TomoSeq data search

Data search

Results for MligTC455_34319

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34319

5

0.10

Mlig455_058865

Neo: -

Age: -

MSI2

Mlig455_058865 {REF} {Length: 1158} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.2]; RNA recognition motif [PF16367.7, score=20.0]} {Human: ENSG00000153944, MSI2, musashi RNA binding protein 2, [Score=120, Expect=1e-33]} {Mouse: ENSMUSG00000069769, Msi2, musashi RNA-binding protein 2, [RH, Score=122, Expect=3e-36]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=120, Expect=7e-34]} {Celegans: WBGene00003423, msi-1, MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1, [Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_8902_0_1, dd_Smed_v6_8902_0_1, [Score=145, Expect=1e-42]} {RNA1509_2174} {RNA1310_73027} {RNA815_1264}

Cumulative graph for MligTC455_34319

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_34319

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34319	5	0.1	Mlig455_058865	Neo: - Age: -	MSI2	1	-	-	-	-	1.000	-	Mlig455_058865 {REF} {Length: 1158} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.2]; RNA recognition motif [PF16367.7, score=20.0]} {Human: ENSG00000153944, MSI2, musashi RNA binding protein 2, [Score=120, Expect=1e-33]} {Mouse: ENSMUSG00000069769, Msi2, musashi RNA-binding protein 2, [RH, Score=122, Expect=3e-36]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=120, Expect=7e-34]} {Celegans: WBGene00003423, msi-1, MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1, [Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_8902_0_1, dd_Smed_v6_8902_0_1, [Score=145, Expect=1e-42]} {RNA1509_2174} {RNA1310_73027} {RNA815_1264}
2.	MligTC455_12900	29	0.6	Mlig455_027668	Neo: - Age: -		0.996	-	-	-	-	0.996	-	Mlig455_027668 {REF} {Length: 1792} {NoTransDecoderORF} {RNA1509_41695} {RNA1310_58090} {RNA815_19385}
3.	MligTC455_43887	6	0.13	Mlig455_029485, Mlig455_029504	Neo: - Age: -	SGPP1	0.995	-	-	-	-	0.995	-	Mlig455_029485 {REF} {Length: 1598} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=72.1]; PAP2 superfamily [PF14378.8, score=26.2]} {Human: ENSG00000126821, SGPP1, sphingosine-1-phosphate phosphatase 1, [RH, Score=261, Expect=3e-82]; ENSG00000285281, SGPP1, sphingosine-1-phosphate phosphatase 1, [RH, Score=261, Expect=3e-82]} {Mouse: ENSMUSG00000021054, Sgpp1, sphingosine-1-phosphate phosphatase 1, [RH, Score=273, Expect=5e-87]} {Smed: dd_Smed_v6_4050_0_1, dd_Smed_v6_4050_0_1, [RH, Score=161, Expect=2e-45]} {RNA1509_3032} {RNA1310_2972.1} {RNA815_1921} Mlig455_029504 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=72.1]; PAP2 superfamily [PF14378.8, score=26.2]} {Human: ENSG00000126821, SGPP1, sphingosine-1-phosphate phosphatase 1, [RH, Score=261, Expect=3e-82]; ENSG00000285281, SGPP1, sphingosine-1-phosphate phosphatase 1, [RH, Score=261, Expect=3e-82]} {Mouse: ENSMUSG00000021054, Sgpp1, sphingosine-1-phosphate phosphatase 1, [RH, Score=273, Expect=5e-87]} {Smed: dd_Smed_v6_4050_0_1, dd_Smed_v6_4050_0_1, [RH, Score=161, Expect=2e-45]} {RNA1509_3032} {RNA1310_2972.1} {RNA815_1921}
4.	MligTC455_23145	43	0.91	Mlig455_014752	Neo: - Age: logFC(26M/2M)=-0.605	AC243734.1	0.981	-	-	-	-	0.981	-	Mlig455_014752 {REF} {Length: 3129} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=213.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=186.0]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=425, Expect=1e-143]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=421, Expect=4e-142]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [RH, Score=429, Expect=1e-145]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [RH, Score=491, Expect=7e-166]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [RH, Score=402, Expect=5e-135]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [RH, Score=486, Expect=1e-167]} {RNA1310_22414.1} {RNA815_34255}
5.	MligTC455_55843	12	0.25	Mlig455_014566	Neo: - Age: - Regeneration-upregulated R2: 4.698 Regeneration-enriched R2: 4.698		0.979	-	-	-	-	0.979	-	Mlig455_014566 {REF} {Length: 2456} {Pfam: C2 domain [PF00168.32, score=30.3]}
6.	MligTC455_07377	12	0.25	Mlig455_050202, Mlig455_066952	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_050202 {REF} {Length: 183} {NoTransDecoderORF} {RNA1310_52242} Mlig455_066952 {REF} {Length: 141} {NoTransDecoderORF} {RNA1310_52242}
7.	MligTC455_47373	30	0.63	Mlig455_050214, Mlig455_050224	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_050214 {REF} {Length: 754} {RNA1310_130371} Mlig455_050224 {REF} {Length: 769} {RNA1310_130371}
8.	MligTC455_44701	13	0.28	Mlig455_015346	Neo: - Age: -	LHX5	0.967	-	-	-	-	0.967	-	Mlig455_015346 {REF} {Length: 1954} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=93.9]; Homeodomain [PF00046.31, score=43.3]} {Human: ENSG00000089116, LHX5, LIM homeobox 5, [Score=176, Expect=5e-50]; ENSG00000274577, LHX1, LIM homeobox 1, [Score=169, Expect=2e-47]; ENSG00000273706, LHX1, LIM homeobox 1, [Score=169, Expect=2e-47]} {Mouse: ENSMUSG00000029595, Lhx5, LIM homeobox protein 5, [Score=176, Expect=3e-50]; ENSMUSG00000018698, Lhx1, LIM homeobox protein 1, [Score=168, Expect=2e-47]} {Dmel: FBgn0026411, Lim1, LIM homeobox 1, [Score=256, Expect=4e-80]} {Celegans: WBGene00003000, lin-11, [Score=127, Expect=2e-32]} {Smed: dd_Smed_v6_8252_0_1, dd_Smed_v6_8252_0_1, [Score=152, Expect=3e-42]} {RNA1310_35653} {RNA815_24965}
9.	MligTC455_17243	5	0.11	Mlig455_027608	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_027608 {REF} {Length: 437} {NoTransDecoderORF}
10.	MligTC455_13635	16	0.33	Mlig455_014568	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_014568 {REF} {Length: 1825}
11.	MligTC455_17130	13	0.27	Mlig455_053033	Neo: Irradiation Age: -		0.961	-	-	-	-	0.961	-	Mlig455_053033 {REF} {Length: 2999} {RNA1509_8183} {RNA1310_4256} {RNA815_2602}
12.	MligTC455_26670	30	0.63	Mlig455_038101	Neo: - Age: Down-Up-Down		0.96	-	-	-	-	0.960	-	Mlig455_038101 {REF} {Length: 4113} {RNA1509_13764} {RNA1310_87.2} {RNA815_3880}
13.	MligTC455_19775	36	0.74	Mlig455_060359	Neo: - Age: -	FCN1	0.959	-	-	-	-	0.959	-	Mlig455_060359 {REF} {Length: 1109} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=120.9]} {Human: ENSG00000085265, FCN1, ficolin 1, [Score=99.0, Expect=2e-23]; ENSG00000142748, FCN3, ficolin 3, [Score=99.0, Expect=1e-23]; ENSG00000160339, FCN2, ficolin 2, [Score=98.2, Expect=2e-23]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=100, Expect=3e-24]} {Dmel: FBgn0034160, CG5550, [Score=97.8, Expect=7e-24]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=90.1, Expect=4e-20]} {RNA1310_67383} {RNA815_45536}
14.	MligTC455_18616	112	2.32	Mlig455_003658, Mlig455_003870	Neo: - Age: Up-Down-Down	TUT4	0.954	-	-	-	-	0.954	-	Mlig455_003658 {REF} {Length: 5734} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=173.1]; Cid1 family poly A polymerase [PF03828.21, score=66.6]; Zinc knuckle [PF00098.25, score=18.7]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=124, Expect=4e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=205, Expect=3e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=259, Expect=5e-70]} {RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1310_1393.1, RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1509_51224, RNA1509_53960, RNA1509_5815, RNA815_619} Mlig455_003870 {REF} {Length: 5673} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=172.7]; Cid1 family poly A polymerase [PF03828.21, score=67.3]; Zinc knuckle [PF00098.25, score=19.0]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=123, Expect=7e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=204, Expect=9e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=262, Expect=3e-71]} {RNA1509_5815} {RNA1310_1393.1} {RNA815_619}
15.	MligTC455_43700	28	0.58	Mlig455_047711	Neo: - Age: - Regeneration-upregulated R2: 3.521 Regeneration-enriched R2: 3.521	LZTS3	0.953	-	-	-	-	0.953	-	Mlig455_047711 {REF} {Length: 3139} {Pfam: Fez1 [PF06818.17, score=51.8]} {Human: ENSG00000088899, LZTS3, leucine zipper tumor suppressor family member 3, [Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_9487_0_1, dd_Smed_v6_9487_0_1, [RH, Score=65.1, Expect=5e-11]} {RNA1509_57436} {RNA1310_22131} {RNA815_51549}
16.	MligTC455_19569	25	0.52	Mlig455_062568	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_062568 {REF} {Length: 3003} {Pfam: Ammonium Transporter Family [PF00909.23, score=417.1]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [Score=136, Expect=9e-34]} {Celegans: WBGene00000133, amt-1, Putative ammonium transporter 1, [Score=342, Expect=2e-110]} {RNA1509_18736} {RNA1310_67592} {RNA815_52315}

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