TomoSeq data search

Data search

Results for MligTC455_31460

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31460	489	10.18	Mlig455_004816, Mlig455_004883, Mlig455_004897	Neo: - Age: -	ATF3, JUND	Mlig455_004816 {REF} {Length: 4915} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=48.5]; Basic region leucine zipper [PF07716.17, score=32.7]; bZIP Maf transcription factor [PF03131.19, score=19.6]} {Human: ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=58.5, Expect=6e-09]; ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0001297, kay, kayak, [Score=64.7, Expect=6e-11]} {RNA1509_17888} {RNA1310_24181, RNA1509_17888} {RNA1509_17888, RNA815_15830} Mlig455_004883 {REF} {Length: 4920} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=28.4]; Herpesvirus large structural phosphoprotein UL32 [PF06070.13, score=16.6]} {Dmel: FBgn0001297, kay, kayak, [Score=51.6, Expect=4e-07]} {RNA1509_22204} {RNA1310_24181, RNA1509_22204} {RNA1509_22204, RNA815_15830} Mlig455_004897 {REF} {Length: 2063} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=44.4]; Basic region leucine zipper [PF07716.17, score=29.7]} {Human: ENSG00000162772, ATF3, activating transcription factor 3, [RH, Score=53.1, Expect=4e-08]} {Mouse: ENSMUSG00000026628, Atf3, activating transcription factor 3, [RH, Score=50.1, Expect=8e-07]} {Dmel: FBgn0001297, kay, kayak, [RH, Score=63.5, Expect=1e-10]} {RNA1509_22204} {RNA1310_24181} {RNA815_15830}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31460

489

10.18

Mlig455_004816, Mlig455_004883, Mlig455_004897

Neo: -

Age: -

ATF3, JUND

Mlig455_004816 {REF} {Length: 4915} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=48.5]; Basic region leucine zipper [PF07716.17, score=32.7]; bZIP Maf transcription factor [PF03131.19, score=19.6]} {Human: ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=58.5, Expect=6e-09]; ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0001297, kay, kayak, [Score=64.7, Expect=6e-11]} {RNA1509_17888} {RNA1310_24181, RNA1509_17888} {RNA1509_17888, RNA815_15830}

Mlig455_004883 {REF} {Length: 4920} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=28.4]; Herpesvirus large structural phosphoprotein UL32 [PF06070.13, score=16.6]} {Dmel: FBgn0001297, kay, kayak, [Score=51.6, Expect=4e-07]} {RNA1509_22204} {RNA1310_24181, RNA1509_22204} {RNA1509_22204, RNA815_15830}

Mlig455_004897 {REF} {Length: 2063} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=44.4]; Basic region leucine zipper [PF07716.17, score=29.7]} {Human: ENSG00000162772, ATF3, activating transcription factor 3, [RH, Score=53.1, Expect=4e-08]} {Mouse: ENSMUSG00000026628, Atf3, activating transcription factor 3, [RH, Score=50.1, Expect=8e-07]} {Dmel: FBgn0001297, kay, kayak, [RH, Score=63.5, Expect=1e-10]} {RNA1509_22204} {RNA1310_24181} {RNA815_15830}

Cumulative graph for MligTC455_31460

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.569	3.633	0.65592	1.00000
RegionR2	-0.057	3.633	0.94087	1.00000
RegionR3	-0.558	3.633	0.32271	0.86077
RegionR4	-0.156	3.633	0.80283	1.00000
RegionR5	0.553	3.633	0.23610	0.54532
RegionR6	-0.355	3.633	0.52993	1.00000
RegionR7	-0.759	3.633	0.30369	0.93881
RegionR8	0.762	3.633	0.29407	0.92282

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.818	3.633	0.23805	0.96582
RegenerationR2	0.558	3.633	0.39622	0.81279
RegenerationR3	1.909	3.633	0.00600	0.13953
RegenerationR4	0.711	3.633	0.30521	0.74670
RegenerationR5	1.385	3.633	0.02667	0.27770
RegenerationR6	1.166	3.633	0.09566	0.38457
RegenerationBL	1.756	3.633	0.01044	0.10326
RegenerationTP	1.654	3.633	0.02669	0.27509

Genes with expression patterns similar to MligTC455_31460

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31460	489	10.18	Mlig455_004816, Mlig455_004883, Mlig455_004897	Neo: - Age: -	ATF3, JUND	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004816 {REF} {Length: 4915} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=48.5]; Basic region leucine zipper [PF07716.17, score=32.7]; bZIP Maf transcription factor [PF03131.19, score=19.6]} {Human: ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=58.5, Expect=6e-09]; ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0001297, kay, kayak, [Score=64.7, Expect=6e-11]} {RNA1509_17888} {RNA1310_24181, RNA1509_17888} {RNA1509_17888, RNA815_15830} Mlig455_004883 {REF} {Length: 4920} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=28.4]; Herpesvirus large structural phosphoprotein UL32 [PF06070.13, score=16.6]} {Dmel: FBgn0001297, kay, kayak, [Score=51.6, Expect=4e-07]} {RNA1509_22204} {RNA1310_24181, RNA1509_22204} {RNA1509_22204, RNA815_15830} Mlig455_004897 {REF} {Length: 2063} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=44.4]; Basic region leucine zipper [PF07716.17, score=29.7]} {Human: ENSG00000162772, ATF3, activating transcription factor 3, [RH, Score=53.1, Expect=4e-08]} {Mouse: ENSMUSG00000026628, Atf3, activating transcription factor 3, [RH, Score=50.1, Expect=8e-07]} {Dmel: FBgn0001297, kay, kayak, [RH, Score=63.5, Expect=1e-10]} {RNA1509_22204} {RNA1310_24181} {RNA815_15830}
2.	MligTC455_19240	30	0.62	Mlig455_002447	Neo: - Age: Down-Up-Down Region-enriched R4: 5.385/0.01112		0.98	-	-	0.980	-	-	-	Mlig455_002447 {REF} {Length: 792} {TRANSSPLICED} {RNA1509_27449} {RNA1310_40611} {RNA815_20228}
3.	MligTC455_27341	260	5.42	Mlig455_016124	Neo: - Age: Up-Down-Up Region-enriched R2: 3.072/0.00434 Region-enriched R5: 2.037/0.00073	PRDM9	0.978	-	-	0.978	-	-	-	Mlig455_016124 {REF} {Length: 4648} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=34.3]; Zinc finger, C2H2 type [PF00096.28, score=26.0]; C2H2-type zinc finger [PF13912.8, score=25.3]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]} {Human: ENSG00000164256, PRDM9, PR/SET domain 9, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=54.3, Expect=2e-07]} {Dmel: FBgn0029697, CG15570, [Score=61.6, Expect=8e-10]} {RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208} {RNA1310_27790.1, RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208} {RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208, RNA815_25328}
4.	MligTC455_25941	28	0.59	Mlig455_022342	Neo: - Age: -		0.975	-	-	0.975	-	-	-	Mlig455_022342 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_23482} {RNA815_49293}
5.	MligTC455_19005	27	0.55	Mlig455_033827	Neo: - Age: - Region-enriched R4: 6.306/0.00129 Region-enriched R5: 3.009/0.01229		0.97	-	-	0.970	-	-	-	Mlig455_033827 {REF} {Length: 647} {NoTransDecoderORF} {RNA1310_41003.1} {RNA815_28385}
6.	MligTC455_35380	31	0.64	Mlig455_066533	Neo: - Age: -		0.96	-	-	0.960	-	-	-	Mlig455_066533 {REF} {Length: 2577} {RNA1509_47429} {RNA1310_16224} {RNA815_17701}
7.	MligTC455_10385	39	0.81	Mlig455_010659	Neo: - Age: -		0.959	-	-	0.959	-	-	-	Mlig455_010659 {REF} {Length: 504} {NoTransDecoderORF} {RNA1310_129868}
8.	MligTC455_43392	90	1.88	Mlig455_055609	Neo: - Age: - Region-enriched R4: 3.592/0.03736		0.959	-	-	0.959	-	-	-	Mlig455_055609 {REF} {Length: 3000} {TRANSSPLICED} {Mouse: ENSMUSG00000002343, Armc6, armadillo repeat containing 6, [RH, Score=120, Expect=3e-29]} {Dmel: FBgn0034315, CG5721, [RH, Score=113, Expect=7e-27]} {Smed: dd_Smed_v6_1357_0_1, dd_Smed_v6_1357_0_1, [RH, Score=147, Expect=8e-39]} {RNA1509_31191} {RNA1310_17098.1} {RNA815_7466}
9.	MligTC455_56264	21	0.44	Mlig455_057708	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_057708 {REF} {Length: 755} {RNA1509_18097} {RNA1310_18939} {RNA815_5467.1}
10.	MligTC455_19095	82	1.72	Mlig455_034497	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_034497 {REF} {Length: 828} {NoTransDecoderORF}
11.	MligTC455_40465	165	3.45	Mlig455_012477	Neo: Irradiation Age: -	INTS6	0.952	-	-	0.952	-	-	-	Mlig455_012477 {REF} {Length: 4658} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13519.8, score=61.6]} {Human: ENSG00000102786, INTS6, integrator complex subunit 6, [RH, Score=599, Expect=0.0]; ENSG00000165359, INTS6L, integrator complex subunit 6 like, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000035161, Ints6, integrator complex subunit 6, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0261383, IntS6, Integrator 6, [RH, Score=457, Expect=7e-143]} {Celegans: WBGene00000994, dic-1, DICE1 (Deleted In Cancer) homolog, [RH, Score=215, Expect=4e-58]} {Smed: dd_Smed_v6_11019_0_1, dd_Smed_v6_11019_0_1, [RH, Score=476, Expect=3e-155]} {RNA1509_16366} {RNA1310_4525} {RNA815_19797}
12.	MligTC455_39857	27	0.55	Mlig455_037127	Neo: - Age: Down-Down-Down	NECAB1	0.951	-	-	0.951	-	-	-	Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367}