Data search
Results for MligTC455_46032
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46032 | 854 | 17.79 | Mlig455_031675 | Neo: - Age: Down-Up-Down |
TIPRL | Mlig455_031675 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: TIP41-like family [PF04176.15, score=173.2]} {Human: ENSG00000143155, TIPRL, TOR signaling pathway regulator, [RH, Score=177, Expect=6e-54]} {Mouse: ENSMUSG00000040843, Tiprl, TIP41, TOR signalling pathway regulator-like (S. cerevisiae), [RH, Score=179, Expect=7e-55]} {Dmel: FBgn0031094, CG9578, [RH, Score=146, Expect=2e-42]} {Celegans: WBGene00022803, ZK688.9, TIP41-like protein, [RH, Score=134, Expect=7e-38]} {Smed: dd_Smed_v6_8251_0_1, dd_Smed_v6_8251_0_1, [RH, Score=143, Expect=2e-41]} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1310_33083, RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645, RNA815_14908} |
Cumulative graph for MligTC455_46032
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.615 | 4.421 | 0.55480 | 1.00000 | |
| RegionR2 | 0.12 | 4.421 | 0.81723 | 1.00000 | |
| RegionR3 | -0.648 | 4.421 | 0.14611 | 0.65044 | |
| RegionR4 | -0.127 | 4.421 | 0.79542 | 1.00000 | |
| RegionR5 | 0.925 | 4.421 | 0.01164 | 0.06450 | |
| RegionR6 | 0.517 | 4.421 | 0.21648 | 0.79535 | |
| RegionR7 | -0.527 | 4.421 | 0.35054 | 0.98720 | |
| RegionR8 | 0.355 | 4.421 | 0.56417 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.298 | 4.421 | 0.45183 | 1.00000 | |
| RegenerationR2 | -0.079 | 4.421 | 0.86293 | 1.00000 | |
| RegenerationR3 | 0.406 | 4.421 | 0.42995 | 0.82115 | |
| RegenerationR4 | 0.206 | 4.421 | 0.68008 | 0.94570 | |
| RegenerationR5 | -0.139 | 4.421 | 0.75239 | 0.97245 | |
| RegenerationR6 | -0.225 | 4.421 | 0.64085 | 0.89382 | |
| RegenerationBL | 0.312 | 4.421 | 0.54705 | 0.90404 | |
| RegenerationTP | -0.114 | 4.421 | 0.85239 | 1.00000 |
Genes with expression patterns similar to MligTC455_46032
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46032 | 854 | 17.79 | Mlig455_031675 | Neo: - Age: Down-Up-Down |
TIPRL | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031675 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: TIP41-like family [PF04176.15, score=173.2]} {Human: ENSG00000143155, TIPRL, TOR signaling pathway regulator, [RH, Score=177, Expect=6e-54]} {Mouse: ENSMUSG00000040843, Tiprl, TIP41, TOR signalling pathway regulator-like (S. cerevisiae), [RH, Score=179, Expect=7e-55]} {Dmel: FBgn0031094, CG9578, [RH, Score=146, Expect=2e-42]} {Celegans: WBGene00022803, ZK688.9, TIP41-like protein, [RH, Score=134, Expect=7e-38]} {Smed: dd_Smed_v6_8251_0_1, dd_Smed_v6_8251_0_1, [RH, Score=143, Expect=2e-41]} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1310_33083, RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645, RNA815_14908} |
| 2. | MligTC455_15559 | 924 | 19.26 | Mlig455_000380 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.094/0.02109 |
2.558 | - | - | - | 0.853 | 0.968 | 0.737 | Mlig455_000380 {REF} {Length: 2523} {Pfam: RNA polymerase I specific transcription initiation factor RRN3 [PF05327.13, score=23.2]} {RNA1509_15896, RNA1509_37382} {RNA1310_14412.2, RNA1509_15896, RNA1509_37382} {RNA1509_15896, RNA1509_37382, RNA815_19215} | |
| 3. | MligTC455_30077 | 896 | 18.67 | Mlig455_020229 | Neo: Int S/G2/M Age: - Region-specific R5: 2.011 Region-enriched R5: 1.516/0.00005 |
DMAP1 | 1.848 | - | - | - | 0.951 | 0.897 | - | Mlig455_020229 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: DNA methyltransferase 1-associated protein 1 (DMAP1) [PF05499.14, score=141.8]; SANT/Myb-like domain of DAMP1 [PF16282.7, score=75.2]} {Human: ENSG00000178028, DMAP1, DNA methyltransferase 1 associated protein 1, [RH, Score=280, Expect=3e-88]} {Mouse: ENSMUSG00000009640, Dmap1, DNA methyltransferase 1-associated protein 1, [RH, Score=279, Expect=5e-88]} {Dmel: FBgn0034537, DMAP1, DNA methyltransferase 1 associated protein 1, [RH, Score=286, Expect=3e-91]} {Celegans: WBGene00013676, ekl-4, [RH, Score=215, Expect=1e-63]} {Smed: dd_Smed_v6_7743_0_1, dd_Smed_v6_7743_0_1, [RH, Score=260, Expect=5e-80]} {RNA1509_21087, RNA1509_31020, RNA1509_33111, RNA1509_35839} {RNA1310_16700, RNA1509_21087, RNA1509_31020, RNA1509_33111, RNA1509_35839} {RNA1509_21087, RNA1509_31020, RNA1509_33111, RNA1509_35839, RNA815_18517} |
| 4. | MligTC455_40870 | 1135 | 23.64 | Mlig455_033953 | Neo: Irradiation Age: - |
ZC3H14 | 1.831 | - | - | - | 0.951 | 0.880 | - | Mlig455_033953 {REF} {Length: 3368} {Pfam: RNA-binding, Nab2-type zinc finger [PF14608.8, score=50.9]; PWI domain [PF01480.19, score=20.4]} {Human: ENSG00000100722, ZC3H14, zinc finger CCCH-type containing 14, [RH, Score=152, Expect=1e-37]} {Mouse: ENSMUSG00000021012, Zc3h14, zinc finger CCCH type containing 14, [RH, Score=154, Expect=2e-38]} {Dmel: FBgn0028471, Nab2, Nuclear polyadenosine RNA-binding 2, [RH, Score=144, Expect=3e-35]} {Celegans: WBGene00022019, sut-2, Zinc finger CCCH domain-containing protein 14, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_3615_0_1, dd_Smed_v6_3615_0_1, [RH, Score=186, Expect=5e-51]} {RNA1509_27588, RNA1509_37892, RNA1509_44812, RNA1509_5215} {RNA1310_6449, RNA1509_27588, RNA1509_37892, RNA1509_44812, RNA1509_5215} {RNA1509_27588, RNA1509_37892, RNA1509_44812, RNA1509_5215, RNA815_8219} |
| 5. | MligTC455_15650 | 516 | 10.75 | Mlig455_059487 | Neo: - Age: - Region-enriched R5: 1.465/0.04797 |
TP53BP2 | 1.827 | - | - | - | 0.869 | - | 0.958 | Mlig455_059487 {REF} {Length: 3309} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.7]; Ankyrin repeats (many copies) [PF13637.8, score=62.4]; Ankyrin repeat [PF00023.32, score=46.9]; Ankyrin repeats (many copies) [PF13857.8, score=41.4]; Ankyrin repeat [PF13606.8, score=41.3]} {Human: ENSG00000143514, TP53BP2, tumor protein p53 binding protein 2, [RH, Score=194, Expect=4e-52]} {Mouse: ENSMUSG00000021285, Ppp1r13b, protein phosphatase 1, regulatory subunit 13B, [Score=192, Expect=1e-51]} {Dmel: FBgn0034606, ASPP, Ankyrin-repeat, SH3-domain, and Proline-rich-region containing Protein, [Score=197, Expect=3e-53]} {Celegans: WBGene00000146, ape-1, Apoptotic enhancer 1 protein, [Score=151, Expect=1e-40]} {Smed: dd_Smed_v6_6453_0_1, dd_Smed_v6_6453_0_1, [RH, Score=165, Expect=7e-43]} {RNA1509_19069} {RNA1310_9522.1, RNA1509_19069} {RNA1509_19069, RNA815_6121} |
| 6. | MligTC455_48751 | 2329 | 48.52 | Mlig455_013744 | Neo: Int S/G2/M Age: - |
NAT10 | 1.686 | - | - | - | 0.950 | 0.736 | - | Mlig455_013744 {REF} {Length: 3315} {TRANSSPLICED} {Pfam: GNAT acetyltransferase 2 [PF13718.8, score=306.7]; Helicase [PF05127.16, score=192.4]; Possible tRNA binding domain [PF13725.8, score=150.4]; Domain of unknown function (DUF1726) [PF08351.13, score=111.6]} {Human: ENSG00000135372, NAT10, N-acetyltransferase 10, [RH, Score=966, Expect=0.0]} {Mouse: ENSMUSG00000027185, Nat10, N-acetyltransferase 10, [RH, Score=957, Expect=0.0]} {Dmel: FBgn0027330, l(1)G0020, lethal (1) G0020, [RH, Score=876, Expect=0.0]} {Celegans: WBGene00018866, nath-10, RNA cytidine acetyltransferase, [RH, Score=854, Expect=0.0]} {Smed: dd_Smed_v6_10566_0_1, dd_Smed_v6_10566_0_1, [RH, Score=619, Expect=0.0]} {RNA1509_31593, RNA1509_44132, RNA1509_6732} {RNA1310_3627.1, RNA1509_31593, RNA1509_44132, RNA1509_6732} {RNA1509_31593, RNA1509_44132, RNA1509_6732, RNA815_1182} |
| 7. | MligTC455_47422 | 922 | 19.21 | Mlig455_051461 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.112/0.03317 |
CPSF4 | 1.679 | - | - | - | 0.958 | 0.721 | - | Mlig455_051461 {REF} {Length: 1537} {TRANSSPLICED} {Pfam: Zinc finger domain [PF18345.3, score=62.5]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=57.3]; Torus domain [PF16131.7, score=34.2]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.9]; CCCH-type zinc finger [PF18044.3, score=29.7]; Zinc-finger containing family [PF15663.7, score=29.2]; Zinc knuckle [PF00098.25, score=20.7]} {Human: ENSG00000160917, CPSF4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Mouse: ENSMUSG00000029625, Cpsf4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Dmel: FBgn0015621, Clp, Clipper, [RH, Score=249, Expect=7e-80]} {Celegans: WBGene00044329, cpsf-4, Cleavage and Polyadenylation Specificity Factor, [RH, Score=235, Expect=2e-74]} {Smed: dd_Smed_v6_4069_0_1, dd_Smed_v6_4069_0_1, [RH, Score=259, Expect=4e-84]} {RNA1509_31717} {RNA1310_19692.1} {RNA815_8519} |
| 8. | MligTC455_22466 | 707 | 14.72 | Mlig455_058979 | Neo: - |
CASP2 | 1.658 | - | - | - | 0.954 | 0.704 | - | Mlig455_058979 {REF} {Length: 4652} {Pfam: Caspase domain [PF00656.24, score=84.4]} {Human: ENSG00000106144, CASP2, caspase 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000029863, Casp2, caspase 2, [Score=55.8, Expect=2e-07]} {RNA1509_57931} {RNA1310_10391.1} {RNA815_5832.1} |
| 9. | MligTC455_09399 | 1048 | 21.83 | Mlig455_028623, Mlig455_028647 | Neo: - |
GNPTAB | 0.959 | - | - | - | 0.959 | - | - | Mlig455_028623 {REF} {Length: 4789} {Pfam: Stealth protein CR2, conserved region 2 [PF11380.10, score=160.8]; Stealth protein CR4, conserved region 4 [PF17103.7, score=56.6]; Stealth protein CR3, conserved region 3 [PF17102.7, score=51.1]; LNR domain [PF00066.19, score=44.0]; Stealth protein CR1, conserved region 1 [PF17101.7, score=39.7]} {Human: ENSG00000111670, GNPTAB, N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, [RH, Score=291, Expect=2e-81]} {Mouse: ENSMUSG00000035311, Gnptab, N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits, [RH, Score=274, Expect=6e-76]} {Dmel: FBgn0033392, CG8027, [RH, Score=201, Expect=6e-54]} {Smed: dd_Smed_v6_6309_0_1, dd_Smed_v6_6309_0_1, [RH, Score=245, Expect=3e-67]} {RNA1509_31005} {RNA1310_13459} {RNA815_4778} Mlig455_028647 {REF} {Length: 4932} {TRANSSPLICED} {Pfam: Stealth protein CR2, conserved region 2 [PF11380.10, score=160.6]; Stealth protein CR4, conserved region 4 [PF17103.7, score=56.5]; Stealth protein CR3, conserved region 3 [PF17102.7, score=51.0]; LNR domain [PF00066.19, score=43.9]; Stealth protein CR1, conserved region 1 [PF17101.7, score=39.6]} {Human: ENSG00000111670, GNPTAB, N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, [RH, Score=295, Expect=1e-82]} {Mouse: ENSMUSG00000035311, Gnptab, N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits, [RH, Score=274, Expect=9e-76]} {Dmel: FBgn0033392, CG8027, [RH, Score=201, Expect=7e-54]} {Smed: dd_Smed_v6_6309_0_1, dd_Smed_v6_6309_0_1, [RH, Score=246, Expect=3e-67]} {RNA1509_31005} {RNA1310_13459} {RNA815_4778} |
| 10. | MligTC455_11084 | 212 | 4.41 | Mlig455_020417 | Neo: - |
SUPT3H | 0.959 | - | - | - | 0.959 | - | - | Mlig455_020417 {REF} {Length: 1509} {TRANSSPLICED} {Pfam: Transcription initiation factor IID, 18kD subunit [PF02269.18, score=28.0]} {Human: ENSG00000196284, SUPT3H, SPT3 homolog, SAGA and STAGA complex component, [Score=58.9, Expect=1e-09]} {Mouse: ENSMUSG00000038954, Supt3, suppressor of Ty 3, [Score=61.2, Expect=2e-10]} {RNA1310_31583.1} {RNA815_40072} |
| 11. | MligTC455_35950 | 262 | 5.45 | Mlig455_010995 | Neo: Int S/G2/M Age: - |
SMC3 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_010995 {REF} {Length: 4761} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=217.4]; SMC proteins Flexible Hinge Domain [PF06470.15, score=80.0]; AAA domain [PF13476.8, score=66.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=33.7]; AAA ATPase domain [PF13175.8, score=29.2]} {Human: ENSG00000108055, SMC3, structural maintenance of chromosomes 3, [RH, Score=1218, Expect=0.0]} {Mouse: ENSMUSG00000024974, Smc3, structural maintenance of chromosomes 3, [RH, Score=1220, Expect=0.0]} {Dmel: FBgn0015615, SMC3, Structural maintenance of chromosomes 3, [RH, Score=1104, Expect=0.0]} {Celegans: WBGene00004873, smc-3, Structural maintenance of chromosomes protein 3, [RH, Score=819, Expect=0.0]} {Smed: dd_Smed_v6_3809_0_1, dd_Smed_v6_3809_0_1, [RH, Score=1481, Expect=0.0]} {RNA1509_2545, RNA1509_41345, RNA1509_43062} {RNA1310_2315.1, RNA1509_41345, RNA1509_43062} {RNA1509_41345, RNA1509_43062, RNA815_671} |
| 12. | MligTC455_41788 | 2241 | 46.68 | Mlig455_062584 | Neo: Int S/G2/M Age: - |
HNRNPU | 0.954 | - | - | - | 0.954 | - | - | Mlig455_062584 {REF} {Length: 4700} {Pfam: AAA domain [PF13671.8, score=65.4]; SAP domain [PF02037.29, score=41.0]; SPRY domain [PF00622.30, score=36.9]} {Human: ENSG00000153187, HNRNPU, heterogeneous nuclear ribonucleoprotein U, [Score=231, Expect=2e-62]} {Mouse: ENSMUSG00000111145, Hnrnpu, heterogeneous nuclear ribonucleoprotein U, [Score=233, Expect=2e-63]; ENSMUSG00000039630, Hnrnpu, heterogeneous nuclear ribonucleoprotein U, [Score=233, Expect=2e-63]} {Dmel: FBgn0050122, CG30122, [Score=145, Expect=1e-34]} {Celegans: WBGene00012769, hrpu-1, Heterogeneous nuclear RibonucleoProtein U, [Score=125, Expect=5e-29]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=264, Expect=3e-72]} {RNA1509_16487, RNA1509_2596, RNA1509_47282, RNA1509_57980} {RNA1310_1119, RNA1509_16487, RNA1509_2596, RNA1509_47282, RNA1509_57980} {RNA1509_16487, RNA1509_2596, RNA1509_47282, RNA1509_57980, RNA815_630.1} |
| 13. | MligTC455_30818 | 71 | 1.48 | Mlig455_013032 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_013032 {REF} {Length: 1090} {TRANSSPLICED} {RNA1509_38085} {RNA1310_25316.2} {RNA815_12860} | |
| 14. | MligTC455_17325 | 946 | 19.7 | Mlig455_020480 | Neo: - Age: Down-Up-Up Region-enriched R5: 2.284/0.00000 |
0.951 | - | - | 0.951 | - | - | - | Mlig455_020480 {REF} {Length: 922} {TRANSSPLICED} {RNA1509_31242} {RNA1310_36884, RNA1509_31242} {RNA1509_31242, RNA815_22323} | |
| 15. | MligTC455_49990 | 5612 | 116.92 | Mlig455_020609 | Neo: - Age: - |
RPS16 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_020609 {REF} {Length: 603} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=111.4]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=245, Expect=2e-84]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=245, Expect=1e-84]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=243, Expect=8e-84]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=218, Expect=3e-74]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=207, Expect=7e-70]} {RNA1509_2533, RNA1509_4015} {RNA1310_59020.1, RNA1509_2533, RNA1509_4015} {RNA1509_2533, RNA1509_4015, RNA815_30730} |
| 16. | MligTC455_50179 | 764 | 15.91 | Mlig455_021186 | Neo: - Age: - |
TST | 0.95 | - | - | - | - | 0.950 | - | Mlig455_021186 {REF} {Length: 1272} {TRANSSPLICED} {Pfam: Rhodanese-like domain [PF00581.22, score=82.4]} {Human: ENSG00000128311, TST, thiosulfate sulfurtransferase, [RH, Score=219, Expect=1e-69]; ENSG00000128309, MPST, mercaptopyruvate sulfurtransferase, [RH, Score=210, Expect=3e-66]} {Mouse: ENSMUSG00000044986, Tst, thiosulfate sulfurtransferase, mitochondrial, [RH, Score=210, Expect=3e-66]} {Celegans: WBGene00010383, mpst-3, Sulfurtransferase, [RH, Score=88.2, Expect=6e-20]} {RNA1509_5878} {RNA1310_28461, RNA1509_5878} {RNA1509_5878, RNA815_15541} |
Berezikov Lab - 2020-2021 © ERIBA