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Results for MligTC455_35001

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35001 1233 25.68 Mlig455_049852, Mlig455_063818, Mlig455_069989

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.416

 NOTCH1, SVEP1

Mlig455_049852 {REF} {Length: 1497} {Pfam: EGF-like domain [PF00008.29, score=23.5]; EGF-like domain [PF07974.15, score=19.5]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=53.9, Expect=1e-07]; ENSG00000074181, NOTCH3, notch 3, [Score=53.1, Expect=2e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=56.6, Expect=8e-09]} {RNA1509_48097} {RNA1310_28757} {RNA815_6559}

Mlig455_063818 {REF} {Length: 1417} {Pfam: EGF-like domain [PF00008.29, score=23.6]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=6e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=48.9, Expect=5e-06]} {RNA1509_48097} {RNA1310_28757} {RNA815_6559}

Mlig455_069989 {REF} {Length: 2965} {Pfam: EGF-like domain [PF00008.29, score=24.4]; EGF-like domain [PF07974.15, score=21.5]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=54.3, Expect=1e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=56.2, Expect=2e-08]} {Celegans: WBGene00013486, egas-1, EGF plus ASC domain ion channel, [Score=46.2, Expect=1e-05]} {RNA1509_48097} {RNA1310_15482} {RNA815_16285}

Cumulative graph for MligTC455_35001

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.971 4.797 0.17150 0.79716
RegionR2 0.456 4.797 0.39658 0.79086
RegionR3 -0.027 4.797 0.96184 1.00000
RegionR4 0.426 4.797 0.44329 0.77199
RegionR5 -0.557 4.797 0.27684 0.60360
RegionR6 -0.049 4.797 0.92684 1.00000
RegionR7 0.694 4.797 0.22810 0.84996
RegionR8 1.027 4.797 0.10181 0.59751

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.351 4.797 0.13905 0.87579
RegenerationR2 -0.047 4.797 0.91813 1.00000
RegenerationR3 0.41 4.797 0.44491 0.82985
RegenerationR4 0.604 4.797 0.27076 0.71660
RegenerationR5 1.237 4.797 0.01772 0.23183
RegenerationR6 0.853 4.797 0.10999 0.40979
RegenerationBL -0.252 4.797 0.63475 0.97463
RegenerationTP 0.287 4.797 0.60100 0.96140


Genes with expression patterns similar to MligTC455_35001

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35001 1233 25.68 Mlig455_049852, Mlig455_063818, Mlig455_069989

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.416

 NOTCH1, SVEP1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_049852 {REF} {Length: 1497} {Pfam: EGF-like domain [PF00008.29, score=23.5]; EGF-like domain [PF07974.15, score=19.5]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=53.9, Expect=1e-07]; ENSG00000074181, NOTCH3, notch 3, [Score=53.1, Expect=2e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=56.6, Expect=8e-09]} {RNA1509_48097} {RNA1310_28757} {RNA815_6559}

Mlig455_063818 {REF} {Length: 1417} {Pfam: EGF-like domain [PF00008.29, score=23.6]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=6e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=48.9, Expect=5e-06]} {RNA1509_48097} {RNA1310_28757} {RNA815_6559}

Mlig455_069989 {REF} {Length: 2965} {Pfam: EGF-like domain [PF00008.29, score=24.4]; EGF-like domain [PF07974.15, score=21.5]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=54.3, Expect=1e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=56.2, Expect=2e-08]} {Celegans: WBGene00013486, egas-1, EGF plus ASC domain ion channel, [Score=46.2, Expect=1e-05]} {RNA1509_48097} {RNA1310_15482} {RNA815_16285}
2. MligTC455_41595 483 10.07 Mlig455_065096

Neo: -

Age: -

 1.771 - - 0.950 - 0.821 - Mlig455_065096 {REF} {Length: 1103} {RNA1310_35732} {RNA815_16408}
3. MligTC455_44300 1386 28.88 Mlig455_000467

Neo: -

Age: -

Region-enriched R2: 1.856/0.03510

 1.754 - - 0.979 - 0.775 - Mlig455_000467 {REF} {Length: 459} {NoTransDecoderORF} {RNA1509_16536} {RNA1310_30744} {RNA815_13864}
4. MligTC455_36102 672 13.99 Mlig455_043535

Neo: -

Age: -

 CUX1 1.744 - - - 0.792 - 0.952 Mlig455_043535 {REF} {Length: 4531} {Pfam: CUT domain [PF02376.17, score=229.5]; Homeodomain [PF00046.31, score=53.4]; Homeobox KN domain [PF05920.13, score=27.9]} {Human: ENSG00000257923, CUX1, cut like homeobox 1, [Score=191, Expect=6e-49]; ENSG00000111249, CUX2, cut like homeobox 2, [Score=187, Expect=1e-47]} {Mouse: ENSMUSG00000042589, Cux2, cut-like homeobox 2, [RH, Score=192, Expect=2e-49]} {Dmel: FBgn0004198, ct, cut, [RH, Score=145, Expect=1e-34]} {Celegans: WBGene00000464, ceh-44, Homeobox protein cut-like ceh-44, [RH, Score=147, Expect=1e-35]} {Smed: dd_Smed_v6_13843_0_1, dd_Smed_v6_13843_0_1, [RH, Score=131, Expect=7e-31]} {RNA1509_6534} {RNA1310_2215.2} {RNA815_1260}
5. MligTC455_53820 155 3.23 Mlig455_065353

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=1.766

 1.721 - - 0.764 - 0.957 - Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1}
6. MligTC455_47729 324 6.75 Mlig455_046078

Neo: -

Age: -

 DHX37 0.972 - - - - - 0.972 Mlig455_046078 {REF} {Length: 3257} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=74.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=49.6]; Helicase conserved C-terminal domain [PF00271.33, score=44.3]; DEAD/DEAH box helicase [PF00270.31, score=40.6]; AAA domain [PF13604.8, score=21.5]; AAA domain [PF13245.8, score=20.0]} {Human: ENSG00000150990, DHX37, DEAH-box helicase 37, [RH, Score=615, Expect=0.0]} {Mouse: ENSMUSG00000029480, Dhx37, DEAH (Asp-Glu-Ala-His) box polypeptide 37, [RH, Score=635, Expect=0.0]} {Dmel: FBgn0001330, kz, kurz, [RH, Score=649, Expect=0.0]} {Celegans: WBGene00015525, rha-2, Putative ATP-dependent RNA helicase rha-2, [RH, Score=556, Expect=3e-180]} {Smed: dd_Smed_v6_10340_0_1, dd_Smed_v6_10340_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_10043} {RNA1310_4392} {RNA815_1308.1}
7. MligTC455_32414 340 7.09 Mlig455_047786

Neo: -

Age: -

 0.971 - - 0.971 - - - Mlig455_047786 {REF} {Length: 411} {NoTransDecoderORF} {RNA1509_48685} {RNA1310_51404.2} {RNA815_8068}
8. MligTC455_08083 6 0.12 Mlig455_003708

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_003708 {REF} {Length: 532} {NoTransDecoderORF} {RNA1310_8013} {RNA815_43191}
9. MligTC455_43542 1136 23.66 Mlig455_059240

Neo: -

Age: -

 BLOC1S1 0.963 - - - - - 0.963 Mlig455_059240 {REF} {Length: 1424} {TRANSSPLICED} {Pfam: GCN5-like protein 1 (GCN5L1) [PF06320.15, score=142.5]} {Human: ENSG00000135441, BLOC1S1, biogenesis of lysosomal organelles complex 1 subunit 1, [RH, Score=145, Expect=3e-45]} {Mouse: ENSMUSG00000090247, Bloc1s1, biogenesis of lysosomal organelles complex-1, subunit 1, [RH, Score=143, Expect=5e-45]} {Dmel: FBgn0050077, Blos1, Biogenesis of lysosome-related organelles complex 1, subunit 1, [RH, Score=129, Expect=4e-39]} {Celegans: WBGene00011872, blos-1, Biogenesis of lysosome-related organelles complex 1 subunit 1, [RH, Score=119, Expect=1e-35]} {Smed: dd_Smed_v6_2531_0_1, dd_Smed_v6_2531_0_1, [RH, Score=117, Expect=4e-35]} {RNA1509_17025, RNA1509_31167, RNA1509_46458} {RNA1310_39421, RNA1509_31167, RNA1509_46458} {RNA1509_31167, RNA1509_46458, RNA815_32765}
10. MligTC455_25255 728 15.16 Mlig455_049890

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_049890 {REF} {Length: 1764} {TRANSSPLICED} {RNA1509_17288} {RNA1310_14898, RNA1509_17288} {RNA1509_17288, RNA815_12896}
11. MligTC455_49593 323 6.72 Mlig455_025219

Neo: -

Age: Up-Down-Up

Region-enriched R2: 3.432/0.00265
Region-enriched R6: 2.411/0.04695

 RRBP1 0.958 - - 0.958 - - - Mlig455_025219 {REF} {Length: 1413} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [RH, Score=62.8, Expect=2e-11]} {RNA1509_39523} {RNA1310_52655} {RNA815_22785}
12. MligTC455_35155 410 8.54 Mlig455_055910

Neo: -

Age: -

 MARCH1 0.957 - - - - - 0.957 Mlig455_055910 {REF} {Length: 2850} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=47.8]} {Human: ENSG00000145416, MARCH1, membrane associated ring-CH-type finger 1, [RH, Score=227, Expect=2e-69]; ENSG00000165406, MARCH8, membrane associated ring-CH-type finger 8, [RH, Score=217, Expect=5e-65]} {Mouse: ENSMUSG00000036469, March1, membrane-associated ring finger (C3HC4) 1, [RH, Score=226, Expect=5e-69]; ENSMUSG00000025702, March8, membrane-associated ring finger (C3HC4) 8, [RH, Score=220, Expect=9e-70]} {Dmel: FBgn0035983, CG4080, [Score=206, Expect=4e-61]} {Celegans: WBGene00013273, marc-5, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=68.9, Expect=9e-13]} {Smed: dd_Smed_v6_4997_0_1, dd_Smed_v6_4997_0_1, [RH, Score=251, Expect=8e-81]} {RNA1509_28382} {RNA1310_21336.1, RNA1509_28382} {RNA1509_28382, RNA815_12925}
13. MligTC455_45177 162 3.39 Mlig455_003115

Neo: -

Age: -

Region-enriched R2: 3.498/0.00968

 0.952 - - 0.952 - - - Mlig455_003115 {REF} {Length: 1689} {RNA1310_35114} {RNA815_16921}
14. MligTC455_18569 79 1.65 Mlig455_002173, Mlig455_002274, Mlig455_002318

Neo: -

Age: -

Region-enriched R4: 6.510/0.00058

 0.95 - - - - 0.950 -

Mlig455_002173 {REF} {Length: 1129} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}

Mlig455_002274 {REF} {Length: 1130} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}

Mlig455_002318 {REF} {Length: 1012} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}

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