M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_35918

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35918 88 1.84 Mlig455_014115, Mlig455_017871

Neo: -

Age: -

Mlig455_014115 {REF} {Length: 495} {NoTransDecoderORF} {RNA1509_55603} {RNA1310_2284.3} {RNA815_7655.1}

Mlig455_017871 {REF} {Length: 2843} {RNA1509_6226} {RNA1310_15973} {RNA815_15474}

Cumulative graph for MligTC455_35918

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.979 1.681 0.42583 1.00000
RegionR2 -2.408 1.681 0.10050 0.38979
RegionR3 -0.29 1.681 0.78956 1.00000
RegionR4 -1.243 1.681 0.44857 0.77762
RegionR5 -1.221 1.681 0.26678 0.59017
RegionR6 -0.669 1.681 0.54444 1.00000
RegionR7 1.454 1.681 0.22445 0.84576
RegionR8 1.399 1.681 0.35347 0.98708

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.572 1.681 0.32505 1.00000
RegenerationR2 1.65 1.681 0.11305 0.52449
RegenerationR3 -0.792 1.681 0.46930 0.84336
RegenerationR4 2.051 1.681 0.14009 0.56176
RegenerationR5 0.058 1.681 0.99501 1.00000
RegenerationR6 0.073 1.681 0.97714 1.00000
RegenerationBL -0.445 1.681 0.74439 1.00000
RegenerationTP -3.287 1.681 0.04006 0.33316


Genes with expression patterns similar to MligTC455_35918

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35918 88 1.84 Mlig455_014115, Mlig455_017871

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000

Mlig455_014115 {REF} {Length: 495} {NoTransDecoderORF} {RNA1509_55603} {RNA1310_2284.3} {RNA815_7655.1}

Mlig455_017871 {REF} {Length: 2843} {RNA1509_6226} {RNA1310_15973} {RNA815_15474}
2. MligTC455_37301 189 3.93 Mlig455_045354

Neo: -

Age: logFC(26M/2M)=-0.332

Region-enriched R4: 2.328/0.04450

 ERBB4 1.791 - - 0.839 - - 0.952 Mlig455_045354 {REF} {Length: 7327} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=295.2]; Protein kinase domain [PF00069.27, score=137.7]; Receptor L domain [PF01030.26, score=52.9]; Furin-like cysteine rich region [PF00757.22, score=50.3]; Growth factor receptor domain IV [PF14843.8, score=48.4]} {Human: ENSG00000178568, ERBB4, erb-b2 receptor tyrosine kinase 4, [RH, Score=362, Expect=1e-103]; ENSG00000146648, EGFR, epidermal growth factor receptor, [RH, Score=352, Expect=1e-100]} {Mouse: ENSMUSG00000020122, Egfr, epidermal growth factor receptor, [RH, Score=360, Expect=3e-103]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [RH, Score=509, Expect=3e-155]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [RH, Score=407, Expect=3e-119]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [RH, Score=504, Expect=6e-153]} {RNA1509_42246, RNA1509_47521, RNA1509_55812} {RNA1310_674, RNA1509_47521, RNA1509_55812} {RNA1509_47521, RNA1509_55812, RNA815_2089}
3. MligTC455_15828 52 1.09 Mlig455_069315

Neo: -

Age: Down-Up-Down

 NOG 1.72 - - 0.961 - - 0.759 Mlig455_069315 {REF} {Length: 2237} {Pfam: Noggin [PF05806.14, score=105.4]} {Human: ENSG00000183691, NOG, noggin, [RH, Score=87.8, Expect=3e-20]} {Mouse: ENSMUSG00000048616, Nog, noggin, [RH, Score=87.8, Expect=2e-20]} {Smed: dd_Smed_v6_15423_0_1, dd_Smed_v6_15423_0_1, [RH, Score=119, Expect=1e-32]} {RNA1310_31637} {RNA815_28948}
4. MligTC455_34853 23 0.47 Mlig455_045034

Neo: -

Age: -

 1.681 - - 0.981 - 0.700 - Mlig455_045034 {REF} {Length: 2444} {RNA1310_85929} {RNA815_43650}
5. MligTC455_43840 32 0.67 Mlig455_027957

Neo: -

Age: -

 SYT9 1.669 - - 0.963 - 0.706 - Mlig455_027957 {REF} {Length: 2429} {Pfam: C2 domain [PF00168.32, score=117.2]} {Human: ENSG00000170743, SYT9, synaptotagmin 9, [Score=194, Expect=6e-56]} {Mouse: ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=193, Expect=1e-55]} {Dmel: FBgn0261090, Sytbeta, Synaptotagmin beta, [RH, Score=188, Expect=6e-53]} {Celegans: WBGene00004923, snt-3, SyNapTotagmin, [Score=152, Expect=1e-42]} {Smed: dd_Smed_v6_19328_0_1, dd_Smed_v6_19328_0_1, [RH, Score=164, Expect=2e-45]} {RNA1509_57021} {RNA1310_11363} {RNA815_14366}
6. MligTC455_46342 108 2.26 Mlig455_039918, Mlig455_041226

Neo: -

Age: -

 1.665 - - 0.962 - - 0.703

Mlig455_039918 {REF} {Length: 1089} {NoTransDecoderORF} {RNA1310_80517}

Mlig455_041226 {REF} {Length: 755} {NoTransDecoderORF} {RNA1310_80517}
7. MligTC455_25374 428 8.91 Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

Regeneration-upregulated BL: 5.459

Regeneration-enriched BL: 5.459

 0.991 - - 0.991 - - -

Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463}

Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}
8. MligTC455_10991 207 4.31 Mlig455_011837, Mlig455_013118

Neo: Irradiation

Age: Down-Up-Down

 EGR4 0.989 - - 0.989 - - -

Mlig455_011837 {REF} {Length: 1687} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.2]; Zinc-finger double domain [PF13465.8, score=47.8]; C2H2-type zinc finger [PF13894.8, score=41.0]; C2H2-type zinc-finger domain [PF13909.8, score=23.2]} {Human: ENSG00000135625, EGR4, early growth response 4, [Score=107, Expect=3e-24]; ENSG00000179388, EGR3, early growth response 3, [Score=103, Expect=6e-24]; ENSG00000120738, EGR1, early growth response 1, [Score=102, Expect=6e-23]} {Mouse: ENSMUSG00000071341, Egr4, early growth response 4, [Score=107, Expect=9e-25]; ENSMUSG00000033730, Egr3, early growth response 3, [Score=103, Expect=6e-24]; ENSMUSG00000038418, Egr1, early growth response 1, [Score=102, Expect=4e-23]} {Dmel: FBgn0013469, klu, klumpfuss, [RH, Score=130, Expect=2e-32]} {Celegans: WBGene00013970, klu-1, KLUmpfuss related, [RH, Score=133, Expect=8e-34]} {Smed: dd_Smed_v6_16277_0_1, dd_Smed_v6_16277_0_1, [Score=137, Expect=1e-36]} {RNA1509_38897} {RNA1310_16481} {RNA815_46371}

Mlig455_013118 {REF} {Length: 1946} {RNA1509_38897} {RNA1310_16481, RNA1509_38897} {RNA1509_38897, RNA815_46371}
9. MligTC455_16825 83 1.73 Mlig455_004646, Mlig455_014982, Mlig455_033046, Mlig455_067354, Mlig455_070980

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.629/0.04385

 0.983 - - 0.983 - - -

Mlig455_004646 {REF} {Length: 513} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_014982 {REF} {Length: 176} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_033046 {REF} {Length: 514} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_067354 {REF} {Length: 520} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_070980 {REF} {Length: 3436} {RNA1509_26883} {RNA1310_785} {RNA815_2080}
10. MligTC455_01710 41 0.85 Mlig455_013827

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_013827 {REF} {Length: 2546} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.2]} {RNA1310_100507} {RNA815_49026}
11. MligTC455_17533 156 3.25 Mlig455_018291

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_018291 {REF} {Length: 1866} {TRANSSPLICED} {RNA1509_48476} {RNA1310_24654.1} {RNA815_19410}
12. MligTC455_38652 14 0.28 Mlig455_053085

Neo: -

Age: logFC(26M/2M)=3.457

 0.981 - - 0.981 - - - Mlig455_053085 {REF} {Length: 1326} {RNA1310_36111} {RNA815_20767}
13. MligTC455_26427 15 0.31 Mlig455_054140

Neo: -

Age: logFC(26M/2M)=-1.151

 TRPM1 0.98 - - 0.980 - - - Mlig455_054140 {REF} {Length: 5171} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=79.8]; Ankyrin repeats (3 copies) [PF12796.9, score=77.6]; Ankyrin repeats (many copies) [PF13857.8, score=40.4]; Ankyrin repeat [PF00023.32, score=38.8]; Ankyrin repeat [PF13606.8, score=38.6]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=57.0, Expect=3e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=57.8, Expect=1e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=56.6, Expect=3e-07]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=57.0, Expect=1e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=61.2, Expect=6e-09]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=3e-19]} {RNA1509_29189} {RNA1310_1181, RNA1509_29189} {RNA1509_29189, RNA815_1111.1}
14. MligTC455_12246 99 2.06 Mlig455_019154

Neo: -

Age: Down-Up-Down

 0.976 - - 0.976 - - - Mlig455_019154 {REF} {Length: 1143} {TRANSSPLICED} {RNA1509_36850, RNA1509_7400} {RNA1310_49234, RNA1509_36850} {RNA1509_36850, RNA815_19043.1}
15. MligTC455_35409 2095 43.64 Mlig455_004509

Neo: -

Age: -

 PPP3CA 0.976 - - 0.976 - - - Mlig455_004509 {REF} {Length: 4292} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=129.1]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3 catalytic subunit alpha, [RH, Score=837, Expect=0.0]; ENSG00000107758, PPP3CB, protein phosphatase 3 catalytic subunit beta, [RH, Score=823, Expect=0.0]; ENSG00000120910, PPP3CC, protein phosphatase 3 catalytic subunit gamma, [RH, Score=800, Expect=0.0]} {Mouse: ENSMUSG00000028161, Ppp3ca, protein phosphatase 3, catalytic subunit, alpha isoform, [RH, Score=840, Expect=0.0]; ENSMUSG00000021816, Ppp3cb, protein phosphatase 3, catalytic subunit, beta isoform, [RH, Score=823, Expect=0.0]} {Dmel: FBgn0011826, Pp2B-14D, Protein phosphatase 2B at 14D, [RH, Score=846, Expect=0.0]} {Celegans: WBGene00006527, tax-6, Serine/threonine-protein phosphatase 2B catalytic subunit, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_2045_0_1, dd_Smed_v6_2045_0_1, [RH, Score=674, Expect=0.0]} {RNA1509_25279, RNA1509_42566, RNA1509_9529} {RNA1310_10900, RNA1509_25279, RNA1509_42566, RNA1509_9529} {RNA1509_25279, RNA1509_42566, RNA1509_9529, RNA815_6996}
16. MligTC455_14925 43 0.9 Mlig455_031910

Neo: -

Age: -

 0.971 - - 0.971 - - - Mlig455_031910 {REF} {Length: 672} {RNA1310_118829}
17. MligTC455_27773 237 4.93 Mlig455_051946

Neo: -

Age: Down-Up-Down

 API5 0.97 - - 0.970 - - - Mlig455_051946 {REF} {Length: 2741} {Pfam: Apoptosis inhibitory protein 5 (API5) [PF05918.13, score=253.6]} {Human: ENSG00000166181, API5, apoptosis inhibitor 5, [Score=213, Expect=2e-61]} {Mouse: ENSMUSG00000027193, Api5, apoptosis inhibitor 5, [Score=215, Expect=1e-62]} {Dmel: FBgn0027885, Aac11, [Score=177, Expect=3e-48]} {Smed: dd_Smed_v6_2384_0_1, dd_Smed_v6_2384_0_1, [Score=78.6, Expect=2e-15]} {RNA1509_35278} {RNA1310_7287, RNA1509_35278} {RNA1509_35278, RNA815_3751.1}
18. MligTC455_28778 61 1.26 Mlig455_054196

Neo: -

Age: -

 ANKRD50 0.97 - - 0.970 - - - Mlig455_054196 {REF} {Length: 8618} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=74.9]; Ankyrin repeats (many copies) [PF13637.8, score=56.2]; Ankyrin repeats (many copies) [PF13857.8, score=49.7]; Ankyrin repeat [PF13606.8, score=46.0]; Ankyrin repeat [PF00023.32, score=41.1]; Mab-21 protein [PF03281.16, score=39.8]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=82.4, Expect=3e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=83.6, Expect=8e-16]} {Dmel: FBgn0039590, CG10011, [Score=69.7, Expect=1e-11]} {Celegans: WBGene00012124, T28D6.4, [Score=62.4, Expect=1e-09]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=85.1, Expect=1e-16]} {RNA1509_27730} {RNA1310_4352} {RNA815_2426.1}
19. MligTC455_03600 172 3.59 Mlig455_031645

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.335

 NIT2 0.967 - - 0.967 - - - Mlig455_031645 {REF} {Length: 967} {TRANSSPLICED} {Pfam: Carbon-nitrogen hydrolase [PF00795.24, score=210.9]} {Human: ENSG00000114021, NIT2, nitrilase family member 2, [RH, Score=306, Expect=2e-104]} {Mouse: ENSMUSG00000022751, Nit2, nitrilase family, member 2, [RH, Score=308, Expect=4e-105]} {Dmel: FBgn0037687, CG8132, [RH, Score=271, Expect=8e-91]} {Celegans: WBGene00003594, nft-1, Nitrilase and fragile histidine triad fusion protein NitFhit Bis(5'-adenosyl)-triphosphatase Nitrilase homolog, [Score=156, Expect=2e-44]} {Smed: dd_Smed_v6_1734_0_1, dd_Smed_v6_1734_0_1, [RH, Score=263, Expect=7e-88]} {RNA1509_7842} {RNA1310_13706.2, RNA1509_7842} {RNA1509_7842, RNA815_18016}
20. MligTC455_11439 36 0.76 Mlig455_030893

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_030893 {REF} {Length: 845} {RNA1509_54643} {RNA1310_17365} {RNA815_7880}
21. MligTC455_11632 18 0.38 Mlig455_064774

Neo: -

Age: -

 CFAP126 0.966 - - 0.966 - - - Mlig455_064774 {REF} {Length: 2533} {Human: ENSG00000188931, CFAP126, cilia and flagella associated protein 126, [Score=59.7, Expect=5e-10]} {Mouse: ENSMUSG00000026649, Cfap126, cilia and flagella associated protein 126, [Score=63.2, Expect=3e-11]} {RNA1310_44557.2} {RNA815_31853}
22. MligTC455_13557 20 0.43 Mlig455_020342, Mlig455_041283

Neo: -

Age: -

 ASIC1 0.966 - - 0.966 - - -

Mlig455_020342 {REF} {Length: 4002} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=135.3]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=59.3, Expect=4e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_33503} {RNA1310_41267.1} {RNA815_38083}

Mlig455_041283 {REF} {Length: 3377} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=207.2]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=4e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=60.1, Expect=7e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=66.2, Expect=5e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=112, Expect=8e-26]} {RNA1509_33503} {RNA1310_18874} {RNA815_38083}
23. MligTC455_32693 41 0.86 Mlig455_057534

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_057534 {REF} {Length: 1398} {Pfam: Integrase zinc binding domain [PF17921.3, score=24.5]} {RNA1509_13138} {RNA1310_14959.1} {RNA815_9852.1}
24. MligTC455_51254 45 0.94 Mlig455_062218

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_062218 {REF} {Length: 1157} {NoTransDecoderORF}
25. MligTC455_24335 62 1.29 Mlig455_006542

Neo: -

Age: -

 0.963 - - 0.963 - - - Mlig455_006542 {REF} {Length: 3028} {NoTransDecoderORF} {RNA1310_45624}
26. MligTC455_39849 441 9.2 Mlig455_049662, Mlig455_052830

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 2.291

 NUB1 0.962 - - - - 0.962 -

Mlig455_049662 {REF} {Length: 2609} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=46.4]; Ubiquitin-like domain [PF18037.3, score=31.6]; Ubiquitin family [PF00240.25, score=20.1]} {Human: ENSG00000013374, NUB1, negative regulator of ubiquitin like proteins 1, [RH, Score=186, Expect=4e-50]} {Mouse: ENSMUSG00000028954, Nub1, negative regulator of ubiquitin-like proteins 1, [RH, Score=181, Expect=2e-48]} {Dmel: FBgn0039343, CG5111, [RH, Score=257, Expect=2e-76]} {Smed: dd_Smed_v6_3402_0_1, dd_Smed_v6_3402_0_1, [RH, Score=169, Expect=6e-45]} {RNA1509_17867, RNA1509_35085} {RNA1310_7816.2, RNA1509_35085} {RNA1509_35085, RNA815_3803}

Mlig455_052830 {REF} {Length: 3051} {Pfam: Ubiquitin-like domain [PF18037.3, score=32.3]; Ubiquitin family [PF00240.25, score=21.0]} {Human: ENSG00000013374, NUB1, negative regulator of ubiquitin like proteins 1, [Score=162, Expect=2e-43]} {Mouse: ENSMUSG00000028954, Nub1, negative regulator of ubiquitin-like proteins 1, [Score=150, Expect=2e-39]} {Dmel: FBgn0039343, CG5111, [Score=182, Expect=5e-51]} {Smed: dd_Smed_v6_3402_0_1, dd_Smed_v6_3402_0_1, [RH, Score=147, Expect=6e-39]} {RNA1509_17867, RNA1509_34998} {RNA1310_7816.2, RNA1509_34998} {RNA1509_34998, RNA815_3803}
27. MligTC455_19612 108 2.24 Mlig455_029380

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_029380 {REF} {Length: 1693} {RNA1310_39700} {RNA815_31270}
28. MligTC455_06714 20 0.41 Mlig455_058305

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_058305 {REF} {Length: 391} {NoTransDecoderORF}
29. MligTC455_09957 222 4.63 Mlig455_013085

Neo: -

Age: -

Region-enriched R3: 2.181/0.04013

 SLC5A8 0.957 - - 0.957 - - - Mlig455_013085 {REF} {Length: 3769} {Pfam: Sodium:solute symporter family [PF00474.19, score=121.3]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=318, Expect=1e-99]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=318, Expect=1e-99]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=319, Expect=5e-100]} {Dmel: FBgn0034494, CG10444, [Score=280, Expect=1e-85]} {Celegans: WBGene00014092, ZK822.5, [Score=217, Expect=2e-62]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=257, Expect=2e-77]} {RNA1509_54739} {RNA1310_11168, RNA1509_54739} {RNA1509_54739, RNA815_11120.1}
30. MligTC455_12100 95 1.97 Mlig455_029365

Neo: -

Age: Down-Up-Down

Region-enriched R3: 3.875/0.00267

 0.957 - - 0.957 - - - Mlig455_029365 {REF} {Length: 1265} {RNA1509_49846} {RNA1310_39189, RNA1509_49846} {RNA1509_49846, RNA815_32261}
31. MligTC455_16575 52 1.07 Mlig455_005832

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_005832 {REF} {Length: 1785} {TRANSSPLICED} {RNA1509_56064} {RNA1310_27244} {RNA815_26294}
32. MligTC455_35684 154 3.21 Mlig455_038829, Mlig455_038837, Mlig455_038838, Mlig455_038917

Neo: -

Age: Down-Down-Up

 0.957 - - 0.957 - - -

Mlig455_038829 {REF} {Length: 2614} {TRANSSPLICED} {RNA1509_23775} {RNA1310_13318} {RNA815_5748.1}

Mlig455_038837 {REF} {Length: 2042} {TRANSSPLICED} {RNA1509_23775} {RNA1310_13318} {RNA815_5748.1}

Mlig455_038838 {REF} {Length: 2563} {RNA1509_23775} {RNA1310_6695.1} {RNA815_5748.1}

Mlig455_038917 {REF} {Length: 2375} {TRANSSPLICED} {RNA1509_23775} {RNA1310_6695.2} {RNA815_5748.1}
33. MligTC455_43665 34 0.71 Mlig455_039635

Neo: -

Age: logFC(26M/2M)=0.552

 WDR38 0.953 - - 0.953 - - - Mlig455_039635 {REF} {Length: 8946} {Pfam: WD domain, G-beta repeat [PF00400.34, score=39.6]} {Human: ENSG00000136918, WDR38, WD repeat domain 38, [Score=50.4, Expect=3e-06]} {Smed: dd_Smed_v6_8615_0_1, dd_Smed_v6_8615_0_1, [Score=298, Expect=9e-97]} {RNA1310_44404} {RNA815_33681}
34. MligTC455_22834 767 15.98 Mlig455_003372, Mlig455_012791, Mlig455_031654, Mlig455_031907, Mlig455_043709, Mlig455_054104

Neo: -

Age: -

Region-enriched R8: 1.637/0.02042
Region-enriched R4: 1.591/0.00837

 SLC13A3 0.952 - - - 0.952 - -

Mlig455_003372 {REF} {Length: 778} {TRANSSPLICED} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Mlig455_012791 {REF} {Length: 3446} {TRANSSPLICED} {Pfam: SOSS complex subunit C [PF15925.7, score=37.2]} {Dmel: FBgn0259720, CG42374, [RH, Score=41.6, Expect=8e-06]} {RNA1509_13897} {RNA1310_16789} {RNA815_18436}

Mlig455_031654 {REF} {Length: 1005} {TRANSSPLICED} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Mlig455_031907 {REF} {Length: 5013} {Pfam: Sodium:sulfate symporter transmembrane region [PF00939.21, score=178.2]; Citrate transporter [PF03600.18, score=53.7]} {Human: ENSG00000158296, SLC13A3, solute carrier family 13 member 3, [Score=268, Expect=4e-83]} {Mouse: ENSMUSG00000018459, Slc13a3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3, [Score=252, Expect=3e-77]} {Dmel: FBgn0036816, Indy, I'm not dead yet, [Score=204, Expect=1e-59]} {Celegans: WBGene00003517, nac-1, Sodium-dependent low-affinity dicarboxylate transporter 1, [Score=215, Expect=8e-64]} {Smed: dd_Smed_v6_12964_0_2, dd_Smed_v6_12964_0_2, [RH, Score=237, Expect=4e-74]} {RNA1509_47535} {RNA1310_11790} {RNA815_11593}

Mlig455_043709 {REF} {Length: 462} {NoTransDecoderORF} {RNA1509_57421} {RNA1310_25119} {RNA815_11593}

Mlig455_054104 {REF} {Length: 999} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}
35. MligTC455_39001 28 0.57 Mlig455_027878

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_027878 {REF} {Length: 1017} {NoTransDecoderORF} {RNA1509_13203} {RNA1310_24973} {RNA815_7432}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA