Data search
Results for MligTC455_35951
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35951 | 426 | 8.87 | Mlig455_011028 | Neo: Irradiation Age: - |
SMC3 | Mlig455_011028 {REF} {Length: 5295} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=166.8]; SMC proteins Flexible Hinge Domain [PF06470.15, score=78.8]} {Human: ENSG00000108055, SMC3, structural maintenance of chromosomes 3, [Score=1145, Expect=0.0]} {Mouse: ENSMUSG00000024974, Smc3, structural maintenance of chromosomes 3, [Score=1147, Expect=0.0]} {Dmel: FBgn0015615, SMC3, Structural maintenance of chromosomes 3, [Score=1035, Expect=0.0]} {Celegans: WBGene00004873, smc-3, Structural maintenance of chromosomes protein 3, [Score=749, Expect=0.0]} {Smed: dd_Smed_v6_3809_0_1, dd_Smed_v6_3809_0_1, [RH, Score=1405, Expect=0.0]} {RNA1509_2545, RNA1509_54608} {RNA1310_2315.1, RNA1509_54608} {RNA1509_54608, RNA815_671} |
Cumulative graph for MligTC455_35951
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.294 | 3.355 | 0.80374 | 1.00000 | |
| RegionR2 | -0.475 | 3.355 | 0.42129 | 0.81249 | |
| RegionR3 | -0.15 | 3.355 | 0.75126 | 1.00000 | |
| RegionR4 | 0.187 | 3.355 | 0.73402 | 1.00000 | |
| RegionR5 | -0.415 | 3.355 | 0.36541 | 0.71791 | |
| RegionR6 | 0.282 | 3.355 | 0.55007 | 1.00000 | |
| RegionR7 | -0.05 | 3.355 | 0.93085 | 1.00000 | |
| RegionR8 | 0.327 | 3.355 | 0.62273 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.755 | 3.355 | 0.11625 | 0.84207 | |
| RegenerationR2 | 0.241 | 3.355 | 0.64983 | 0.93645 | |
| RegenerationR3 | -0.189 | 3.355 | 0.74092 | 0.96122 | |
| RegenerationR4 | -0.354 | 3.355 | 0.53890 | 0.88807 | |
| RegenerationR5 | -0.236 | 3.355 | 0.66675 | 0.93907 | |
| RegenerationR6 | -0.224 | 3.355 | 0.69562 | 0.92216 | |
| RegenerationBL | -1.495 | 3.355 | 0.05707 | 0.27703 | |
| RegenerationTP | -0.907 | 3.355 | 0.21374 | 0.65648 |
Genes with expression patterns similar to MligTC455_35951
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35951 | 426 | 8.87 | Mlig455_011028 | Neo: Irradiation Age: - |
SMC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011028 {REF} {Length: 5295} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=166.8]; SMC proteins Flexible Hinge Domain [PF06470.15, score=78.8]} {Human: ENSG00000108055, SMC3, structural maintenance of chromosomes 3, [Score=1145, Expect=0.0]} {Mouse: ENSMUSG00000024974, Smc3, structural maintenance of chromosomes 3, [Score=1147, Expect=0.0]} {Dmel: FBgn0015615, SMC3, Structural maintenance of chromosomes 3, [Score=1035, Expect=0.0]} {Celegans: WBGene00004873, smc-3, Structural maintenance of chromosomes protein 3, [Score=749, Expect=0.0]} {Smed: dd_Smed_v6_3809_0_1, dd_Smed_v6_3809_0_1, [RH, Score=1405, Expect=0.0]} {RNA1509_2545, RNA1509_54608} {RNA1310_2315.1, RNA1509_54608} {RNA1509_54608, RNA815_671} |
| 2. | MligTC455_35950 | 262 | 5.45 | Mlig455_010995 | Neo: Int S/G2/M Age: - |
SMC3 | 2.877 | - | 0.958 | - | 0.984 | 0.935 | - | Mlig455_010995 {REF} {Length: 4761} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=217.4]; SMC proteins Flexible Hinge Domain [PF06470.15, score=80.0]; AAA domain [PF13476.8, score=66.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=33.7]; AAA ATPase domain [PF13175.8, score=29.2]} {Human: ENSG00000108055, SMC3, structural maintenance of chromosomes 3, [RH, Score=1218, Expect=0.0]} {Mouse: ENSMUSG00000024974, Smc3, structural maintenance of chromosomes 3, [RH, Score=1220, Expect=0.0]} {Dmel: FBgn0015615, SMC3, Structural maintenance of chromosomes 3, [RH, Score=1104, Expect=0.0]} {Celegans: WBGene00004873, smc-3, Structural maintenance of chromosomes protein 3, [RH, Score=819, Expect=0.0]} {Smed: dd_Smed_v6_3809_0_1, dd_Smed_v6_3809_0_1, [RH, Score=1481, Expect=0.0]} {RNA1509_2545, RNA1509_41345, RNA1509_43062} {RNA1310_2315.1, RNA1509_41345, RNA1509_43062} {RNA1509_41345, RNA1509_43062, RNA815_671} |
| 3. | MligTC455_48493 | 942 | 19.63 | Mlig455_041636 | Neo: - Age: - |
DDX42 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_041636 {REF} {Length: 2613} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=158.9]; Helicase conserved C-terminal domain [PF00271.33, score=92.3]} {Human: ENSG00000198231, DDX42, DEAD-box helicase 42, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000020705, Ddx42, DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, [RH, Score=697, Expect=0.0]} {Dmel: FBgn0036104, CG6418, [RH, Score=704, Expect=0.0]} {Celegans: WBGene00008119, C46F11.4, [RH, Score=604, Expect=0.0]} {Smed: dd_Smed_v6_5205_0_1, dd_Smed_v6_5205_0_1, [RH, Score=773, Expect=0.0]} {RNA1509_5281, RNA1509_54259} {RNA1310_7512, RNA1509_5281, RNA1509_54259} {RNA1509_5281, RNA1509_54259, RNA815_2556} |
| 4. | MligTC455_32593 | 951 | 19.81 | Mlig455_064263 | Neo: Int S/G2/M Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_064263 {REF} {Length: 1861} {RNA1509_7288} {RNA1310_2032.1} {RNA815_9282} |
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