Data search
Results for MligTC455_35950
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35950 | 262 | 5.45 | Mlig455_010995 | Neo: Int S/G2/M Age: - |
SMC3 | Mlig455_010995 {REF} {Length: 4761} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=217.4]; SMC proteins Flexible Hinge Domain [PF06470.15, score=80.0]; AAA domain [PF13476.8, score=66.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=33.7]; AAA ATPase domain [PF13175.8, score=29.2]} {Human: ENSG00000108055, SMC3, structural maintenance of chromosomes 3, [RH, Score=1218, Expect=0.0]} {Mouse: ENSMUSG00000024974, Smc3, structural maintenance of chromosomes 3, [RH, Score=1220, Expect=0.0]} {Dmel: FBgn0015615, SMC3, Structural maintenance of chromosomes 3, [RH, Score=1104, Expect=0.0]} {Celegans: WBGene00004873, smc-3, Structural maintenance of chromosomes protein 3, [RH, Score=819, Expect=0.0]} {Smed: dd_Smed_v6_3809_0_1, dd_Smed_v6_3809_0_1, [RH, Score=1481, Expect=0.0]} {RNA1509_2545, RNA1509_41345, RNA1509_43062} {RNA1310_2315.1, RNA1509_41345, RNA1509_43062} {RNA1509_41345, RNA1509_43062, RNA815_671} |
Cumulative graph for MligTC455_35950
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.144 | 2.824 | 0.43860 | 1.00000 | |
| RegionR2 | -0.291 | 2.824 | 0.63173 | 0.97233 | |
| RegionR3 | -0.179 | 2.824 | 0.69986 | 1.00000 | |
| RegionR4 | 0.631 | 2.824 | 0.28287 | 0.59128 | |
| RegionR5 | -0.496 | 2.824 | 0.26479 | 0.58754 | |
| RegionR6 | -0.373 | 2.824 | 0.45472 | 1.00000 | |
| RegionR7 | 0.185 | 2.824 | 0.77404 | 1.00000 | |
| RegionR8 | -0.622 | 2.824 | 0.46999 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.07 | 2.824 | 0.21252 | 0.95120 | |
| RegenerationR2 | 0.16 | 2.824 | 0.73851 | 0.96917 | |
| RegenerationR3 | -0.012 | 2.824 | 0.98231 | 1.00000 | |
| RegenerationR4 | -0.466 | 2.824 | 0.41442 | 0.82297 | |
| RegenerationR5 | 0.209 | 2.824 | 0.67539 | 0.94304 | |
| RegenerationR6 | 0.663 | 2.824 | 0.24518 | 0.59296 | |
| RegenerationBL | -0.145 | 2.824 | 0.86606 | 1.00000 | |
| RegenerationTP | -0.005 | 2.824 | 0.99462 | 1.00000 |
Genes with expression patterns similar to MligTC455_35950
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35950 | 262 | 5.45 | Mlig455_010995 | Neo: Int S/G2/M Age: - |
SMC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_010995 {REF} {Length: 4761} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=217.4]; SMC proteins Flexible Hinge Domain [PF06470.15, score=80.0]; AAA domain [PF13476.8, score=66.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=33.7]; AAA ATPase domain [PF13175.8, score=29.2]} {Human: ENSG00000108055, SMC3, structural maintenance of chromosomes 3, [RH, Score=1218, Expect=0.0]} {Mouse: ENSMUSG00000024974, Smc3, structural maintenance of chromosomes 3, [RH, Score=1220, Expect=0.0]} {Dmel: FBgn0015615, SMC3, Structural maintenance of chromosomes 3, [RH, Score=1104, Expect=0.0]} {Celegans: WBGene00004873, smc-3, Structural maintenance of chromosomes protein 3, [RH, Score=819, Expect=0.0]} {Smed: dd_Smed_v6_3809_0_1, dd_Smed_v6_3809_0_1, [RH, Score=1481, Expect=0.0]} {RNA1509_2545, RNA1509_41345, RNA1509_43062} {RNA1310_2315.1, RNA1509_41345, RNA1509_43062} {RNA1509_41345, RNA1509_43062, RNA815_671} |
| 2. | MligTC455_35951 | 426 | 8.87 | Mlig455_011028 | Neo: Irradiation Age: - |
SMC3 | 2.877 | - | 0.958 | - | 0.984 | 0.935 | - | Mlig455_011028 {REF} {Length: 5295} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=166.8]; SMC proteins Flexible Hinge Domain [PF06470.15, score=78.8]} {Human: ENSG00000108055, SMC3, structural maintenance of chromosomes 3, [Score=1145, Expect=0.0]} {Mouse: ENSMUSG00000024974, Smc3, structural maintenance of chromosomes 3, [Score=1147, Expect=0.0]} {Dmel: FBgn0015615, SMC3, Structural maintenance of chromosomes 3, [Score=1035, Expect=0.0]} {Celegans: WBGene00004873, smc-3, Structural maintenance of chromosomes protein 3, [Score=749, Expect=0.0]} {Smed: dd_Smed_v6_3809_0_1, dd_Smed_v6_3809_0_1, [RH, Score=1405, Expect=0.0]} {RNA1509_2545, RNA1509_54608} {RNA1310_2315.1, RNA1509_54608} {RNA1509_54608, RNA815_671} |
| 3. | MligTC455_23204 | 85 | 1.76 | Mlig455_056581 | Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 3.882/0.00114 |
LRRK2 | 1.858 | - | 0.895 | - | - | 0.963 | - | Mlig455_056581 {REF} {Length: 9303} {Pfam: Leucine rich repeat [PF13855.8, score=96.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=69.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=62.9]; C-terminal of Roc, COR, domain [PF16095.7, score=45.2]; Ras family [PF00071.24, score=35.1]; Leucine-rich repeat [PF14580.8, score=23.9]} {Human: ENSG00000188906, LRRK2, leucine rich repeat kinase 2, [Score=396, Expect=6e-111]} {Mouse: ENSMUSG00000036273, Lrrk2, leucine-rich repeat kinase 2, [Score=407, Expect=3e-114]} {Dmel: FBgn0038816, Lrrk, Leucine-rich repeat kinase, [Score=139, Expect=3e-32]} {Celegans: WBGene00003068, lrk-1, Leucine-rich repeat serine/threonine-protein kinase 1, [Score=136, Expect=2e-31]} {Smed: dd_Smed_v6_7343_0_2, dd_Smed_v6_7343_0_2, [Score=328, Expect=2e-90]} {RNA1509_6991} {RNA1310_1909.1} {RNA815_15495.1} |
| 4. | MligTC455_27902 | 136 | 2.84 | Mlig455_019786 | Neo: - Age: - |
KAT2B | 1.775 | - | 0.957 | - | - | 0.818 | - | Mlig455_019786 {REF} {Length: 4280} {Pfam: PCAF (P300/CBP-associated factor) N-terminal domain [PF06466.13, score=194.4]; Bromodomain [PF00439.27, score=75.9]; Acetyltransferase (GNAT) family [PF00583.27, score=26.5]} {Human: ENSG00000114166, KAT2B, lysine acetyltransferase 2B, [RH, Score=439, Expect=4e-140]; ENSG00000108773, KAT2A, lysine acetyltransferase 2A, [RH, Score=422, Expect=1e-133]} {Mouse: ENSMUSG00000000708, Kat2b, K(lysine) acetyltransferase 2B, [RH, Score=447, Expect=8e-144]} {Dmel: FBgn0020388, Gcn5, Gcn5 acetyltransferase, [RH, Score=263, Expect=3e-75]} {Celegans: WBGene00021636, pcaf-1, P300/CBP Associated Factor homolog, [RH, Score=229, Expect=2e-63]} {Smed: dd_Smed_v6_11453_0_1, dd_Smed_v6_11453_0_1, [RH, Score=426, Expect=6e-140]} {RNA1509_19153} {RNA1310_2061.1} {RNA815_10396.1} |
| 5. | MligTC455_25218 | 1025 | 21.35 | Mlig455_021728 | Neo: - Age: - |
APC | 0.961 | - | - | - | - | - | 0.961 | Mlig455_021728 {REF} {Length: 7056} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=36.0]; SAMP Motif [PF05924.13, score=24.0]} {Human: ENSG00000134982, APC, APC, WNT signaling pathway regulator, [RH, Score=284, Expect=4e-76]; ENSG00000115266, APC2, APC2, WNT signaling pathway regulator, [RH, Score=270, Expect=4e-72]} {Mouse: ENSMUSG00000005871, Apc, adenomatosis polyposis coli, [RH, Score=283, Expect=6e-76]; ENSMUSG00000020135, Apc2, adenomatosis polyposis coli 2, [RH, Score=272, Expect=8e-73]} {Dmel: FBgn0015589, Apc, APC-like, [RH, Score=265, Expect=2e-70]} {Celegans: WBGene00000156, apr-1, Adenomatous polyposis coli protein-related protein 1, [RH, Score=124, Expect=6e-28]} {Smed: dd_Smed_v6_6966_0_1, dd_Smed_v6_6966_0_1, [RH, Score=235, Expect=5e-62]} {RNA1509_26796, RNA1509_3590} {RNA1310_116.2, RNA1509_26796} {RNA1509_26796, RNA815_4707} |
| 6. | MligTC455_46032 | 854 | 17.79 | Mlig455_031675 | Neo: - Age: Down-Up-Down |
TIPRL | 0.956 | - | - | - | 0.956 | - | - | Mlig455_031675 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: TIP41-like family [PF04176.15, score=173.2]} {Human: ENSG00000143155, TIPRL, TOR signaling pathway regulator, [RH, Score=177, Expect=6e-54]} {Mouse: ENSMUSG00000040843, Tiprl, TIP41, TOR signalling pathway regulator-like (S. cerevisiae), [RH, Score=179, Expect=7e-55]} {Dmel: FBgn0031094, CG9578, [RH, Score=146, Expect=2e-42]} {Celegans: WBGene00022803, ZK688.9, TIP41-like protein, [RH, Score=134, Expect=7e-38]} {Smed: dd_Smed_v6_8251_0_1, dd_Smed_v6_8251_0_1, [RH, Score=143, Expect=2e-41]} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1310_33083, RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645, RNA815_14908} |
| 7. | MligTC455_32869 | 551 | 11.49 | Mlig455_028343, Mlig455_066172 | Neo: - Age: Down-Up-Up |
0.951 | - | - | - | - | - | 0.951 | Mlig455_028343 {REF} {Length: 1388} {TRANSSPLICED} {Mouse: ENSMUSG00000026466, Tor1aip1, torsin A interacting protein 1, [Score=55.5, Expect=4e-08]} {RNA1509_35885} {RNA1310_16387.1} {RNA815_8873} Mlig455_066172 {REF} {Length: 2154} {TRANSSPLICED} {RNA1509_23176} {RNA1310_12450} {RNA815_4381} |
|
| 8. | MligTC455_51344 | 1909 | 39.78 | Mlig455_050206, Mlig455_066949 | Neo: - Age: - Region-enriched R4: 1.275/0.01137 |
PRR5-ARHGAP8 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_050206 {REF} {Length: 3344} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=135.0]; Divergent CRAL/TRIO domain [PF13716.8, score=130.5]; CRAL/TRIO domain [PF00650.22, score=33.9]} {Human: ENSG00000248405, PRR5-ARHGAP8, PRR5-ARHGAP8 readthrough, [RH, Score=365, Expect=2e-120]; ENSG00000241484, ARHGAP8, Rho GTPase activating protein 8, [RH, Score=364, Expect=1e-121]; ENSG00000175220, ARHGAP1, Rho GTPase activating protein 1, [RH, Score=347, Expect=1e-114]} {Mouse: ENSMUSG00000078954, Arhgap8, Rho GTPase activating protein 8, [RH, Score=352, Expect=7e-117]; ENSMUSG00000027247, Arhgap1, Rho GTPase activating protein 1, [RH, Score=348, Expect=9e-115]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [RH, Score=251, Expect=1e-77]} {Celegans: WBGene00012203, rga-1, Rho GTPase Activating protein, [RH, Score=273, Expect=3e-86]} {Smed: dd_Smed_v6_9467_0_1, dd_Smed_v6_9467_0_1, [RH, Score=448, Expect=2e-154]} {RNA1509_9606} {RNA1310_13022.1} {RNA815_3889} Mlig455_066949 {REF} {Length: 3476} {TRANSSPLICED} {Pfam: Divergent CRAL/TRIO domain [PF13716.8, score=130.5]; RhoGAP domain [PF00620.29, score=125.8]; CRAL/TRIO domain [PF00650.22, score=34.0]} {Human: ENSG00000248405, PRR5-ARHGAP8, PRR5-ARHGAP8 readthrough, [Score=339, Expect=4e-110]; ENSG00000241484, ARHGAP8, Rho GTPase activating protein 8, [Score=338, Expect=2e-111]; ENSG00000175220, ARHGAP1, Rho GTPase activating protein 1, [Score=323, Expect=1e-105]} {Mouse: ENSMUSG00000078954, Arhgap8, Rho GTPase activating protein 8, [Score=325, Expect=1e-106]; ENSMUSG00000027247, Arhgap1, Rho GTPase activating protein 1, [Score=324, Expect=8e-106]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=231, Expect=1e-70]} {Celegans: WBGene00012203, rga-1, Rho GTPase Activating protein, [Score=257, Expect=2e-80]} {Smed: dd_Smed_v6_9467_0_1, dd_Smed_v6_9467_0_1, [Score=411, Expect=3e-140]} {RNA1509_57416, RNA1509_9606} {RNA1310_13022.1, RNA1509_57416} {RNA1509_57416, RNA815_3889} |
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