Data search
Results for MligTC455_35089
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35089 | 36 | 0.75 | Mlig455_017906 | Neo: Int S/G2/M Age: Up-Down-Up Regeneration-upregulated R5: 6.095 Regeneration-enriched R5: 6.095 |
Mlig455_017906 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.3]; C2H2-type zinc finger [PF13894.8, score=49.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.1]; Zinc-finger of C2H2 type [PF12874.9, score=19.0]} {Mouse: ENSMUSG00000025602, Zfp202, zinc finger protein 202, [Score=53.1, Expect=4e-07]; ENSMUSG00000030380, Mzf1, myeloid zinc finger 1, [Score=50.8, Expect=2e-06]} {Dmel: FBgn0030240, CG2202, [Score=52.0, Expect=7e-07]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=53.9, Expect=1e-07]} {RNA1509_40803, RNA1509_53048} {RNA1310_18926, RNA1509_40803, RNA1509_53048} {RNA1509_40803, RNA1509_53048, RNA815_10511.1} |
Cumulative graph for MligTC455_35089
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.423 | 1.085 | 0.99994 | 1.00000 | |
| RegionR2 | 1.372 | 1.085 | 0.99993 | 1.00000 | |
| RegionR3 | -0.335 | 1.085 | 0.99994 | 1.00000 | |
| RegionR4 | -0.897 | 1.085 | 0.99983 | 1.00000 | |
| RegionR5 | -0.897 | 1.085 | 0.99986 | 1.00000 | |
| RegionR6 | -0.225 | 1.085 | 0.99997 | 1.00000 | |
| RegionR7 | 0.32 | 1.085 | 0.99995 | 1.00000 | |
| RegionR8 | 0.239 | 1.085 | 0.99994 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.272 | 1.085 | 0.99995 | 1.00000 | |
| RegenerationR2 | 4.133 | 1.085 | 0.00503 | 0.11105 | |
| RegenerationR3 | 6.747 | 1.085 | 0.00038 | 0.02748 | |
| RegenerationR4 | 6.292 | 1.085 | 0.00157 | 0.04789 | |
| RegenerationR5 | 6.095 | 1.085 | 0.00006 | 0.00918 | Specific for R5: 6.095 |
| RegenerationR6 | 5.944 | 1.085 | 0.00153 | 0.04362 | |
| RegenerationBL | 1.95 | 1.085 | 0.99995 | 1.00000 | |
| RegenerationTP | 0.918 | 1.085 | 0.99998 | 1.00000 |
Genes with expression patterns similar to MligTC455_35089
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35089 | 36 | 0.75 | Mlig455_017906 | Neo: Int S/G2/M Age: Up-Down-Up Regeneration-upregulated R5: 6.095 Regeneration-enriched R5: 6.095 |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_017906 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.3]; C2H2-type zinc finger [PF13894.8, score=49.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.1]; Zinc-finger of C2H2 type [PF12874.9, score=19.0]} {Mouse: ENSMUSG00000025602, Zfp202, zinc finger protein 202, [Score=53.1, Expect=4e-07]; ENSMUSG00000030380, Mzf1, myeloid zinc finger 1, [Score=50.8, Expect=2e-06]} {Dmel: FBgn0030240, CG2202, [Score=52.0, Expect=7e-07]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=53.9, Expect=1e-07]} {RNA1509_40803, RNA1509_53048} {RNA1310_18926, RNA1509_40803, RNA1509_53048} {RNA1509_40803, RNA1509_53048, RNA815_10511.1} | |
| 2. | MligTC455_21037 | 24 | 0.5 | Mlig455_040146 | Neo: - Age: logFC(26M/2M)=-0.461 |
NOTCH2 | 0.982 | - | - | - | - | 0.982 | - | Mlig455_040146 {REF} {Length: 4039} {Pfam: Calcium-binding EGF domain [PF07645.17, score=270.5]; EGF-like domain [PF00008.29, score=200.5]; Human growth factor-like EGF [PF12661.9, score=140.1]; EGF domain [PF12947.9, score=120.5]; Delta serrate ligand [PF01414.21, score=94.9]; EGF-like domain [PF07974.15, score=75.4]; Complement Clr-like EGF-like [PF12662.9, score=44.2]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=281, Expect=1e-77]; ENSG00000074181, NOTCH3, notch 3, [Score=279, Expect=4e-77]; ENSG00000235396, NOTCH4, notch 4, [Score=277, Expect=2e-76]; ENSG00000234876, NOTCH4, notch 4, [Score=275, Expect=9e-76]; ENSG00000204301, NOTCH4, notch 4, [Score=275, Expect=9e-76]; ENSG00000223355, NOTCH4, notch 4, [Score=275, Expect=8e-76]; ENSG00000206312, NOTCH4, notch 4, [Score=275, Expect=9e-76]; ENSG00000232339, NOTCH4, notch 4, [Score=275, Expect=8e-76]; ENSG00000148400, NOTCH1, notch 1, [Score=271, Expect=2e-74]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=285, Expect=3e-79]; ENSMUSG00000026923, Notch1, notch 1, [Score=272, Expect=7e-75]} {Dmel: FBgn0004647, N, Notch, [Score=283, Expect=2e-78]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=228, Expect=5e-61]} {Smed: dd_Smed_v6_13823_0_1, dd_Smed_v6_13823_0_1, [Score=229, Expect=4e-62]} {RNA1509_24587} {RNA1310_8063.1} {RNA815_2179.1} |
| 3. | MligTC455_28287 | 44 | 0.92 | Mlig455_008619 | Neo: - Age: Down-Down-Up |
0.978 | - | - | - | 0.978 | - | - | Mlig455_008619 {REF} {Length: 3624} {RNA1509_41463} {RNA1310_17510.1} {RNA815_6737} | |
| 4. | MligTC455_37609 | 27 | 0.55 | Mlig455_026308, Mlig455_026350 | Neo: - Age: - |
KCNH8 | 0.973 | - | - | - | 0.973 | - | - | Mlig455_026308 {REF} {Length: 3639} {Pfam: Ion transport protein [PF00520.33, score=101.8]; PAS domain [PF13426.9, score=61.2]; Ion channel [PF07885.18, score=45.1]; Cyclic nucleotide-binding domain [PF00027.31, score=32.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=26.1]; PAS fold [PF08447.14, score=20.6]; PAS fold [PF00989.27, score=19.7]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [Score=536, Expect=1e-172]; ENSG00000135519, KCNH3, potassium voltage-gated channel subfamily H member 3, [Score=521, Expect=8e-167]; ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=512, Expect=2e-164]} {Mouse: ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=514, Expect=2e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=4e-130]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=764, Expect=0.0]} {RNA1509_55158} {RNA1310_3235} {RNA815_4951.1} Mlig455_026350 {REF} {Length: 4084} {Pfam: Ion transport protein [PF00520.33, score=101.4]; PAS domain [PF13426.9, score=61.9]; Ion channel [PF07885.18, score=45.2]; Cyclic nucleotide-binding domain [PF00027.31, score=34.5]; PAS fold [PF08447.14, score=22.0]; PAS fold [PF00989.27, score=21.5]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [RH, Score=542, Expect=1e-174]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=540, Expect=4e-174]; ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=513, Expect=7e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=8e-131]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=767, Expect=0.0]} {RNA1509_55158} {RNA1310_3235, RNA1509_55158} {RNA1509_55158, RNA815_4951.1} |
| 5. | MligTC455_03672 | 27 | 0.57 | Mlig455_067166 | Neo: - Age: Up-Down-Up |
TRPM2 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_067166 {REF} {Length: 3486} {Pfam: SLOG in TRPM [PF18139.3, score=155.6]; SLOG in TRPM, prokaryote [PF18171.3, score=60.9]} {Human: ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=231, Expect=2e-62]} {Mouse: ENSMUSG00000009292, Trpm2, transient receptor potential cation channel, subfamily M, member 2, [Score=215, Expect=2e-57]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=175, Expect=1e-44]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=194, Expect=1e-50]} {Smed: dd_Smed_v6_17981_0_3, dd_Smed_v6_17981_0_3, [RH, Score=559, Expect=0.0]} {RNA1509_51848} {RNA1310_644} {RNA815_9231} |
| 6. | MligTC455_06778 | 5 | 0.1 | Mlig455_026111 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_026111 {REF} {Length: 693} {NoTransDecoderORF} {RNA1310_56921} {RNA815_29202} | |
| 7. | MligTC455_36304 | 67 | 1.41 | Mlig455_061160 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.529 Regeneration-upregulated R2: 5.724 Regeneration-enriched R2: 5.724 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_061160 {REF} {Length: 3684} {Pfam: Tenascin EGF domain [PF18720.3, score=25.7]; EGF-like domain [PF07974.15, score=21.9]} {RNA1509_3707} {RNA1310_2470} {RNA815_642.1} | |
| 8. | MligTC455_47002 | 25 | 0.53 | Mlig455_054968 | Neo: - Age: logFC(26M/2M)=0.489 Region-enriched R4: 7.313/0.01920 |
RPL4 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_054968 {REF} {Length: 1332} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=78.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=437, Expect=2e-152]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=437, Expect=7e-153]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=422, Expect=2e-147]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=395, Expect=2e-137]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=391, Expect=6e-136]} {RNA1509_548, RNA1509_58918} {RNA1310_26790, RNA1509_58918} {RNA1509_58918, RNA815_10660} |
| 9. | MligTC455_46263 | 67 | 1.39 | Mlig455_058665 | Neo: - Age: - |
SLC26A1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_058665 {REF} {Length: 1886} {Pfam: STAS domain [PF01740.23, score=89.4]; Sulfate permease family [PF00916.22, score=38.8]; STAS domain [PF13466.8, score=26.9]} {Human: ENSG00000145217, SLC26A1, solute carrier family 26 member 1, [Score=68.2, Expect=8e-12]} {Mouse: ENSMUSG00000020651, Slc26a4, solute carrier family 26, member 4, [Score=71.2, Expect=5e-13]} {Dmel: FBgn0036770, Prestin, [Score=72.4, Expect=2e-13]} {Celegans: WBGene00017464, sulp-2, Anion transporter SULP-2; SULfate Permease family, [Score=69.7, Expect=9e-13]} {Smed: dd_Smed_v6_10602_0_1, dd_Smed_v6_10602_0_1, [Score=71.6, Expect=1e-13]} {RNA1509_45237} {RNA1310_30910} {RNA815_30992} |
| 10. | MligTC455_52037 | 158 | 3.3 | Mlig455_004185 | Neo: - Age: - |
PIAS2 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_004185 {REF} {Length: 4387} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=65.3]; PINIT domain [PF14324.8, score=42.7]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=21.9]} {Human: ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [Score=93.2, Expect=4e-19]} {Mouse: ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [Score=105, Expect=3e-23]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=87.4, Expect=1e-17]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [Score=99.8, Expect=2e-21]} {RNA1509_24763, RNA1509_34035, RNA1509_42955} {RNA1310_5130, RNA1509_24763, RNA1509_34035} {RNA1509_24763, RNA1509_34035, RNA815_10497} |
| 11. | MligTC455_24534 | 14 | 0.29 | Mlig455_011965 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_011965 {REF} {Length: 1288} {NoTransDecoderORF} {RNA1509_28752} {RNA1310_137924} {RNA815_7756.1} |
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