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Results for MligTC455_33177

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33177 102 2.12 Mlig455_064812

Neo: -

Age: -

 Mlig455_064812 {REF} {Length: 2741} {RNA1509_801} {RNA1310_53126} {RNA815_1839.1}

Cumulative graph for MligTC455_33177

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.721 1.843 0.63280 1.00000
RegionR2 -0.499 1.843 0.96069 1.00000
RegionR3 0.032 1.843 0.85002 1.00000
RegionR4 0.349 1.843 0.73405 1.00000
RegionR5 -0.444 1.843 0.95177 1.00000
RegionR6 -0.347 1.843 0.93937 1.00000
RegionR7 1.582 1.843 0.21477 0.83137
RegionR8 2.049 1.843 0.17042 0.74458

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.58 1.843 0.99986 1.00000
RegenerationR2 -0.166 1.843 0.85042 1.00000
RegenerationR3 -0.269 1.843 0.76581 0.96985
RegenerationR4 -0.126 1.843 0.89673 1.00000
RegenerationR5 0.603 1.843 0.48932 0.85193
RegenerationR6 1.558 1.843 0.09597 0.38510
RegenerationBL 0.96 1.843 0.32188 0.68874
RegenerationTP -0.921 1.843 0.40318 0.83159


Genes with expression patterns similar to MligTC455_33177

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33177 102 2.12 Mlig455_064812

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_064812 {REF} {Length: 2741} {RNA1509_801} {RNA1310_53126} {RNA815_1839.1}
2. MligTC455_13584 45 0.94 Mlig455_048123

Neo: -

Age: -

 0.97 - - - 0.970 - - Mlig455_048123 {REF} {Length: 651} {NoTransDecoderORF} {RNA1310_64743}
3. MligTC455_21519 505 10.53 Mlig455_039816

Neo: -

Age: -

 GHDC 0.967 0.967 - - - - - Mlig455_039816 {REF} {Length: 3759} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=390.4]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [Score=72.0, Expect=2e-12]} {RNA1509_59400} {RNA1310_11058.1} {RNA815_4223.1}
4. MligTC455_41444 445 9.26 Mlig455_001547

Neo: Irradiation

Age: Up-Up-Down

 TRIM3 0.967 - - - 0.967 - - Mlig455_001547 {REF} {Length: 5402} {Pfam: NHL repeat [PF01436.23, score=78.7]; B-box zinc finger [PF00643.26, score=43.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=123, Expect=3e-28]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=122, Expect=4e-28]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=459, Expect=1e-144]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=223, Expect=3e-61]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_4482} {RNA1310_1955, RNA1509_4482} {RNA1509_4482, RNA815_2913.1}
5. MligTC455_24865 614 12.79 Mlig455_064458

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_064458 {REF} {Length: 4611} {TRANSSPLICED} {RNA1509_2950} {RNA1310_1598} {RNA815_488.1}
6. MligTC455_31867 118 2.46 Mlig455_015324

Neo: -

Age: -

 0.964 - - - 0.964 - - Mlig455_015324 {REF} {Length: 4165} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=18.7]} {RNA1509_44743, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1310_5450.1, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1509_45704, RNA1509_45713, RNA1509_55716, RNA815_16253.2}
7. MligTC455_28461 44 0.91 Mlig455_022463

Neo: -

Age: logFC(26M/2M)=-0.616

 CHD3 0.961 - - - 0.961 - - Mlig455_022463 {REF} {Length: 6549} {TRANSSPLICED} {Pfam: CHDCT2 (NUC038) domain [PF08074.13, score=236.8]; SNF2-related domain [PF00176.25, score=208.8]; Domain of Unknown Function (DUF1086) [PF06461.13, score=159.6]; Helicase conserved C-terminal domain [PF00271.33, score=74.7]; Domain of Unknown Function (DUF1087) [PF06465.15, score=70.1]; PHD-finger [PF00628.31, score=62.7]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=56.8]; Type III restriction enzyme, res subunit [PF04851.17, score=31.9]; CHDNT (NUC034) domain [PF08073.14, score=30.0]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=28.2]; PHD-finger [PF13831.8, score=22.0]} {Human: ENSG00000170004, CHD3, chromodomain helicase DNA binding protein 3, [RH, Score=1752, Expect=0.0]; ENSG00000111642, CHD4, chromodomain helicase DNA binding protein 4, [RH, Score=1731, Expect=0.0]; ENSG00000116254, CHD5, chromodomain helicase DNA binding protein 5, [RH, Score=1731, Expect=0.0]} {Mouse: ENSMUSG00000005045, Chd5, chromodomain helicase DNA binding protein 5, [RH, Score=1756, Expect=0.0]; ENSMUSG00000018474, Chd3, chromodomain helicase DNA binding protein 3, [RH, Score=1728, Expect=0.0]} {Dmel: FBgn0262519, Mi-2, [RH, Score=1763, Expect=0.0]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [RH, Score=1548, Expect=0.0]} {Smed: dd_Smed_v6_2331_0_1, dd_Smed_v6_2331_0_1, [RH, Score=1726, Expect=0.0]} {RNA1509_45505, RNA1509_4759, RNA1509_7334} {RNA1310_3082.1, RNA1509_45505, RNA1509_4759, RNA1509_7334} {RNA1509_45505, RNA1509_4759, RNA1509_7334, RNA815_1229}
8. MligTC455_49649 277 5.78 Mlig455_045917, Mlig455_046096

Neo: Irradiation

Age: -

 ERCC8 0.961 - - - 0.961 - -

Mlig455_045917 {REF} {Length: 2112} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=86.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.5]} {Human: ENSG00000049167, ERCC8, ERCC excision repair 8, CSA ubiquitin ligase complex subunit, [RH, Score=228, Expect=2e-70]} {Mouse: ENSMUSG00000021694, Ercc8, excision repaiross-complementing rodent repair deficiency, complementation group 8, [RH, Score=239, Expect=1e-74]} {Dmel: FBgn0027524, CG3909, [Score=62.8, Expect=1e-10]} {Celegans: WBGene00004312, rba-1, Probable histone-binding protein rba-1, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_9396_0_1, dd_Smed_v6_9396_0_1, [RH, Score=197, Expect=2e-59]} {RNA1509_40956} {RNA1310_16657, RNA1509_40956} {RNA1509_40956, RNA815_22444}

Mlig455_046096 {REF} {Length: 1921} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=74.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=28.2]} {Human: ENSG00000049167, ERCC8, ERCC excision repair 8, CSA ubiquitin ligase complex subunit, [Score=206, Expect=2e-62]} {Mouse: ENSMUSG00000021694, Ercc8, excision repaiross-complementing rodent repair deficiency, complementation group 8, [Score=214, Expect=6e-66]} {Dmel: FBgn0040066, wds, will die slowly, [Score=59.3, Expect=2e-09]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=58.9, Expect=2e-09]} {Smed: dd_Smed_v6_9396_0_1, dd_Smed_v6_9396_0_1, [Score=181, Expect=7e-54]} {RNA1509_40956, RNA1509_43116} {RNA1310_16657, RNA1509_43116} {RNA1509_43116, RNA815_22444}
9. MligTC455_50386 19 0.39 Mlig455_007195

Neo: -

Age: -

 IMP4 0.96 - - - 0.960 - - Mlig455_007195 {REF} {Length: 990} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=66.4]} {Human: ENSG00000136718, IMP4, IMP4, U3 small nucleolar ribonucleoprotein, [Score=258, Expect=3e-85]} {Mouse: ENSMUSG00000026127, Imp4, IMP4, U3 small nucleolar ribonucleoprotein, [Score=258, Expect=2e-85]} {Dmel: FBgn0039274, CG11920, [Score=244, Expect=3e-80]} {Celegans: WBGene00014083, ZK795.3, Brix domain-containing protein ZK795.3, [Score=269, Expect=4e-90]} {Smed: dd_Smed_v6_7284_0_1, dd_Smed_v6_7284_0_1, [Score=216, Expect=4e-69]} {RNA1509_5070} {RNA1310_32305.1} {RNA815_15104}
10. MligTC455_03994 91 1.9 Mlig455_034412

Neo: -

Age: logFC(26M/2M)=-0.478

 SLC35C1 0.958 - - - 0.958 - - Mlig455_034412 {REF} {Length: 2379} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=67.4]; EamA-like transporter family [PF00892.22, score=24.0]} {Human: ENSG00000181830, SLC35C1, solute carrier family 35 member C1, [RH, Score=345, Expect=1e-117]} {Mouse: ENSMUSG00000049922, Slc35c1, solute carrier family 35, member C1, [RH, Score=371, Expect=8e-128]} {Dmel: FBgn0265351, nac, neuronally altered carbohydrate, [RH, Score=309, Expect=5e-104]} {Celegans: WBGene00008237, nstp-10, GDP-fucose transporter, [RH, Score=353, Expect=6e-121]} {Smed: dd_Smed_v6_12626_0_1, dd_Smed_v6_12626_0_1, [RH, Score=342, Expect=2e-117]} {RNA1509_34760} {RNA1310_3307} {RNA815_6546}
11. MligTC455_37570 446 9.3 Mlig455_009506

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.421

 SRP72 0.954 - - - 0.954 - - Mlig455_009506 {REF} {Length: 3095} {Pfam: Putative TPR-like repeat [PF17004.7, score=60.8]; SRP72 RNA-binding domain [PF08492.14, score=58.5]; Tetratricopeptide repeat [PF07719.19, score=30.2]} {Human: ENSG00000174780, SRP72, signal recognition particle 72, [RH, Score=338, Expect=4e-106]} {Mouse: ENSMUSG00000036323, Srp72, signal recognition particle 72, [RH, Score=328, Expect=1e-102]} {Dmel: FBgn0038810, Srp72, Signal recognition particle protein 72, [RH, Score=287, Expect=4e-87]} {Celegans: WBGene00017245, srpa-72, Signal recognition particle subunit SRP72, [RH, Score=241, Expect=4e-70]} {Smed: dd_Smed_v6_2629_0_1, dd_Smed_v6_2629_0_1, [RH, Score=375, Expect=2e-120]} {RNA1509_27018, RNA1509_4629} {RNA1310_9141.3, RNA1509_27018, RNA1509_4629} {RNA1509_27018, RNA1509_4629, RNA815_4690}
12. MligTC455_44539 510 10.62 Mlig455_019095

Neo: Irradiation

Age: logFC(26M/2M)=0.310

Regeneration-upregulated BL: 1.934

Regeneration-enriched BL: 1.934

 AATF 0.953 - - - 0.953 - - Mlig455_019095 {REF} {Length: 2406} {TRANSSPLICED} {Pfam: Apoptosis-antagonizing transcription factor, C-terminal [PF08164.14, score=47.5]; Apoptosis antagonizing transcription factor [PF13339.8, score=33.0]} {Human: ENSG00000275700, AATF, apoptosis antagonizing transcription factor, [RH, Score=82.8, Expect=5e-17]; ENSG00000276072, AATF, apoptosis antagonizing transcription factor, [RH, Score=82.8, Expect=5e-17]} {Mouse: ENSMUSG00000018697, Aatf, apoptosis antagonizing transcription factor, [RH, Score=80.5, Expect=2e-16]} {Dmel: FBgn0031851, Aatf, Apoptosis antagonizing transcription factor, [RH, Score=84.3, Expect=7e-18]} {Celegans: WBGene00022269, Y73E7A.2, [Score=54.7, Expect=3e-08]} {RNA1509_19298, RNA1509_23937, RNA1509_7479} {RNA1310_30685.1, RNA1509_19298, RNA1509_23937, RNA1509_7479} {RNA1509_19298, RNA1509_23937, RNA1509_7479, RNA815_21622}
13. MligTC455_43572 61 1.26 Mlig455_037945

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.663

 VCX3B 0.952 0.952 - - - - - Mlig455_037945 {REF} {Length: 2194} {Human: ENSG00000205642, VCX3B, variable charge X-linked 3B, [Score=54.7, Expect=8e-09]} {RNA1509_22457} {RNA1310_35286} {RNA815_20576}
14. MligTC455_26169 52 1.09 Mlig455_019582, Mlig455_059116

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_019582 {REF} {Length: 1420} {NoTransDecoderORF} {RNA1509_30950} {RNA1310_25397.1} {RNA815_29835}

Mlig455_059116 {REF} {Length: 332} {NoTransDecoderORF} {RNA1509_8681} {RNA1310_37013} {RNA815_21585}

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