Data search


search
Exact
Search

Results for MligTC455_34220

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34220 97 2.03 Mlig455_058659

Neo: -

Age: -

Mlig455_058659 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_30941} {RNA1310_13121} {RNA815_19376}

Cumulative graph for MligTC455_34220

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.376 1.893 0.68321 1.00000
RegionR2 0.952 1.893 0.48010 0.86425
RegionR3 -0.174 1.893 0.91749 1.00000
RegionR4 1.078 1.893 0.35572 0.67815
RegionR5 -0.315 1.893 0.93777 1.00000
RegionR6 -0.393 1.893 0.94921 1.00000
RegionR7 1.522 1.893 0.33936 0.97588
RegionR8 -0.294 1.893 0.96184 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.457 1.893 0.78260 1.00000
RegenerationR2 0.741 1.893 0.26549 0.71192
RegenerationR3 1.194 1.893 0.24297 0.67756
RegenerationR4 0.448 1.893 0.59486 0.91117
RegenerationR5 1.176 1.893 0.17507 0.60427
RegenerationR6 1.877 1.893 0.05891 0.30463
RegenerationBL 0.68 1.893 0.62391 0.96666
RegenerationTP 1.261 1.893 0.44203 0.86141


Genes with expression patterns similar to MligTC455_34220

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34220 97 2.03 Mlig455_058659

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000 Mlig455_058659 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_30941} {RNA1310_13121} {RNA815_19376}
2. MligTC455_34221 101 2.1 Mlig455_061426

Neo: -

Age: -

3.842 - - 0.982 0.964 0.981 0.915 Mlig455_061426 {REF} {Length: 1527} {NoTransDecoderORF} {RNA1509_46811} {RNA1310_13121} {RNA815_39889}
3. MligTC455_57036 84 1.75 Mlig455_033607

Neo: -

Age: -

3.834 - - 0.944 0.960 0.967 0.963 Mlig455_033607 {REF} {Length: 266} {Pfam: Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=22.1]} {RNA1509_46811} {RNA1310_82283} {RNA815_19376}
4. MligTC455_34216 106 2.2 Mlig455_015400

Neo: -

Age: -

3.805 - - 0.947 0.924 0.974 0.960 Mlig455_015400 {REF} {Length: 506} {NoTransDecoderORF} {RNA1509_46811} {RNA1310_13121} {RNA815_19376}
5. MligTC455_13513 94 1.95 Mlig455_040445

Neo: -

Age: -

3.802 - - 0.947 0.928 0.966 0.961 Mlig455_040445 {REF} {Length: 306} {RNA1509_38807} {RNA1310_82283} {RNA815_19376}
6. MligTC455_09146 82 1.71 Mlig455_021232

Neo: -

Age: -

3.8 - - 0.947 0.949 0.938 0.966 Mlig455_021232 {REF} {Length: 298} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
7. MligTC455_02889 93 1.94 Mlig455_059386

Neo: -

Age: -

3.771 - - 0.951 0.882 0.962 0.976 Mlig455_059386 {REF} {Length: 310} {NoTransDecoderORF} {RNA1509_46811} {RNA1310_82283} {RNA815_19376}
8. MligTC455_54723 94 1.96 Mlig455_069765

Neo: -

Age: -

3.765 - - 0.945 0.912 0.942 0.966 Mlig455_069765 {REF} {Length: 94} {NoTransDecoderORF} {RNA1509_47134} {RNA1310_82283} {RNA815_61293}
9. MligTC455_14112 88 1.83 Mlig455_015700

Neo: -

Age: -

3.748 - - 0.939 0.909 0.919 0.981 Mlig455_015700 {REF} {Length: 936} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
10. MligTC455_01924 85 1.78 Mlig455_054751

Neo: -

Age: -

3.731 - - 0.955 0.908 0.957 0.911 Mlig455_054751 {REF} {Length: 325} {RNA1509_30941} {RNA1310_13121} {RNA815_19376}
11. MligTC455_54456 89 1.85 Mlig455_047500

Neo: -

Age: -

3.666 - - 0.915 0.871 0.928 0.952 Mlig455_047500 {REF} {Length: 437} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
12. MligTC455_34218 200 4.17 Mlig455_036585, Mlig455_036615

Neo: -

Age: -

3.627 - - 0.924 0.873 0.872 0.958

Mlig455_036585 {REF} {Length: 426} {NoTransDecoderORF} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}

Mlig455_036615 {REF} {Length: 1082} {RNA1509_30941, RNA1509_47134} {RNA1310_13121, RNA1509_47134} {RNA1509_47134, RNA815_19376}
13. MligTC455_34224 312 6.5 Mlig455_015246, Mlig455_056676, Mlig455_070843

Neo: -

Age: -

2.715 - - 0.950 0.836 0.929 -

Mlig455_015246 {REF} {Length: 251} {RNA1509_46811} {RNA1310_82283} {RNA815_19376}

Mlig455_056676 {REF} {Length: 366} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}

Mlig455_070843 {REF} {Length: 312} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
14. MligTC455_34397 939 19.56 Mlig455_030525

Neo: -

Age: Down-Up-Down

SMIM29 0.957 - - - - 0.957 - Mlig455_030525 {REF} {Length: 2705} {TRANSSPLICED} {Pfam: TMEM154 protein family [PF15102.8, score=21.6]; Sulfite exporter TauE/SafE [PF01925.21, score=19.0]} {Human: ENSG00000186577, SMIM29, small integral membrane protein 29, [Score=44.3, Expect=5e-06]} {Smed: dd_Smed_v6_11346_0_1, dd_Smed_v6_11346_0_1, [Score=51.2, Expect=4e-09]} {RNA1509_18857, RNA1509_20792, RNA1509_31156, RNA1509_48239, RNA1509_54578} {RNA1310_27250, RNA1509_18857, RNA1509_20792, RNA1509_31156, RNA1509_48239, RNA1509_54578} {RNA1509_18857, RNA1509_20792, RNA1509_31156, RNA1509_48239, RNA1509_54578, RNA815_12867}
15. MligTC455_35592 184 3.84 Mlig455_062155

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.656

0.956 - - - - 0.956 - Mlig455_062155 {REF} {Length: 1849} {RNA1509_33655} {RNA1310_17820.1, RNA1509_33655} {RNA1509_33655, RNA815_11646}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA