TomoSeq data search

Data search

Results for MligTC455_33635

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33635

324

6.75

Mlig455_053682

Neo: -

Age: Up-Down-Up

RALGAPB

Mlig455_053682 {REF} {Length: 7650} {Human: ENSG00000170471, RALGAPB, Ral GTPase activating protein non-catalytic beta subunit, [RH, Score=248, Expect=2e-66]} {Mouse: ENSMUSG00000027652, Ralgapb, Ral GTPase activating protein, beta subunit (non-catalytic), [RH, Score=249, Expect=1e-66]} {Dmel: FBgn0085437, CG34408, [RH, Score=258, Expect=3e-70]} {Celegans: WBGene00008430, hgap-2, Heterodimeric GTPase Activating Protein subunit, [Score=65.1, Expect=4e-10]} {Smed: dd_Smed_v6_8678_0_1, dd_Smed_v6_8678_0_1, [RH, Score=249, Expect=7e-67]} {RNA1509_58977} {RNA1310_7211.1} {RNA815_712.1}

Cumulative graph for MligTC455_33635

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.848	3.289	0.16012	0.78078
RegionR2	1.486	3.289	0.08218	0.35136
RegionR3	0.567	3.289	0.52851	1.00000
RegionR4	0.927	3.289	0.31101	0.62593
RegionR5	1.251	3.289	0.06994	0.23809
RegionR6	0.833	3.289	0.33774	0.92504
RegionR7	1.278	3.289	0.17114	0.76052
RegionR8	-0.495	3.289	0.95585	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.351	3.289	0.99995	1.00000
RegenerationR2	0.328	3.289	0.46351	0.85436
RegenerationR3	0.732	3.289	0.17518	0.61064
RegenerationR4	0.103	3.289	0.84945	1.00000
RegenerationR5	0.54	3.289	0.23589	0.66970
RegenerationR6	0.669	3.289	0.21135	0.55465
RegenerationBL	1.492	3.289	0.02914	0.18984
RegenerationTP	0.964	3.289	0.23682	0.68263

Genes with expression patterns similar to MligTC455_33635

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33635	324	6.75	Mlig455_053682	Neo: - Age: Up-Down-Up	RALGAPB	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053682 {REF} {Length: 7650} {Human: ENSG00000170471, RALGAPB, Ral GTPase activating protein non-catalytic beta subunit, [RH, Score=248, Expect=2e-66]} {Mouse: ENSMUSG00000027652, Ralgapb, Ral GTPase activating protein, beta subunit (non-catalytic), [RH, Score=249, Expect=1e-66]} {Dmel: FBgn0085437, CG34408, [RH, Score=258, Expect=3e-70]} {Celegans: WBGene00008430, hgap-2, Heterodimeric GTPase Activating Protein subunit, [Score=65.1, Expect=4e-10]} {Smed: dd_Smed_v6_8678_0_1, dd_Smed_v6_8678_0_1, [RH, Score=249, Expect=7e-67]} {RNA1509_58977} {RNA1310_7211.1} {RNA815_712.1}
2.	MligTC455_33634	440	9.16	Mlig455_053345	Neo: - Age: -	RALGAPB	5.436	0.906	0.938	0.725	0.969	0.919	0.979	Mlig455_053345 {REF} {Length: 7224} {TRANSSPLICED} {Human: ENSG00000170471, RALGAPB, Ral GTPase activating protein non-catalytic beta subunit, [RH, Score=248, Expect=2e-66]} {Mouse: ENSMUSG00000027652, Ralgapb, Ral GTPase activating protein, beta subunit (non-catalytic), [RH, Score=249, Expect=9e-67]} {Dmel: FBgn0085437, CG34408, [RH, Score=259, Expect=1e-70]} {Celegans: WBGene00008430, hgap-2, Heterodimeric GTPase Activating Protein subunit, [Score=65.1, Expect=4e-10]} {Smed: dd_Smed_v6_8678_0_2, dd_Smed_v6_8678_0_2, [RH, Score=249, Expect=3e-67]} {RNA1509_58977} {RNA1310_7211.1, RNA1509_58977} {RNA1509_58977, RNA815_712.1}
3.	MligTC455_30402	360	7.49	Mlig455_023005	Neo: - Age: - Region-enriched R4: 2.295/0.02503	CASP3	1.736	-	-	0.783	0.953	-	-	Mlig455_023005 {REF} {Length: 2936} {Pfam: Caspase domain [PF00656.24, score=126.2]; Ankyrin repeats (3 copies) [PF12796.9, score=112.1]; Ankyrin repeats (many copies) [PF13637.8, score=82.1]; Ankyrin repeat [PF13606.8, score=75.2]; Ankyrin repeats (many copies) [PF13857.8, score=74.0]; Ankyrin repeat [PF00023.32, score=57.5]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=138, Expect=6e-36]} {Mouse: ENSMUSG00000026029, Casp8, caspase 8, [Score=137, Expect=3e-34]; ENSMUSG00000031628, Casp3, caspase 3, [Score=135, Expect=4e-35]} {Dmel: FBgn0028381, Decay, Death executioner caspase related to Apopain/Yama, [Score=104, Expect=3e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=102, Expect=8e-24]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=126, Expect=1e-32]} {RNA1509_26758} {RNA1310_21351} {RNA815_10760}
4.	MligTC455_19733	1211	25.23	Mlig455_011529, Mlig455_011605, Mlig455_050015	Neo: - Age: -	SRP14	0.966	-	-	-	-	-	0.966	Mlig455_011529 {REF} {Length: 2498} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830} {RNA1310_47278.1} {RNA815_25613} Mlig455_011605 {REF} {Length: 2466} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435} {RNA1310_47278.1, RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435} {RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435, RNA815_25613} Mlig455_050015 {REF} {Length: 2672} {TRANSSPLICED} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830} {RNA1310_51627} {RNA815_25613}
5.	MligTC455_36099	380	7.91	Mlig455_031102	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_031102 {REF} {Length: 2608} {RNA1509_11448} {RNA1310_8565.1} {RNA815_3024}
6.	MligTC455_41048	764	15.92	Mlig455_045087	Neo: - Age: logFC(26M/2M)=-0.302	TBX2	0.96	-	-	-	0.960	-	-	Mlig455_045087 {REF} {Length: 2264} {Pfam: T-box [PF00907.24, score=261.7]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=321, Expect=3e-101]; ENSG00000135111, TBX3, T-box 3, [Score=317, Expect=3e-99]} {Mouse: ENSMUSG00000018604, Tbx3, T-box 3, [Score=325, Expect=7e-103]; ENSMUSG00000000093, Tbx2, T-box 2, [Score=320, Expect=6e-101]} {Dmel: FBgn0000179, bi, bifid, [Score=320, Expect=8e-99]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=288, Expect=2e-92]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=322, Expect=8e-103]} {RNA1509_19743, RNA1509_48603} {RNA1310_24036, RNA1509_19743, RNA1509_48603} {RNA1509_19743, RNA1509_48603, RNA815_18470}
7.	MligTC455_36100	427	8.89	Mlig455_031135	Neo: - Age: Down-Up-Up	ACOT9	0.957	-	-	-	0.957	-	-	Mlig455_031135 {REF} {Length: 3170} {TRANSSPLICED} {Human: ENSG00000123130, ACOT9, acyl-CoA thioesterase 9, [Score=160, Expect=9e-42]} {Mouse: ENSMUSG00000025287, Acot9, acyl-CoA thioesterase 9, [Score=160, Expect=3e-42]; ENSMUSG00000047565, Acot10, acyl-CoA thioesterase 10, [Score=160, Expect=4e-42]} {Dmel: FBgn0039855, CG1638, [Score=92.8, Expect=1e-19]} {Celegans: WBGene00019015, F57F4.1, [Score=56.6, Expect=5e-08]} {RNA1509_11448} {RNA1310_8565.1} {RNA815_3024}
8.	MligTC455_04366	654	13.63	Mlig455_052829	Neo: - Age: -	UPF2	0.952	-	-	-	-	-	0.952	Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1}
9.	MligTC455_41936	1214	25.28	Mlig455_010436	Neo: - Age: - Region-enriched R8: 1.436/0.01364 Region-enriched R7: 1.262/0.00860		0.95	-	-	-	0.950	-	-	Mlig455_010436 {REF} {Length: 5050} {RNA1509_10788, RNA1509_21129, RNA1509_21353} {RNA1310_19529.1, RNA1509_10788, RNA1509_21129, RNA1509_21353} {RNA1509_10788, RNA1509_21129, RNA1509_21353, RNA815_12211.1}
10.	MligTC455_44474	391	8.15	Mlig455_049968	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_049968 {REF} {Length: 2261} {TRANSSPLICED} {Pfam: Phage tail fibre adhesin Gp38 [PF05268.13, score=18.3]} {RNA1509_56867} {RNA1310_16217.1} {RNA815_24090}
11.	MligTC455_52670	280	5.84	Mlig455_060776	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.342	DHRS7B	0.95	-	-	-	-	-	0.950	Mlig455_060776 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=124.6]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=90.9]; KR domain [PF08659.12, score=35.4]} {Human: ENSG00000109016, DHRS7B, dehydrogenase/reductase 7B, [RH, Score=192, Expect=1e-58]} {Mouse: ENSMUSG00000042569, Dhrs7b, dehydrogenase/reductase (SDR family) member 7B, [RH, Score=196, Expect=1e-60]} {Dmel: FBgn0027583, CG7601, [RH, Score=207, Expect=1e-64]} {Celegans: WBGene00000993, dhs-30, DeHydrogenases, Short chain, [RH, Score=170, Expect=1e-50]} {Smed: dd_Smed_v6_3512_0_1, dd_Smed_v6_3512_0_1, [RH, Score=191, Expect=1e-58]} {RNA1509_32832, RNA1509_37672} {RNA1310_19773, RNA1509_32832, RNA1509_37672} {RNA1509_32832, RNA1509_37672, RNA815_14850}

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