787}
8. MligTC455_45309 692 14.41 Mlig455_060249

Neo: -

Age: logFC(26M/2M)=-0.339

ROGDI 0.954 - - - - 0.954 - Mlig455_060249 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: Rogdi leucine zipper containing protein [PF10259.11, score=79.4]} {Human: ENSG00000067836, ROGDI, rogdi homolog, [RH, Score=82.8, Expect=2e-18]} {Mouse: ENSMUSG00000022540, Rogdi, rogdi homolog, [RH, Score=83.6, Expect=1e-18]} {Dmel: FBgn0036697, rogdi, [RH, Score=104, Expect=4e-26]} {Celegans: WBGene00019196, H14A12.3, Protein rogdi homolog, [RH, Score=68.6, Expect=2e-13]} {Smed: dd_Smed_v6_4687_0_1, dd_Smed_v6_4687_0_1, [RH, Score=110, Expect=1e-29]} {RNA1509_30038, RNA1509_39875} {RNA1310_24614, RNA1509_30038, RNA1509_39875} {RNA1509_30038, RNA1509_39875, RNA815_14684}
9. MligTC455_27287 2246 46.8 Mlig455_017309, Mlig455_017320, Mlig455_054850

Neo: -

Age: Up-Down-Down

Regeneration-upregulated BL: 2.562

Regeneration-enriched BL: 2.562

CHD6, CHD7 0.952 - - - - 0.952 -

Mlig455_017309 {REF} {Length: 12411} {Pfam: SNF2-related domain [PF00176.25, score=228.4]; Helicase conserved C-terminal domain [PF00271.33, score=67.9]; Type III restriction enzyme, res subunit [PF04851.17, score=34.0]; BRK domain [PF07533.18, score=26.7]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=25.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.3]} {Human: ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [RH, Score=1174, Expect=0.0]; ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [RH, Score=1165, Expect=0.0]; ENSG00000177200, CHD9, chromodomain helicase DNA binding protein 9, [RH, Score=1161, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [RH, Score=1158, Expect=0.0]} {Mouse: ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [RH, Score=1182, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [RH, Score=1163, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [RH, Score=1162, Expect=0.0]; ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1099, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [RH, Score=988, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [Score=612, Expect=0.0]} {RNA1509_32496} {RNA1310_61.1} {RNA815_2864.1}

Mlig455_017320 {REF} {Length: 12689} {Pfam: SNF2-related domain [PF00176.25, score=228.0]; Helicase conserved C-terminal domain [PF00271.33, score=67.6]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=63.2]; Type III restriction enzyme, res subunit [PF04851.17, score=33.4]; BRK domain [PF07533.18, score=26.5]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.0]} {Human: ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [Score=1219, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [Score=1209, Expect=0.0]; ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [Score=1209, Expect=0.0]} {Mouse: ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [Score=1220, Expect=0.0]; ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [Score=1212, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [Score=1208, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [Score=1183, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1108, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [Score=1045, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [RH, Score=664, Expect=0.0]} {RNA1509_26378} {RNA1310_61.1, RNA1509_26378} {RNA1509_26378, RNA815_2864.1}

Mlig455_054850 {REF} {Length: 13730} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=228.0]; Helicase conserved C-terminal domain [PF00271.33, score=67.6]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=63.8]; Type III restriction enzyme, res subunit [PF04851.17, score=33.6]; BRK domain [PF07533.18, score=26.5]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.0]} {Human: ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [Score=1221, Expect=0.0]; ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [Score=1213, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [Score=1209, Expect=0.0]} {Mouse: ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [Score=1223, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [Score=1212, Expect=0.0]; ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [Score=1211, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [Score=1184, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1113, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [Score=1045, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [RH, Score=666, Expect=0.0]} {RNA1509_32496, RNA1509_47168, RNA1509_60046} {RNA1310_61.1, RNA1509_47168, RNA1509_60046} {RNA1509_47168, RNA1509_60046, RNA815_2864.1}

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