TomoSeq data search

Data search

Results for MligTC455_33718

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33718

27

0.56

Mlig455_067978

Neo: -

Age: -

Mlig455_067978 {REF} {Length: 1471} {RNA1509_34308} {RNA1310_37957.1} {RNA815_29846}

Cumulative graph for MligTC455_33718

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.23	0.884	0.99977	1.00000
RegionR2	-0.589	0.884	0.99942	1.00000
RegionR3	-0.422	0.884	0.99965	1.00000
RegionR4	0.111	0.884	1.00000	1.00000
RegionR5	-0.448	0.884	0.99928	1.00000
RegionR6	-0.657	0.884	0.99983	1.00000
RegionR7	0.007	0.884	1.00000	1.00000
RegionR8	0.768	0.884	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.921	0.884	0.99925	1.00000
RegenerationR2	1.655	0.884	0.56476	0.90073
RegenerationR3	2.47	0.884	0.54239	0.87900
RegenerationR4	2.026	0.884	0.60452	0.91510
RegenerationR5	1.998	0.884	0.66573	0.93861
RegenerationR6	3.925	0.884	0.51677	0.81798
RegenerationBL	1.708	0.884	0.86960	1.00000
RegenerationTP	-0.98	0.884	0.99991	1.00000

Genes with expression patterns similar to MligTC455_33718

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33718	27	0.56	Mlig455_067978	Neo: - Age: -		2	-	-	-	1.000	1.000	-	Mlig455_067978 {REF} {Length: 1471} {RNA1509_34308} {RNA1310_37957.1} {RNA815_29846}
2.	MligTC455_13277	44	0.92	Mlig455_024664	Neo: - Age: -	KCNIP3	0.978	-	-	-	0.978	-	-	Mlig455_024664 {REF} {Length: 2369} {Pfam: EF-hand domain pair [PF13499.8, score=66.9]; EF hand [PF00036.34, score=57.1]; EF-hand domain [PF13405.8, score=50.7]; EF hand [PF13202.8, score=40.6]; EF-hand domain pair [PF13833.8, score=34.9]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=176, Expect=3e-54]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=171, Expect=2e-52]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=171, Expect=2e-52]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=170, Expect=5e-52]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=173, Expect=2e-53]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=171, Expect=1e-52]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=170, Expect=2e-52]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=168, Expect=2e-51]} {Dmel: FBgn0265595, CG44422, [RH, Score=171, Expect=4e-51]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=142, Expect=8e-42]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [RH, Score=179, Expect=7e-56]} {RNA1509_50772} {RNA1310_28708} {RNA815_34493}
3.	MligTC455_37936	46	0.95	Mlig455_035706	Neo: - Age: Down-Down-Up	CHL1	0.971	-	-	-	0.971	-	-	Mlig455_035706 {REF} {Length: 3149} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=60.6]; Immunoglobulin domain [PF13927.8, score=22.3]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=55.5, Expect=2e-07]; ENSG00000091129, NRCAM, neuronal cell adhesion molecule, [Score=53.5, Expect=2e-06]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [RH, Score=51.6, Expect=9e-07]} {Smed: dd_Smed_v6_9155_0_2, dd_Smed_v6_9155_0_2, [RH, Score=53.9, Expect=3e-07]} {RNA1509_1785} {RNA1310_5625, RNA1509_1785} {RNA1509_1785, RNA815_1660}
4.	MligTC455_20865	13	0.27	Mlig455_024704	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.358	NPDC1	0.969	-	-	-	0.969	-	-	Mlig455_024704 {REF} {Length: 2707} {Pfam: Neural proliferation differentiation control-1 protein (NPDC1) [PF06809.13, score=109.7]} {Human: ENSG00000107281, NPDC1, neural proliferation, differentiation and control 1, [RH, Score=114, Expect=1e-29]} {Mouse: ENSMUSG00000015094, Npdc1, neural proliferation, differentiation and control 1, [RH, Score=110, Expect=2e-28]} {Dmel: FBgn0265182, CG44247, [RH, Score=118, Expect=3e-30]} {Celegans: WBGene00000277, cab-1, [RH, Score=76.3, Expect=8e-16]} {Smed: dd_Smed_v6_2985_0_1, dd_Smed_v6_2985_0_1, [Score=94.0, Expect=5e-23]} {RNA1509_28907, RNA1509_49979} {RNA1310_7418, RNA1509_28907} {RNA1509_28907, RNA815_1669.1}
5.	MligTC455_11185	36	0.75	Mlig455_042266	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_042266 {REF} {Length: 1065} {NoTransDecoderORF} {RNA1509_37183} {RNA1310_68417}
6.	MligTC455_52346	25	0.52	Mlig455_054268	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_054268 {REF} {Length: 2021} {NoTransDecoderORF} {RNA1509_28752} {RNA1310_23997.1} {RNA815_18824.1}
7.	MligTC455_21207	31	0.64	Mlig455_006965	Neo: - Age: Up-Down-Down		0.963	-	-	-	0.963	-	-	Mlig455_006965 {REF} {Length: 2337} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=175.8]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_29341_0_1, dd_Smed_v6_29341_0_1, [Score=106, Expect=4e-24]} {RNA1509_40591} {RNA1310_76300} {RNA815_33175.1}
8.	MligTC455_06794	27	0.56	Mlig455_053654	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_053654 {REF} {Length: 543} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=26.6]; Protein of unknown function (DUF445) [PF04286.14, score=26.0]}
9.	MligTC455_15892	64	1.33	Mlig455_041852	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_041852 {REF} {Length: 906} {Pfam: Domain of unknown function (DUF1724) [PF08350.12, score=23.7]; Bacterial AMP nucleoside phosphorylase N-terminus [PF10423.11, score=19.1]} {RNA1509_8496} {RNA1310_11746} {RNA815_63261}
10.	MligTC455_25675	122	2.55	Mlig455_058490	Neo: - Age: -	PUS1	0.959	-	-	-	0.959	-	-	Mlig455_058490 {REF} {Length: 2579} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=47.6]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [Score=208, Expect=1e-63]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [Score=209, Expect=7e-64]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [Score=204, Expect=5e-62]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [Score=185, Expect=8e-55]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [Score=235, Expect=8e-75]} {RNA1509_36652} {RNA1310_11912} {RNA815_6183.1}
11.	MligTC455_23056	88	1.84	Mlig455_034100, Mlig455_034111	Neo: - Age: - Region-enriched R7: 3.593/0.02491	KCNV2	0.957	-	-	-	0.957	-	-	Mlig455_034100 {REF} {Length: 3594} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497} Mlig455_034111 {REF} {Length: 3636} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497}
12.	MligTC455_37930	29	0.6	Mlig455_051992	Neo: - Age: -		0.957	-	-	-	0.957	-	-	Mlig455_051992 {REF} {Length: 964} {RNA1310_37966.1} {RNA815_21346}
13.	MligTC455_38456	1125	23.43	Mlig455_065743	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.509 Region-enriched R3: 1.173/0.00420	PHYH	0.955	-	-	-	-	0.955	-	Mlig455_065743 {REF} {Length: 1936} {TRANSSPLICED} {Pfam: Phytanoyl-CoA dioxygenase (PhyH) [PF05721.15, score=143.6]} {Human: ENSG00000107537, PHYH, phytanoyl-CoA 2-hydroxylase, [RH, Score=332, Expect=3e-113]} {Mouse: ENSMUSG00000026664, Phyh, phytanoyl-CoA hydroxylase, [RH, Score=327, Expect=1e-111]} {Dmel: FBgn0037819, CG14688, [Score=48.1, Expect=4e-06]} {Celegans: WBGene00014000, ZK550.6, Probable phytanoyl-CoA dioxygenase, [RH, Score=331, Expect=6e-114]} {Smed: dd_Smed_v6_8029_0_1, dd_Smed_v6_8029_0_1, [Score=54.7, Expect=1e-08]} {RNA1509_44457, RNA1509_9637} {RNA1310_18056.1, RNA1509_44457, RNA1509_9637} {RNA1509_44457, RNA1509_9637, RNA815_7280.1}
14.	MligTC455_16290	424	8.83	Mlig455_012500, Mlig455_012589	Neo: - Age: logFC(26M/2M)=-0.374 Region-enriched R5: 3.298/0.00068 Region-enriched R4: 3.099/0.03444	SLC29A1	0.953	-	-	-	-	0.953	-	Mlig455_012500 {REF} {Length: 3324} {Pfam: Nucleoside transporter [PF01733.20, score=230.1]} {Human: ENSG00000112759, SLC29A1, solute carrier family 29 member 1 (Augustine blood group), [Score=153, Expect=1e-40]; ENSG00000198246, SLC29A3, solute carrier family 29 member 3, [Score=148, Expect=1e-38]} {Mouse: ENSMUSG00000023942, Slc29a1, solute carrier family 29 (nucleoside transporters), member 1, [Score=150, Expect=6e-40]; ENSMUSG00000024891, Slc29a2, solute carrier family 29 (nucleoside transporters), member 2, [Score=143, Expect=4e-37]} {Dmel: FBgn0263916, Ent2, Equilibrative nucleoside transporter 2, [RH, Score=264, Expect=1e-82]} {Celegans: WBGene00001320, ent-1, Equilibrative Nucleoside Transporter; Equilibrative nucleoside transporter 1, [RH, Score=240, Expect=6e-74]} {Smed: dd_Smed_v6_6848_0_1, dd_Smed_v6_6848_0_1, [Score=153, Expect=2e-41]} {RNA1509_15022, RNA1509_52896} {RNA1310_8593.2, RNA1509_15022, RNA1509_52896} {RNA1509_15022, RNA1509_52896, RNA815_5676.1} Mlig455_012589 {REF} {Length: 3121} {Pfam: Nucleoside transporter [PF01733.20, score=230.1]} {Human: ENSG00000112759, SLC29A1, solute carrier family 29 member 1 (Augustine blood group), [Score=153, Expect=1e-40]; ENSG00000198246, SLC29A3, solute carrier family 29 member 3, [Score=148, Expect=1e-38]} {Mouse: ENSMUSG00000023942, Slc29a1, solute carrier family 29 (nucleoside transporters), member 1, [Score=150, Expect=6e-40]; ENSMUSG00000024891, Slc29a2, solute carrier family 29 (nucleoside transporters), member 2, [Score=143, Expect=4e-37]} {Dmel: FBgn0263916, Ent2, Equilibrative nucleoside transporter 2, [RH, Score=264, Expect=1e-82]} {Celegans: WBGene00001320, ent-1, Equilibrative Nucleoside Transporter; Equilibrative nucleoside transporter 1, [RH, Score=240, Expect=6e-74]} {Smed: dd_Smed_v6_6848_0_1, dd_Smed_v6_6848_0_1, [Score=153, Expect=2e-41]} {RNA1509_15022} {RNA1310_8593.2} {RNA815_5676.1}
15.	MligTC455_45114	22	0.46	Mlig455_024602	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_024602 {REF} {Length: 3113} {NoTransDecoderORF} {RNA1310_56049}
16.	MligTC455_25641	49	1.02	Mlig455_055675	Neo: - Age: -	ANK1	0.951	-	-	-	0.951	-	-	Mlig455_055675 {REF} {Length: 4132} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=135.4]; Ankyrin repeats (many copies) [PF13637.8, score=134.8]; Ankyrin repeat [PF00023.32, score=94.0]; Ankyrin repeat [PF13606.8, score=91.5]; Ankyrin repeats (many copies) [PF13857.8, score=76.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=144, Expect=1e-37]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=140, Expect=5e-36]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=134, Expect=3e-34]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=142, Expect=4e-37]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=122, Expect=2e-30]} {RNA1509_45640} {RNA1310_13359.1} {RNA815_36354}

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