Data search


search
Exact
Search

Results for MligTC455_40918

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40918 807 16.81 Mlig455_064445

Neo: -

Age: -

Mlig455_064445 {REF} {Length: 3565} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=62.0]} {Dmel: FBgn0030961, CG7058, [RH, Score=81.6, Expect=2e-15]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=51.2, Expect=2e-06]} {RNA1509_15372, RNA1509_40543} {RNA1310_21275, RNA1509_40543} {RNA1509_40543, RNA815_19021}

Cumulative graph for MligTC455_40918

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.544 4.36 0.50156 1.00000
RegionR2 -0.136 4.36 0.77221 1.00000
RegionR3 -0.463 4.36 0.25723 0.80158
RegionR4 -0.086 4.36 0.85192 1.00000
RegionR5 0.861 4.36 0.01240 0.06759
RegionR6 -0.338 4.36 0.39862 0.97098
RegionR7 0.077 4.36 0.86652 1.00000
RegionR8 -0.46 4.36 0.45052 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.328 4.36 0.01050 0.44997
RegenerationR2 -0.569 4.36 0.21060 0.65774
RegenerationR3 -0.411 4.36 0.40133 0.80333
RegenerationR4 -0.531 4.36 0.27657 0.72219
RegenerationR5 -0.767 4.36 0.08054 0.44107
RegenerationR6 -0.42 4.36 0.39802 0.73605
RegenerationBL -0.592 4.36 0.29307 0.65535
RegenerationTP 0.396 4.36 0.46402 0.87691


Genes with expression patterns similar to MligTC455_40918

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40918 807 16.81 Mlig455_064445

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_064445 {REF} {Length: 3565} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=62.0]} {Dmel: FBgn0030961, CG7058, [RH, Score=81.6, Expect=2e-15]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=51.2, Expect=2e-06]} {RNA1509_15372, RNA1509_40543} {RNA1310_21275, RNA1509_40543} {RNA1509_40543, RNA815_19021}
2. MligTC455_23362 693 14.45 Mlig455_010012

Neo: -

Age: -

Region-enriched R5: 2.151/0.00000

1.799 - - 0.839 0.960 - - Mlig455_010012 {REF} {Length: 1229} {TRANSSPLICED} {RNA1509_40649} {RNA1310_23422} {RNA815_10704}
3. MligTC455_30255 132 2.75 Mlig455_011743

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.728/0.02036

1.667 - - - 0.965 0.702 - Mlig455_011743 {REF} {Length: 945} {TRANSSPLICED} {RNA1509_16349} {RNA1310_2575} {RNA815_54759}
4. MligTC455_22202 8064 168 Mlig455_002382, Mlig455_044552

Neo: -

Age: -

Regeneration-downregulated BL: -1.514

Regeneration-depleted BL: -1.514

TAGLN3 1.663 - - 0.705 - - 0.958

Mlig455_002382 {REF} {Length: 3420} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA1509_7417} {RNA1310_27238, RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA815_11370}

Mlig455_044552 {REF} {Length: 3421} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_7417} {RNA1310_27238, RNA1509_7417} {RNA1509_7417, RNA815_11370}
5. MligTC455_30616 169 3.52 Mlig455_054424

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.955/0.00381

0.958 - - - - - 0.958 Mlig455_054424 {REF} {Length: 1429} {RNA1509_56475} {RNA1310_28132} {RNA815_12515}
6. MligTC455_44173 946 19.7 Mlig455_035147

Neo: -

Age: Up-Down-Down

CCDC186 0.956 - - - - - 0.956 Mlig455_035147 {REF} {Length: 3057} {Human: ENSG00000165813, CCDC186, coiled-coil domain containing 186, [RH, Score=298, Expect=1e-88]} {Mouse: ENSMUSG00000035173, Ccdc186, coiled-coil domain containing 186, [RH, Score=174, Expect=6e-45]} {Dmel: FBgn0036614, Golgin104, Golgin 104, [RH, Score=163, Expect=7e-42]} {Celegans: WBGene00013042, cccp-1, CCCP-1; Conserved Coiled-Coil Protein, [RH, Score=114, Expect=6e-26]} {Smed: dd_Smed_v6_14004_0_1, dd_Smed_v6_14004_0_1, [RH, Score=240, Expect=3e-69]} {RNA1509_6064} {RNA1310_4462} {RNA815_938.1}
7. MligTC455_33486 297 6.18 Mlig455_048747

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.583

0.955 - - - - - 0.955 Mlig455_048747 {REF} {Length: 1479} {TRANSSPLICED} {Smed: dd_Smed_v6_4347_0_1, dd_Smed_v6_4347_0_1, [RH, Score=53.1, Expect=2e-09]} {RNA1509_37074} {RNA1310_22957} {RNA815_949}
8. MligTC455_43867 430 8.96 Mlig455_016287

Neo: -

Age: -

PARP16 0.955 - - - - - 0.955 Mlig455_016287 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=48.7]; ARTD15 N-terminal domain [PF18084.3, score=36.0]} {Human: ENSG00000138617, PARP16, poly(ADP-ribose) polymerase family member 16, [RH, Score=121, Expect=5e-31]} {Mouse: ENSMUSG00000032392, Parp16, poly (ADP-ribose) polymerase family, member 16, [RH, Score=120, Expect=8e-31]} {Smed: dd_Smed_v6_11933_0_1, dd_Smed_v6_11933_0_1, [RH, Score=53.1, Expect=1e-07]} {RNA1509_44116, RNA1509_58643} {RNA1310_24663, RNA1509_44116, RNA1509_58643} {RNA1509_44116, RNA1509_58643, RNA815_6246}
9. MligTC455_49627 453 9.43 Mlig455_020485

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_020485 {REF} {Length: 1358} {TRANSSPLICED} {RNA1310_29356.1} {RNA815_39483}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA