TomoSeq data search

Data search

Results for MligTC455_33030

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33030

1399

29.14

Mlig455_068103

Neo: -

Age: logFC(26M/2M)=-0.209

Mlig455_068103 {REF} {Length: 4508} {RNA1509_19594, RNA1509_40038} {RNA1310_6816.1, RNA1509_19594} {RNA1509_19594, RNA815_2112.1}

Cumulative graph for MligTC455_33030

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.69	5.106	0.07115	0.59592
RegionR2	0.347	5.106	0.34213	0.73423
RegionR3	0.302	5.106	0.32134	0.85899
RegionR4	0.14	5.106	0.69897	0.98784
RegionR5	0.58	5.106	0.03932	0.15745
RegionR6	0.386	5.106	0.20710	0.78262
RegionR7	-0.283	5.106	0.48504	1.00000
RegionR8	0.219	5.106	0.61825	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.005	5.106	0.99783	1.00000
RegenerationR2	0.136	5.106	0.65055	0.93664
RegenerationR3	0.253	5.106	0.44858	0.83123
RegenerationR4	0.368	5.106	0.29252	0.73593
RegenerationR5	0.262	5.106	0.40162	0.80030
RegenerationR6	0.134	5.106	0.69427	0.92154
RegenerationBL	-0.084	5.106	0.82751	1.00000
RegenerationTP	0.475	5.106	0.23690	0.68263

Genes with expression patterns similar to MligTC455_33030

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33030	1399	29.14	Mlig455_068103	Neo: - Age: logFC(26M/2M)=-0.209		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_068103 {REF} {Length: 4508} {RNA1509_19594, RNA1509_40038} {RNA1310_6816.1, RNA1509_19594} {RNA1509_19594, RNA815_2112.1}
2.	MligTC455_33029	1340	27.92	Mlig455_068102	Neo: - Age: Up-Down-Down		5.943	0.992	0.984	0.991	0.994	0.991	0.991	Mlig455_068102 {REF} {Length: 1715} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29110, RNA1509_40038} {RNA1310_2639.1, RNA1509_29110} {RNA1509_29110, RNA815_20840}
3.	MligTC455_33028	1326	27.62	Mlig455_023601	Neo: - Age: logFC(26M/2M)=1.868		5.845	0.984	0.976	0.990	0.987	0.915	0.993	Mlig455_023601 {REF} {Length: 2181} {RNA1509_40038} {RNA1310_6816.1} {RNA815_2112.1}
4.	MligTC455_46732	1475	30.74	Mlig455_016558	Neo: - Age: -	ARFGAP1	1.833	-	-	-	0.957	-	0.876	Mlig455_016558 {REF} {Length: 3115} {TRANSSPLICED} {Human: ENSG00000101199, ARFGAP1, ADP ribosylation factor GTPase activating protein 1, [Score=149, Expect=4e-40]} {Mouse: ENSMUSG00000027575, Arfgap1, ADP-ribosylation factor GTPase activating protein 1, [Score=145, Expect=7e-39]} {Dmel: FBgn0020655, ArfGAP1, ADP-ribosylation factor GTPase activating protein 1, [Score=192, Expect=5e-56]} {Celegans: WBGene00010500, K02B12.7, [Score=124, Expect=3e-31]} {RNA1509_3768} {RNA1310_4307.1} {RNA815_7335}
5.	MligTC455_49806	1837	38.28	Mlig455_014409	Neo: - Age: -	RAC3	0.959	-	-	-	0.959	-	-	Mlig455_014409 {REF} {Length: 1644} {Pfam: Ras family [PF00071.24, score=146.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.3]; ADP-ribosylation factor family [PF00025.23, score=44.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.5]} {Human: ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=140, Expect=2e-41]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=138, Expect=5e-41]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=137, Expect=1e-40]; ENSG00000070831, CDC42, cell division cycle 42, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=135, Expect=2e-39]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=135, Expect=1e-39]} {Mouse: ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=140, Expect=1e-41]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=138, Expect=3e-41]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=137, Expect=9e-41]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=134, Expect=2e-39]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=138, Expect=4e-41]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=145, Expect=6e-44]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=138, Expect=2e-41]} {RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1310_34688.1, RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1509_14417, RNA1509_15579, RNA1509_32277, RNA815_20638}
6.	MligTC455_48643	997	20.78	Mlig455_062585	Neo: - Age: -	TBC1D30	0.953	-	-	-	0.953	-	-	Mlig455_062585 {REF} {Length: 4312} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=120.0]} {Human: ENSG00000111490, TBC1D30, TBC1 domain family member 30, [RH, Score=404, Expect=8e-127]} {Mouse: ENSMUSG00000052302, Tbc1d30, TBC1 domain family, member 30, [RH, Score=406, Expect=1e-127]} {Dmel: FBgn0261928, CG42795, [RH, Score=309, Expect=2e-87]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [Score=107, Expect=4e-25]} {Smed: dd_Smed_v6_6508_0_1, dd_Smed_v6_6508_0_1, [RH, Score=475, Expect=2e-152]} {RNA1509_16721, RNA1509_17210, RNA1509_52239} {RNA1310_5240, RNA1509_16721, RNA1509_17210, RNA1509_52239} {RNA1509_16721, RNA1509_17210, RNA1509_52239, RNA815_1005.1}
7.	MligTC455_26611	643	13.39	Mlig455_024673	Neo: - Age: Up-Down-Up Region-enriched R4: 1.538/0.03428	RAB39B	0.952	-	-	-	0.952	-	-	Mlig455_024673 {REF} {Length: 2857} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=159.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=92.8]; ADP-ribosylation factor family [PF00025.23, score=40.5]; 50S ribosome-binding GTPase [PF01926.25, score=28.9]} {Human: ENSG00000155961, RAB39B, RAB39B, member RAS oncogene family, [RH, Score=189, Expect=4e-60]; ENSG00000179331, RAB39A, RAB39A, member RAS oncogene family, [RH, Score=187, Expect=2e-59]} {Mouse: ENSMUSG00000055069, Rab39, RAB39, member RAS oncogene family, [RH, Score=190, Expect=8e-61]; ENSMUSG00000031202, Rab39b, RAB39B, member RAS oncogene family, [RH, Score=189, Expect=3e-60]} {Dmel: FBgn0029959, Rab39, [RH, Score=201, Expect=3e-65]} {Celegans: WBGene00004286, rab-39, RAB family, [RH, Score=197, Expect=2e-63]} {Smed: dd_Smed_v6_3651_0_1, dd_Smed_v6_3651_0_1, [RH, Score=216, Expect=4e-71]} {RNA1509_26640, RNA1509_58665} {RNA1310_33935, RNA1509_26640, RNA1509_58665} {RNA1509_26640, RNA1509_58665, RNA815_16719}
8.	MligTC455_47922	1165	24.28	Mlig455_029665	Neo: - Age: -	AC023055.1	0.951	-	-	-	-	-	0.951	Mlig455_029665 {REF} {Length: 3793} {TRANSSPLICED} {Pfam: Cleavage inducing molecular chaperone [PF14901.8, score=83.0]; DnaJ domain [PF00226.33, score=23.5]} {Human: ENSG00000257390, AC023055.1, novel protein, [RH, Score=112, Expect=3e-25]; ENSG00000135392, DNAJC14, DnaJ heat shock protein family (Hsp40) member C14, [RH, Score=110, Expect=4e-24]} {Mouse: ENSMUSG00000025354, Dnajc14, DnaJ heat shock protein family (Hsp40) member C14, [RH, Score=110, Expect=3e-24]} {Dmel: FBgn0037252, CG14650, [RH, Score=137, Expect=1e-32]} {Celegans: WBGene00001023, dnj-5, DnaJ homolog dnj-5, [RH, Score=93.2, Expect=3e-19]} {RNA1509_24236, RNA1509_3741} {RNA1310_2725.1, RNA1509_24236, RNA1509_3741} {RNA1509_24236, RNA1509_3741, RNA815_8388}
9.	MligTC455_52540	588	12.24	Mlig455_066987	Neo: - Age: -	TULP4	0.951	-	-	-	-	-	0.951	Mlig455_066987 {REF} {Length: 4354} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=88.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.9]} {Human: ENSG00000130338, TULP4, tubby like protein 4, [RH, Score=243, Expect=5e-66]} {Mouse: ENSMUSG00000034377, Tulp4, tubby like protein 4, [RH, Score=242, Expect=8e-66]} {Dmel: FBgn0039530, Tusp, [RH, Score=248, Expect=8e-68]} {Celegans: WBGene00022139, tub-2, TUBby-related, [RH, Score=98.6, Expect=4e-22]} {Smed: dd_Smed_v6_18217_0_1, dd_Smed_v6_18217_0_1, [RH, Score=114, Expect=8e-26]} {RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1310_4370.1, RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1509_50986, RNA1509_52335, RNA1509_9068, RNA815_13995}

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