Data search
Results for MligTC455_34711
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34711 | 1445 | 30.11 | Mlig455_051634, Mlig455_061998 | Neo: - Age: - Region-enriched R4: 1.537/0.00193 |
SDHAF3 | Mlig455_051634 {REF} {Length: 2779} {Pfam: Complex1_LYR-like [PF13233.8, score=62.5]; Complex 1 protein (LYR family) [PF05347.17, score=38.9]} {Human: ENSG00000196636, SDHAF3, succinate dehydrogenase complex assembly factor 3, [RH, Score=83.2, Expect=8e-21]} {Mouse: ENSMUSG00000042505, Sdhaf3, succinate dehydrogenase complex assembly factor 3, [RH, Score=87.0, Expect=2e-22]} {Dmel: FBgn0038437, Sdhaf3, Succinate dehydrogenase assembly factor 3, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00009139, F25H9.7, [RH, Score=57.4, Expect=4e-11]} {Smed: dd_Smed_v6_8316_0_1, dd_Smed_v6_8316_0_1, [RH, Score=84.0, Expect=1e-21]} {RNA1509_39733} {RNA1310_36694} {RNA815_22183.1} Mlig455_061998 {REF} {Length: 3730} {Pfam: Complex1_LYR-like [PF13233.8, score=62.0]; Complex 1 protein (LYR family) [PF05347.17, score=37.7]} {Human: ENSG00000196636, SDHAF3, succinate dehydrogenase complex assembly factor 3, [RH, Score=83.2, Expect=8e-21]} {Mouse: ENSMUSG00000042505, Sdhaf3, succinate dehydrogenase complex assembly factor 3, [RH, Score=86.7, Expect=3e-22]} {Dmel: FBgn0038437, Sdhaf3, Succinate dehydrogenase assembly factor 3, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00009139, F25H9.7, [RH, Score=57.4, Expect=3e-11]} {Smed: dd_Smed_v6_8316_0_1, dd_Smed_v6_8316_0_1, [RH, Score=84.0, Expect=1e-21]} {RNA1509_39733} {RNA1310_36694} {RNA815_22183.1} |
Cumulative graph for MligTC455_34711
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.78 | 5.044 | 0.39947 | 1.00000 | |
| RegionR2 | -0.634 | 5.044 | 0.11371 | 0.41696 | |
| RegionR3 | -0.043 | 5.044 | 0.89763 | 1.00000 | |
| RegionR4 | 1.537 | 5.044 | 0.00013 | 0.00193 | |
| RegionR5 | 1.078 | 5.044 | 0.00036 | 0.00456 | |
| RegionR6 | 0.065 | 5.044 | 0.84489 | 1.00000 | |
| RegionR7 | -0.379 | 5.044 | 0.36698 | 1.00000 | |
| RegionR8 | -0.844 | 5.044 | 0.11111 | 0.61898 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.231 | 5.044 | 0.25217 | 0.96697 | |
| RegenerationR2 | -0.636 | 5.044 | 0.08873 | 0.47719 | |
| RegenerationR3 | -0.136 | 5.044 | 0.72407 | 0.95589 | |
| RegenerationR4 | -0.507 | 5.044 | 0.19863 | 0.64439 | |
| RegenerationR5 | -0.375 | 5.044 | 0.29780 | 0.72547 | |
| RegenerationR6 | -0.248 | 5.044 | 0.53617 | 0.83045 | |
| RegenerationBL | 0.362 | 5.044 | 0.38426 | 0.75285 | |
| RegenerationTP | 0.373 | 5.044 | 0.42826 | 0.85141 |
Genes with expression patterns similar to MligTC455_34711
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34711 | 1445 | 30.11 | Mlig455_051634, Mlig455_061998 | Neo: - Age: - Region-enriched R4: 1.537/0.00193 |
SDHAF3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051634 {REF} {Length: 2779} {Pfam: Complex1_LYR-like [PF13233.8, score=62.5]; Complex 1 protein (LYR family) [PF05347.17, score=38.9]} {Human: ENSG00000196636, SDHAF3, succinate dehydrogenase complex assembly factor 3, [RH, Score=83.2, Expect=8e-21]} {Mouse: ENSMUSG00000042505, Sdhaf3, succinate dehydrogenase complex assembly factor 3, [RH, Score=87.0, Expect=2e-22]} {Dmel: FBgn0038437, Sdhaf3, Succinate dehydrogenase assembly factor 3, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00009139, F25H9.7, [RH, Score=57.4, Expect=4e-11]} {Smed: dd_Smed_v6_8316_0_1, dd_Smed_v6_8316_0_1, [RH, Score=84.0, Expect=1e-21]} {RNA1509_39733} {RNA1310_36694} {RNA815_22183.1} Mlig455_061998 {REF} {Length: 3730} {Pfam: Complex1_LYR-like [PF13233.8, score=62.0]; Complex 1 protein (LYR family) [PF05347.17, score=37.7]} {Human: ENSG00000196636, SDHAF3, succinate dehydrogenase complex assembly factor 3, [RH, Score=83.2, Expect=8e-21]} {Mouse: ENSMUSG00000042505, Sdhaf3, succinate dehydrogenase complex assembly factor 3, [RH, Score=86.7, Expect=3e-22]} {Dmel: FBgn0038437, Sdhaf3, Succinate dehydrogenase assembly factor 3, [RH, Score=88.2, Expect=4e-23]} {Celegans: WBGene00009139, F25H9.7, [RH, Score=57.4, Expect=3e-11]} {Smed: dd_Smed_v6_8316_0_1, dd_Smed_v6_8316_0_1, [RH, Score=84.0, Expect=1e-21]} {RNA1509_39733} {RNA1310_36694} {RNA815_22183.1} |
| 2. | MligTC455_26994 | 250 | 5.2 | Mlig455_032952 | Neo: - Age: - |
GTPBP2 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_032952 {REF} {Length: 4484} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=75.7]; hAT family C-terminal dimerisation region [PF05699.16, score=47.0]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=20.1]} {Human: ENSG00000172432, GTPBP2, GTP binding protein 2, [Score=408, Expect=3e-129]} {Mouse: ENSMUSG00000023952, Gtpbp2, GTP binding protein 2, [Score=408, Expect=3e-129]} {Dmel: FBgn0037391, CG2017, [Score=358, Expect=8e-111]} {Celegans: WBGene00011449, T04H1.2, [RH, Score=350, Expect=4e-108]} {Smed: dd_Smed_v6_10435_0_1, dd_Smed_v6_10435_0_1, [RH, Score=329, Expect=2e-98]} {RNA1509_39291} {RNA1310_9075} {RNA815_7492} |
| 3. | MligTC455_44247 | 1047 | 21.82 | Mlig455_017698 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_017698 {REF} {Length: 789} {TRANSSPLICED} {RNA1509_28598, RNA1509_58793} {RNA1310_18791, RNA1509_28598, RNA1509_58793} {RNA1509_28598, RNA1509_58793, RNA815_10594.2} | |
| 4. | MligTC455_28615 | 2862 | 59.62 | Mlig455_003156, Mlig455_003355 | Neo: - Age: logFC(26M/2M)=0.173 Regeneration-upregulated BL: 1.575 Regeneration-enriched BL: 1.575 |
TOP2A | 0.959 | - | - | 0.959 | - | - | - | Mlig455_003156 {REF} {Length: 5456} {TRANSSPLICED} {Pfam: DNA gyrase/topoisomerase IV, subunit A [PF00521.22, score=419.8]; C-terminal associated domain of TOPRIM [PF16898.7, score=159.7]} {Human: ENSG00000131747, TOP2A, DNA topoisomerase II alpha, [Score=917, Expect=0.0]; ENSG00000077097, TOP2B, DNA topoisomerase II beta, [Score=899, Expect=0.0]} {Mouse: ENSMUSG00000020914, Top2a, topoisomerase (DNA) II alpha, [Score=931, Expect=0.0]; ENSMUSG00000017485, Top2b, topoisomerase (DNA) II beta, [Score=901, Expect=0.0]} {Dmel: FBgn0284220, Top2, Topoisomerase 2, [Score=813, Expect=0.0]} {Celegans: WBGene00010785, top-2, Probable DNA topoisomerase 2, [Score=834, Expect=0.0]} {Smed: dd_Smed_v6_1626_0_2, dd_Smed_v6_1626_0_2, [Score=855, Expect=0.0]} {RNA1509_1320} {RNA1310_913.1, RNA1509_1320} {RNA1509_1320, RNA815_273.1} Mlig455_003355 {REF} {Length: 5877} {Pfam: DNA gyrase/topoisomerase IV, subunit A [PF00521.22, score=417.1]; C-terminal associated domain of TOPRIM [PF16898.7, score=159.1]; DNA gyrase B [PF00204.27, score=85.8]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=55.8]; Toprim domain [PF01751.24, score=33.6]} {Human: ENSG00000131747, TOP2A, DNA topoisomerase II alpha, [RH, Score=1559, Expect=0.0]; ENSG00000077097, TOP2B, DNA topoisomerase II beta, [RH, Score=1557, Expect=0.0]} {Mouse: ENSMUSG00000020914, Top2a, topoisomerase (DNA) II alpha, [RH, Score=1576, Expect=0.0]; ENSMUSG00000017485, Top2b, topoisomerase (DNA) II beta, [RH, Score=1564, Expect=0.0]} {Dmel: FBgn0284220, Top2, Topoisomerase 2, [RH, Score=1434, Expect=0.0]} {Celegans: WBGene00010785, top-2, Probable DNA topoisomerase 2, [RH, Score=1422, Expect=0.0]} {Smed: dd_Smed_v6_1626_0_2, dd_Smed_v6_1626_0_2, [RH, Score=1434, Expect=0.0]} {RNA1509_1320} {RNA1310_913.1} {RNA815_273.1} |
| 5. | MligTC455_27208 | 670 | 13.95 | Mlig455_042079 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.323/0.00029 |
0.952 | - | - | 0.952 | - | - | - | Mlig455_042079 {REF} {Length: 1743} {NoTransDecoderORF} {RNA1509_19104} {RNA1310_30704} {RNA815_17804} |