Data search
Results for MligTC455_35178
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35178 | 1644 | 34.24 | Mlig455_030126, Mlig455_030191 | Neo: - Age: - |
RFX3 | Mlig455_030126 {REF} {Length: 4821} {Pfam: RFX DNA-binding domain [PF02257.17, score=114.6]} {Human: ENSG00000080298, RFX3, regulatory factor X3, [Score=553, Expect=0.0]; ENSG00000132005, RFX1, regulatory factor X1, [Score=528, Expect=3e-173]} {Mouse: ENSMUSG00000040929, Rfx3, regulatory factor X, 3 (influences HLA class II expression), [Score=566, Expect=0.0]} {Dmel: FBgn0020379, Rfx, [RH, Score=513, Expect=6e-169]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [RH, Score=373, Expect=2e-116]} {Smed: dd_Smed_v6_5636_0_1, dd_Smed_v6_5636_0_1, [RH, Score=552, Expect=0.0]} {RNA1509_14505} {RNA1310_2070.1, RNA1509_14505} {RNA1509_14505, RNA815_7519.1} Mlig455_030191 {REF} {Length: 3987} {TRANSSPLICED} {Pfam: RFX DNA-binding domain [PF02257.17, score=114.6]} {Human: ENSG00000080298, RFX3, regulatory factor X3, [Score=554, Expect=0.0]} {Mouse: ENSMUSG00000040929, Rfx3, regulatory factor X, 3 (influences HLA class II expression), [Score=566, Expect=0.0]} {Dmel: FBgn0020379, Rfx, [Score=511, Expect=2e-168]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [Score=373, Expect=2e-118]} {Smed: dd_Smed_v6_5636_0_1, dd_Smed_v6_5636_0_1, [RH, Score=552, Expect=0.0]} {RNA1509_14505, RNA1509_17242, RNA1509_31559, RNA1509_41210} {RNA1310_2558, RNA1509_17242, RNA1509_31559, RNA1509_41210} {RNA1509_17242, RNA1509_31559, RNA1509_41210, RNA815_12186} |
Cumulative graph for MligTC455_35178
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.001 | 5.303 | 0.34497 | 0.98864 | |
| RegionR2 | 0.29 | 5.303 | 0.53759 | 0.90679 | |
| RegionR3 | 0.191 | 5.303 | 0.61975 | 1.00000 | |
| RegionR4 | 1.054 | 5.303 | 0.02148 | 0.10740 | |
| RegionR5 | 0.687 | 5.303 | 0.05635 | 0.20405 | |
| RegionR6 | 0.514 | 5.303 | 0.17895 | 0.74221 | |
| RegionR7 | 0.441 | 5.303 | 0.31493 | 0.94964 | |
| RegionR8 | -2.175 | 5.303 | 0.00245 | 0.08476 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.805 | 5.303 | 0.12290 | 0.85205 | |
| RegenerationR2 | 1.17 | 5.303 | 0.00437 | 0.10190 | |
| RegenerationR3 | 0.147 | 5.303 | 0.74828 | 0.96403 | |
| RegenerationR4 | -0.18 | 5.303 | 0.70087 | 0.95403 | |
| RegenerationR5 | 0.131 | 5.303 | 0.76151 | 0.97597 | |
| RegenerationR6 | 0.376 | 5.303 | 0.39437 | 0.73335 | |
| RegenerationBL | 1.04 | 5.303 | 0.02845 | 0.18746 | |
| RegenerationTP | 1.533 | 5.303 | 0.00503 | 0.11897 |
Genes with expression patterns similar to MligTC455_35178
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35178 | 1644 | 34.24 | Mlig455_030126, Mlig455_030191 | Neo: - Age: - |
RFX3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030126 {REF} {Length: 4821} {Pfam: RFX DNA-binding domain [PF02257.17, score=114.6]} {Human: ENSG00000080298, RFX3, regulatory factor X3, [Score=553, Expect=0.0]; ENSG00000132005, RFX1, regulatory factor X1, [Score=528, Expect=3e-173]} {Mouse: ENSMUSG00000040929, Rfx3, regulatory factor X, 3 (influences HLA class II expression), [Score=566, Expect=0.0]} {Dmel: FBgn0020379, Rfx, [RH, Score=513, Expect=6e-169]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [RH, Score=373, Expect=2e-116]} {Smed: dd_Smed_v6_5636_0_1, dd_Smed_v6_5636_0_1, [RH, Score=552, Expect=0.0]} {RNA1509_14505} {RNA1310_2070.1, RNA1509_14505} {RNA1509_14505, RNA815_7519.1} Mlig455_030191 {REF} {Length: 3987} {TRANSSPLICED} {Pfam: RFX DNA-binding domain [PF02257.17, score=114.6]} {Human: ENSG00000080298, RFX3, regulatory factor X3, [Score=554, Expect=0.0]} {Mouse: ENSMUSG00000040929, Rfx3, regulatory factor X, 3 (influences HLA class II expression), [Score=566, Expect=0.0]} {Dmel: FBgn0020379, Rfx, [Score=511, Expect=2e-168]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [Score=373, Expect=2e-118]} {Smed: dd_Smed_v6_5636_0_1, dd_Smed_v6_5636_0_1, [RH, Score=552, Expect=0.0]} {RNA1509_14505, RNA1509_17242, RNA1509_31559, RNA1509_41210} {RNA1310_2558, RNA1509_17242, RNA1509_31559, RNA1509_41210} {RNA1509_17242, RNA1509_31559, RNA1509_41210, RNA815_12186} |
| 2. | MligTC455_41325 | 202 | 4.2 | Mlig455_025012 | Neo: - Age: Up-Down-Up |
CCDC151 | 1.66 | 0.710 | - | - | - | - | 0.950 | Mlig455_025012 {REF} {Length: 2382} {TRANSSPLICED} {Human: ENSG00000198003, CCDC151, coiled-coil domain containing 151, [Score=251, Expect=5e-75]} {Mouse: ENSMUSG00000039632, Ccdc151, coiled-coil domain containing 151, [Score=261, Expect=4e-79]} {Dmel: FBgn0036219, CCDC151, Coiled-coil domain containing protein 151, [Score=111, Expect=2e-25]} {Smed: dd_Smed_v6_4526_0_1, dd_Smed_v6_4526_0_1, [Score=463, Expect=3e-158]} {RNA1509_18758} {RNA1310_9513.1} {RNA815_24234} |
| 3. | MligTC455_29973 | 276 | 5.75 | Mlig455_010207 | Neo: - Age: logFC(26M/2M)=-0.329 |
0.971 | - | - | 0.971 | - | - | - | Mlig455_010207 {REF} {Length: 2077} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=31.0]} {RNA1509_25391} {RNA1310_13676} {RNA815_5395.1} | |
| 4. | MligTC455_17383 | 1327 | 27.64 | Mlig455_022114, Mlig455_053650 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_022114 {REF} {Length: 3990} {Pfam: Domain of Unknown Function (DUF1542) [PF07564.13, score=21.5]} {RNA1509_4411} {RNA1310_4537.1, RNA1509_4411} {RNA1509_4411, RNA815_1371} Mlig455_053650 {REF} {Length: 4005} {Pfam: Domain of Unknown Function (DUF1542) [PF07564.13, score=21.5]} {RNA1509_4411, RNA1509_52435} {RNA1310_4537.1, RNA1509_52435} {RNA1509_52435, RNA815_1371} |
|
| 5. | MligTC455_52917 | 35 | 0.74 | Mlig455_038643 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_038643 {REF} {Length: 4209} {NoTransDecoderORF} {RNA1509_49908} {RNA1310_28346} {RNA815_54494} | |
| 6. | MligTC455_37139 | 1583 | 32.98 | Mlig455_017144, Mlig455_019681 | Neo: - Age: - |
TRPM3 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_017144 {REF} {Length: 5140} {TRANSSPLICED} {Pfam: SLOG in TRPM [PF18139.3, score=159.9]; SLOG in TRPM, prokaryote [PF18171.3, score=53.1]; Ion transport protein [PF00520.33, score=37.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=358, Expect=3e-102]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=360, Expect=4e-103]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=335, Expect=1e-95]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=243, Expect=5e-65]} {Smed: dd_Smed_v6_9288_0_1, dd_Smed_v6_9288_0_1, [RH, Score=502, Expect=2e-155]} {RNA1509_6375} {RNA1310_1012, RNA1509_6375} {RNA1509_6375, RNA815_5496.1} Mlig455_019681 {REF} {Length: 5114} {TRANSSPLICED} {Pfam: SLOG in TRPM [PF18139.3, score=161.2]; SLOG in TRPM, prokaryote [PF18171.3, score=53.2]; Ion transport protein [PF00520.33, score=37.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=364, Expect=5e-103]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=363, Expect=1e-102]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=345, Expect=9e-97]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=239, Expect=1e-63]} {Smed: dd_Smed_v6_9288_0_1, dd_Smed_v6_9288_0_1, [RH, Score=508, Expect=1e-157]} {RNA1509_43040, RNA1509_6375} {RNA1310_1012, RNA1509_43040} {RNA1509_43040, RNA815_5496.1} |
| 7. | MligTC455_28543 | 223 | 4.64 | Mlig455_057913 | Neo: - Age: Down-Up-Down |
TTLL6 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_057913 {REF} {Length: 4159} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=268.0]} {Human: ENSG00000170703, TTLL6, tubulin tyrosine ligase like 6, [RH, Score=511, Expect=3e-167]} {Mouse: ENSMUSG00000045467, Ttll13, tubulin tyrosine ligase-like family, member 13, [Score=558, Expect=0.0]} {Dmel: FBgn0039501, CG5987, [RH, Score=453, Expect=2e-147]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=220, Expect=6e-61]} {Smed: dd_Smed_v6_8131_0_1, dd_Smed_v6_8131_0_1, [Score=669, Expect=0.0]} {RNA1509_19350} {RNA1310_5550.1} {RNA815_3974} |
| 8. | MligTC455_53842 | 1222 | 25.46 | Mlig455_023890 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.345 Region-enriched R2: 1.546/0.01667 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_023890 {REF} {Length: 1336} {RNA1509_15580} {RNA1310_22487.1} {RNA815_10676.1} | |
| 9. | MligTC455_22761 | 288 | 6.01 | Mlig455_005521 | Neo: - Age: - |
ELOVL4 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_005521 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: GNS1/SUR4 family [PF01151.20, score=138.3]} {Human: ENSG00000118402, ELOVL4, ELOVL fatty acid elongase 4, [Score=220, Expect=1e-70]} {Mouse: ENSMUSG00000032262, Elovl4, elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4, [Score=216, Expect=1e-69]} {Dmel: FBgn0052072, Elo68alpha, Elongase 68alpha, [Score=145, Expect=2e-42]} {Celegans: WBGene00001244, elo-6, Elongation of very long chain fatty acids protein 6, [Score=52.8, Expect=4e-08]} {Smed: dd_Smed_v6_7835_0_1, dd_Smed_v6_7835_0_1, [Score=215, Expect=7e-70]} {RNA1509_11261} {RNA1310_42181} {RNA815_6649.1} |
| 10. | MligTC455_22762 | 328 | 6.84 | Mlig455_036232 | Neo: - Age: logFC(26M/2M)=0.467 |
ELOVL4 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_036232 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: GNS1/SUR4 family [PF01151.20, score=205.6]} {Human: ENSG00000118402, ELOVL4, ELOVL fatty acid elongase 4, [RH, Score=308, Expect=2e-104]} {Mouse: ENSMUSG00000032262, Elovl4, elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4, [RH, Score=304, Expect=5e-103]} {Dmel: FBgn0052072, Elo68alpha, Elongase 68alpha, [RH, Score=214, Expect=2e-68]} {Celegans: WBGene00001245, elo-7, Elongation of very long chain fatty acids protein, [Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_7835_0_1, dd_Smed_v6_7835_0_1, [Score=308, Expect=2e-105]} {RNA1509_11261} {RNA1310_21427.1} {RNA815_6649.1} |
| 11. | MligTC455_32744 | 1369 | 28.53 | Mlig455_065420 | Neo: - Age: logFC(26M/2M)=0.351 |
KY | 0.952 | - | - | 0.952 | - | - | - | Mlig455_065420 {REF} {Length: 6701} {TRANSSPLICED} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=37.4]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=144, Expect=9e-35]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=149, Expect=2e-36]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=279, Expect=1e-78]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=242, Expect=3e-69]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_1987} {RNA1310_669, RNA1509_1987} {RNA1509_1987, RNA815_5918.1} |
| 12. | MligTC455_46394 | 8810 | 183.54 | Mlig455_054818, Mlig455_054826 | Neo: - Age: - Region-specific R2: 1.771 Region-enriched R2: 1.255/0.00038 |
PKD2 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_054818 {REF} {Length: 2992} {TRANSSPLICED} {Pfam: Polycystin cation channel [PF08016.14, score=487.7]; Ion transport protein [PF00520.33, score=93.3]; EF hand [PF00036.34, score=32.7]; Ferredoxin I 4Fe-4S cluster domain [PF18109.3, score=21.3]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [RH, Score=750, Expect=0.0]} {Mouse: ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [RH, Score=747, Expect=0.0]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=323, Expect=1e-96]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=380, Expect=6e-120]} {Smed: dd_Smed_v6_17348_0_3, dd_Smed_v6_17348_0_3, [Score=733, Expect=0.0]} {RNA1509_1615} {RNA1310_21296.2, RNA1509_1615} {RNA1509_1615, RNA815_3158.1} Mlig455_054826 {REF} {Length: 3118} {TRANSSPLICED} {Pfam: Polycystin cation channel [PF08016.14, score=487.7]; Ion transport protein [PF00520.33, score=93.4]; EF hand [PF00036.34, score=32.6]; Ferredoxin I 4Fe-4S cluster domain [PF18109.3, score=21.2]} {Human: ENSG00000118762, PKD2, polycystin 2, transient receptor potential cation channel, [RH, Score=754, Expect=0.0]} {Mouse: ENSMUSG00000034462, Pkd2, polycystic kidney disease 2, [RH, Score=751, Expect=0.0]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=323, Expect=2e-96]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=387, Expect=1e-122]} {Smed: dd_Smed_v6_13327_0_1, dd_Smed_v6_13327_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_13522} {RNA1310_21296.2} {RNA815_3158.1} |
| 13. | MligTC455_48986 | 511 | 10.64 | Mlig455_017301 | Neo: - Age: Down-Up-Down |
TRPM2 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_017301 {REF} {Length: 4476} {Pfam: SLOG in TRPM [PF18139.3, score=216.0]; SLOG in TRPM, prokaryote [PF18171.3, score=64.9]; Ion transport protein [PF00520.33, score=58.5]} {Human: ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=420, Expect=4e-123]} {Mouse: ENSMUSG00000009292, Trpm2, transient receptor potential cation channel, subfamily M, member 2, [Score=441, Expect=2e-130]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=293, Expect=2e-81]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=247, Expect=3e-66]} {Smed: dd_Smed_v6_13119_0_1, dd_Smed_v6_13119_0_1, [RH, Score=627, Expect=0.0]} {RNA1509_8528} {RNA1310_1728.1} {RNA815_888} |
| 14. | MligTC455_29452 | 881 | 18.34 | Mlig455_044747 | Neo: - Age: - |
LMNTD1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_044747 {REF} {Length: 9990} {tRNA: Phe(GAA), score=86.5} {Pfam: Intermediate filament protein [PF00038.23, score=53.6]; Lamin Tail Domain [PF00932.21, score=40.3]; Mechanosensitive ion channel porin domain [PF12795.9, score=20.9]} {Human: ENSG00000152936, LMNTD1, lamin tail domain containing 1, [RH, Score=146, Expect=3e-37]} {Mouse: ENSMUSG00000054966, Lmntd1, lamin tail domain containing 1, [RH, Score=140, Expect=3e-35]} {Dmel: FBgn0002525, Lam, Lamin, [Score=72.4, Expect=1e-12]} {Celegans: WBGene00002051, ifa-3, Intermediate filament protein ifa-3, [Score=62.8, Expect=8e-10]} {Smed: dd_Smed_v6_10248_0_1, dd_Smed_v6_10248_0_1, [Score=208, Expect=5e-56]} {RNA1509_20212} {RNA1310_1500.1} {RNA815_1147.1} |
| 15. | MligTC455_33086 | 335 | 6.97 | Mlig455_067414, Mlig455_069549 | Neo: - Age: Up-Down-Up Region-enriched R7: 2.760/0.00678 |
BRAF | 0.95 | - | - | - | - | 0.950 | - | Mlig455_067414 {REF} {Length: 2697} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.5]; Protein kinase domain [PF00069.27, score=54.0]; Kinase-like [PF14531.8, score=30.9]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=79.0, Expect=2e-16]; ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=77.4, Expect=8e-16]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=80.5, Expect=5e-17]; ENSMUSG00000002413, Braf, Braf transforming gene, [Score=79.0, Expect=1e-16]} {Dmel: FBgn0003079, Raf, Raf oncogene, [Score=79.3, Expect=8e-17]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=87.8, Expect=8e-20]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=190, Expect=1e-56]} {RNA1509_56455} {RNA1310_52842} {RNA815_31190} Mlig455_069549 {REF} {Length: 2704} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.5]; Protein kinase domain [PF00069.27, score=54.0]; Kinase-like [PF14531.8, score=30.9]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=79.0, Expect=2e-16]; ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=77.4, Expect=8e-16]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=80.5, Expect=5e-17]; ENSMUSG00000002413, Braf, Braf transforming gene, [Score=79.0, Expect=1e-16]} {Dmel: FBgn0003079, Raf, Raf oncogene, [Score=79.3, Expect=8e-17]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=87.8, Expect=8e-20]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=190, Expect=1e-56]} {RNA1509_56455} {RNA1310_12825} {RNA815_31190} |