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Results for MligTC455_22622

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22622 253 5.27 Mlig455_069069

Neo: -

Age: -

Regeneration-upregulated R6: 2.381

Regeneration-enriched R6: 2.381

 ATRX Mlig455_069069 {REF} {Length: 7313} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=198.0]; Helicase conserved C-terminal domain [PF00271.33, score=51.8]} {Human: ENSG00000085224, ATRX, ATRX, chromatin remodeler, [Score=757, Expect=0.0]} {Mouse: ENSMUSG00000031229, Atrx, ATRX, chromatin remodeler, [RH, Score=759, Expect=0.0]} {Dmel: FBgn0039338, XNP, [RH, Score=709, Expect=0.0]} {Celegans: WBGene00006961, xnp-1, Transcriptional regulator ATRX homolog, [Score=626, Expect=0.0]} {Smed: dd_Smed_v6_5478_0_1, dd_Smed_v6_5478_0_1, [RH, Score=456, Expect=2e-139]} {RNA1509_2800} {RNA1310_990, RNA1509_2800} {RNA1509_2800, RNA815_839}

Cumulative graph for MligTC455_22622

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.199 2.957 0.41581 1.00000
RegionR2 0.914 2.957 0.39241 0.78700
RegionR3 -0.121 2.957 0.89389 1.00000
RegionR4 0.697 2.957 0.49230 0.81891
RegionR5 1.032 2.957 0.21585 0.51512
RegionR6 0.37 2.957 0.69260 1.00000
RegionR7 0.618 2.957 0.62944 1.00000
RegionR8 0.688 2.957 0.66077 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.705 2.957 0.99995 1.00000
RegenerationR2 1.146 2.957 0.02395 0.25455
RegenerationR3 1.714 2.957 0.01233 0.20410
RegenerationR4 1.39 2.957 0.02187 0.23531
RegenerationR5 1.327 2.957 0.00945 0.17445
RegenerationR6 2.381 2.957 0.00011 0.00933 Specific for R6: 2.381
RegenerationBL 2.352 2.957 0.00146 0.02939
RegenerationTP 1.232 2.957 0.20887 0.65078


Genes with expression patterns similar to MligTC455_22622

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22622 253 5.27 Mlig455_069069

Neo: -

Age: -

Regeneration-upregulated R6: 2.381

Regeneration-enriched R6: 2.381

 ATRX 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_069069 {REF} {Length: 7313} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=198.0]; Helicase conserved C-terminal domain [PF00271.33, score=51.8]} {Human: ENSG00000085224, ATRX, ATRX, chromatin remodeler, [Score=757, Expect=0.0]} {Mouse: ENSMUSG00000031229, Atrx, ATRX, chromatin remodeler, [RH, Score=759, Expect=0.0]} {Dmel: FBgn0039338, XNP, [RH, Score=709, Expect=0.0]} {Celegans: WBGene00006961, xnp-1, Transcriptional regulator ATRX homolog, [Score=626, Expect=0.0]} {Smed: dd_Smed_v6_5478_0_1, dd_Smed_v6_5478_0_1, [RH, Score=456, Expect=2e-139]} {RNA1509_2800} {RNA1310_990, RNA1509_2800} {RNA1509_2800, RNA815_839}
2. MligTC455_22621 584 12.17 Mlig455_012210

Neo: -

Age: -

 ATRX 3.306 0.763 - 0.742 0.841 0.960 - Mlig455_012210 {REF} {Length: 7201} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=198.9]; Helicase conserved C-terminal domain [PF00271.33, score=52.6]; Type III restriction enzyme, res subunit [PF04851.17, score=38.1]; CDC45-like protein [PF02724.16, score=17.5]} {Human: ENSG00000085224, ATRX, ATRX, chromatin remodeler, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000031229, Atrx, ATRX, chromatin remodeler, [Score=704, Expect=0.0]} {Dmel: FBgn0039338, XNP, [Score=653, Expect=0.0]} {Celegans: WBGene00006961, xnp-1, Transcriptional regulator ATRX homolog, [Score=575, Expect=0.0]} {Smed: dd_Smed_v6_5478_0_1, dd_Smed_v6_5478_0_1, [RH, Score=446, Expect=4e-141]} {RNA1509_2800, RNA1509_33370, RNA1509_42134, RNA1509_54667} {RNA1310_990, RNA1509_33370, RNA1509_42134, RNA1509_54667} {RNA1509_33370, RNA1509_42134, RNA1509_54667, RNA815_839}
3. MligTC455_32867 441 9.19 Mlig455_028342

Neo: -

Age: -

 EMSY 2.562 0.831 - - - 0.770 0.961 Mlig455_028342 {REF} {Length: 2127} {TRANSSPLICED} {Pfam: ENT domain [PF03735.16, score=51.4]} {Human: ENSG00000158636, EMSY, EMSY, BRCA2 interacting transcriptional repressor, [Score=63.9, Expect=4e-10]} {Mouse: ENSMUSG00000035401, Emsy, EMSY, BRCA2-interacting transcriptional repressor, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0031377, CG15356, [Score=62.8, Expect=3e-10]} {Smed: dd_Smed_v6_10628_0_2, dd_Smed_v6_10628_0_2, [Score=65.5, Expect=3e-11]} {RNA1509_23176} {RNA1310_12450} {RNA815_4381}
4. MligTC455_33868 554 11.55 Mlig455_005238

Neo: -

Age: -

 MED13 1.791 - - - 0.841 - 0.950 Mlig455_005238 {REF} {Length: 7105} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=203, Expect=9e-52]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887, RNA1509_5621} {RNA1509_5621, RNA815_2444}
5. MligTC455_39966 945 19.68 Mlig455_068099

Neo: -

Age: -

 DHX16 1.786 - - - - 0.819 0.967 Mlig455_068099 {REF} {Length: 3162} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=77.8]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=64.4]; Helicase conserved C-terminal domain [PF00271.33, score=45.6]; DEAD/DEAH box helicase [PF00270.31, score=24.9]; AAA domain [PF13401.8, score=21.6]; AAA domain [PF13604.8, score=19.3]} {Human: ENSG00000233418, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000231377, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000233561, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000233049, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000204560, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000226171, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000206486, DHX16, DEAH-box helicase 16, [RH, Score=1182, Expect=0.0]} {Mouse: ENSMUSG00000024422, Dhx16, DEAH (Asp-Glu-Ala-His) box polypeptide 16, [RH, Score=1187, Expect=0.0]} {Dmel: FBgn0086444, l(2)37Cb, lethal (2) 37Cb, [RH, Score=1224, Expect=0.0]} {Celegans: WBGene00003392, mog-4, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4, [RH, Score=1162, Expect=0.0]} {Smed: dd_Smed_v6_10434_0_1, dd_Smed_v6_10434_0_1, [RH, Score=882, Expect=0.0]} {RNA1509_45569, RNA1509_6379} {RNA1310_4272, RNA1509_45569} {RNA1509_45569, RNA815_1313}
6. MligTC455_12932 233 4.86 Mlig455_068053

Neo: -

Age: Down-Down-Up

Region-enriched R2: 2.157/0.04323

 ANKRD40 1.781 - - - 0.802 - 0.979 Mlig455_068053 {REF} {Length: 4350} {Pfam: OCRE domain [PF17780.3, score=45.6]; Ankyrin repeats (many copies) [PF13637.8, score=34.0]; Ankyrin repeat [PF00023.32, score=31.1]; Ankyrin repeats (3 copies) [PF12796.9, score=30.9]; Ankyrin repeats (many copies) [PF13857.8, score=25.7]; Ankyrin repeat [PF13606.8, score=19.8]} {Human: ENSG00000154945, ANKRD40, ankyrin repeat domain 40, [RH, Score=94.0, Expect=6e-20]} {Mouse: ENSMUSG00000020864, Ankrd40, ankyrin repeat domain 40, [RH, Score=93.2, Expect=7e-20]} {Dmel: FBgn0031319, CG4896, [Score=57.4, Expect=4e-08]} {Celegans: WBGene00011270, R31.2, [RH, Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_2392_0_2, dd_Smed_v6_2392_0_2, [Score=58.2, Expect=1e-08]} {RNA1509_49616, RNA1509_49906} {RNA1310_18118, RNA1509_49906} {RNA1509_49906, RNA815_7502}
7. MligTC455_30446 118 2.45 Mlig455_063925

Neo: -

Age: Up-Down-Up

 0.963 - - - 0.963 - - Mlig455_063925 {REF} {Length: 387} {NoTransDecoderORF} {RNA1509_36847, RNA1509_43241} {RNA1310_54778, RNA1509_36847} {RNA1509_36847, RNA815_551.1}
8. MligTC455_51905 421 8.77 Mlig455_063645

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 1.228/0.01970

 HAT1 0.962 - - - - 0.962 - Mlig455_063645 {REF} {Length: 2105} {TRANSSPLICED} {Pfam: Histone acetyl transferase HAT1 N-terminus [PF10394.11, score=149.0]} {Human: ENSG00000128708, HAT1, histone acetyltransferase 1, [RH, Score=328, Expect=1e-108]} {Mouse: ENSMUSG00000027018, Hat1, histone aminotransferase 1, [RH, Score=327, Expect=1e-108]} {Dmel: FBgn0037376, Hat1, Histone acetyltransferase 1, [RH, Score=314, Expect=1e-103]} {Celegans: WBGene00044069, hat-1, Histone AcetylTransferase, [RH, Score=247, Expect=1e-77]} {Smed: dd_Smed_v6_10558_1_2, dd_Smed_v6_10558_1_2, [RH, Score=249, Expect=1e-78]} {RNA1509_24341, RNA1509_7817} {RNA1310_11814.1, RNA1509_24341, RNA1509_7817} {RNA1509_24341, RNA1509_7817, RNA815_4446}
9. MligTC455_48533 231 4.81 Mlig455_021648

Neo: -

Age: -

 CACUL1 0.959 - - - - - 0.959 Mlig455_021648 {REF} {Length: 1793} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=41.9]} {Human: ENSG00000151893, CACUL1, CDK2 associated cullin domain 1, [RH, Score=97.1, Expect=7e-23]} {Mouse: ENSMUSG00000033417, Cacul1, CDK2 associated, cullin domain 1, [Score=97.4, Expect=9e-23]} {RNA1509_52558} {RNA1310_2696.1} {RNA815_6533.1}
10. MligTC455_19967 468 9.74 Mlig455_060812

Neo: -

Age: -

 DHX33 0.957 - - - - - 0.957 Mlig455_060812 {REF} {Length: 4606} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=58.3]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=39.8]; Helicase conserved C-terminal domain [PF00271.33, score=38.1]; DEAD/DEAH box helicase [PF00270.31, score=21.7]} {Human: ENSG00000005100, DHX33, DEAH-box helicase 33, [Score=466, Expect=7e-154]} {Mouse: ENSMUSG00000040620, Dhx33, DEAH (Asp-Glu-Ala-His) box polypeptide 33, [Score=461, Expect=4e-152]} {Dmel: FBgn0032194, CG4901, [Score=439, Expect=8e-144]} {Celegans: WBGene00003392, mog-4, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4, [Score=414, Expect=7e-131]} {Smed: dd_Smed_v6_13370_0_1, dd_Smed_v6_13370_0_1, [Score=392, Expect=7e-126]} {RNA1509_16843} {RNA1310_5246, RNA1509_16843} {RNA1509_16843, RNA815_3446}
11. MligTC455_35055 202 4.2 Mlig455_030770

Neo: -

Age: -

 TMEM39A 0.956 - - - 0.956 - - Mlig455_030770 {REF} {Length: 2394} {Pfam: Putative transmembrane protein [PF10271.11, score=332.6]} {Human: ENSG00000176142, TMEM39A, transmembrane protein 39A, [RH, Score=201, Expect=8e-59]} {Mouse: ENSMUSG00000002845, Tmem39a, transmembrane protein 39a, [RH, Score=206, Expect=8e-61]} {Dmel: FBgn0033899, CG13016, [RH, Score=155, Expect=2e-42]} {Celegans: WBGene00017003, D1007.5, [RH, Score=132, Expect=1e-33]} {Smed: dd_Smed_v6_10141_0_1, dd_Smed_v6_10141_0_1, [RH, Score=244, Expect=1e-74]} {RNA1509_31177} {RNA1310_14806.1} {RNA815_4046.1}
12. MligTC455_32335 202 4.21 Mlig455_017656

Neo: -

Age: Up-Down-Down

 FXR1 0.955 - - - - - 0.955 Mlig455_017656 {REF} {Length: 3938} {Pfam: KH domain [PF00013.31, score=61.5]; FMRP KH0 domain [PF17904.3, score=29.8]; Agenet domain [PF05641.14, score=22.2]} {Human: ENSG00000114416, FXR1, FMR1 autosomal homolog 1, [RH, Score=275, Expect=6e-84]} {Mouse: ENSMUSG00000027680, Fxr1, fragile X mental retardation gene 1, autosomal homolog, [RH, Score=277, Expect=1e-84]} {Dmel: FBgn0028734, Fmr1, [RH, Score=237, Expect=3e-69]} {Smed: dd_Smed_v6_2105_0_1, dd_Smed_v6_2105_0_1, [RH, Score=216, Expect=6e-63]} {RNA1509_38590} {RNA1310_3140.1} {RNA815_2441}
13. MligTC455_45585 1813 37.77 Mlig455_047383

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.249

 CSNK2A1 0.955 - - - - - 0.955 Mlig455_047383 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=68.5]; Phosphotransferase enzyme family [PF01636.25, score=24.8]; Fungal protein kinase [PF17667.3, score=20.2]} {Human: ENSG00000101266, CSNK2A1, casein kinase 2 alpha 1, [RH, Score=555, Expect=0.0]; ENSG00000254598, CSNK2A3, casein kinase 2 alpha 3, [RH, Score=548, Expect=0.0]} {Mouse: ENSMUSG00000101523, Gm10031, predicted pseudogene 10031, [RH, Score=554, Expect=0.0]; ENSMUSG00000074698, Csnk2a1, casein kinase 2, alpha 1 polypeptide, [RH, Score=554, Expect=0.0]} {Dmel: FBgn0264492, CkIIalpha, casein kinase IIalpha, [RH, Score=539, Expect=0.0]} {Celegans: WBGene00002191, kin-3, Casein kinase II subunit alpha, [RH, Score=513, Expect=0.0]} {Smed: dd_Smed_v6_6315_0_2, dd_Smed_v6_6315_0_2, [RH, Score=549, Expect=0.0]} {RNA1509_3405} {RNA1310_5348.1} {RNA815_5742}
14. MligTC455_25617 467 9.72 Mlig455_008276

Neo: -

Age: Down-Up-Up

 POLDIP3 0.952 - - - - - 0.952 Mlig455_008276 {REF} {Length: 2527} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.1]} {Human: ENSG00000100227, POLDIP3, DNA polymerase delta interacting protein 3, [Score=72.4, Expect=5e-13]} {Mouse: ENSMUSG00000041815, Poldip3, polymerase (DNA-directed), delta interacting protein 3, [Score=72.4, Expect=3e-13]} {Dmel: FBgn0030959, CG6961, [Score=56.2, Expect=4e-08]} {Smed: dd_Smed_v6_6532_0_3, dd_Smed_v6_6532_0_3, [Score=70.9, Expect=3e-13]} {RNA1509_32480} {RNA1310_8064.2} {RNA815_20463}
15. MligTC455_31541 217 4.53 Mlig455_009621

Neo: -

Age: Up-Down-Down

 CPSF1 0.952 - - - - - 0.952 Mlig455_009621 {REF} {Length: 7493} {TRANSSPLICED} {Pfam: CPSF A subunit region [PF03178.17, score=217.3]; Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=80.2]} {Human: ENSG00000071894, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]; ENSG00000285049, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]} {Mouse: ENSMUSG00000034022, Cpsf1, cleavage and polyadenylation specific factor 1, [RH, Score=570, Expect=3e-174]} {Dmel: FBgn0024698, Cpsf160, Cleavage and polyadenylation specificity factor 160, [RH, Score=473, Expect=8e-140]} {Celegans: WBGene00022301, cpsf-1, Probable cleavage and polyadenylation specificity factor subunit 1, [RH, Score=364, Expect=5e-103]} {Smed: dd_Smed_v6_8644_0_1, dd_Smed_v6_8644_0_1, [RH, Score=468, Expect=1e-137]} {RNA1509_5909} {RNA1310_503.1} {RNA815_575.1}
16. MligTC455_37394 43 0.89 Mlig455_013716

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.606

 STK26 0.95 - - - 0.950 - - Mlig455_013716 {REF} {Length: 3206} {Pfam: Protein kinase domain [PF00069.27, score=84.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=58.2]; Ankyrin repeats (many copies) [PF13637.8, score=54.2]; Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13857.8, score=34.6]; Ankyrin repeat [PF13606.8, score=34.0]; Ankyrin repeat [PF00023.32, score=23.7]} {Human: ENSG00000134602, STK26, serine/threonine kinase 26, [Score=65.9, Expect=7e-11]; ENSG00000065613, SLK, STE20 like kinase, [Score=65.1, Expect=4e-10]; ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=65.1, Expect=4e-10]; ENSG00000137601, NEK1, NIMA related kinase 1, [Score=64.3, Expect=7e-10]; ENSG00000132155, RAF1, Raf-1 proto-oncogene, serine/threonine kinase, [Score=64.3, Expect=5e-10]; ENSG00000126562, WNK4, WNK lysine deficient protein kinase 4, [Score=63.5, Expect=1e-09]} {Mouse: ENSMUSG00000031644, Nek1, NIMA (never in mitosis gene a)-related expressed kinase 1, [Score=65.1, Expect=3e-10]; ENSMUSG00000031112, Stk26, serine/threonine kinase 26, [Score=64.7, Expect=2e-10]; ENSMUSG00000025060, Slk, STE20-like kinase, [Score=64.3, Expect=5e-10]; ENSMUSG00000000441, Raf1, v-raf-leukemia viral oncogene 1, [Score=63.9, Expect=5e-10]; ENSMUSG00000035112, Wnk4, WNK lysine deficient protein kinase 4, [Score=63.2, Expect=1e-09]} {Dmel: FBgn0031299, CG4629, [Score=56.2, Expect=7e-08]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=54.3, Expect=3e-07]} {Smed: dd_Smed_v6_1196_0_1, dd_Smed_v6_1196_0_1, [Score=51.2, Expect=7e-07]} {RNA1509_11136} {RNA1310_29101} {RNA815_16478}

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