TomoSeq data search

Data search

Results for MligTC455_36087

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36087

78

1.63

Mlig455_033950

Neo: -

Age: -

Mlig455_033950 {REF} {Length: 2975} {RNA1310_107185.1}

Cumulative graph for MligTC455_36087

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.233	1.621	1.00000	1.00000
RegionR2	2.874	1.621	0.08170	0.35028
RegionR3	-0.845	1.621	1.00000	1.00000
RegionR4	0.137	1.621	0.46876	0.79672
RegionR5	-0.974	1.621	1.00000	1.00000
RegionR6	1.973	1.621	0.12551	0.64348
RegionR7	-1.214	1.621	1.00000	1.00000
RegionR8	-0.718	1.621	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.97	1.621	0.99995	1.00000
RegenerationR2	1.375	1.621	0.22431	0.67154
RegenerationR3	4.496	1.621	0.01680	0.23703
RegenerationR4	1.424	1.621	0.35159	0.78154
RegenerationR5	3.33	1.621	0.02517	0.27014
RegenerationR6	2.044	1.621	0.16588	0.49638
RegenerationBL	4.108	1.621	0.03961	0.22595
RegenerationTP	4.934	1.621	0.05192	0.37286

Genes with expression patterns similar to MligTC455_36087

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36087	78	1.63	Mlig455_033950	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_033950 {REF} {Length: 2975} {RNA1310_107185.1}
2.	MligTC455_21792	120	2.5	Mlig455_019461, Mlig455_062164	Neo: - Age: -		1.824	-	-	-	0.973	-	0.851	Mlig455_019461 {REF} {Length: 1989} {RNA1509_57867} {RNA1310_75051} {RNA815_43995.1} Mlig455_062164 {REF} {Length: 1297} {RNA1509_57867} {RNA1310_23482} {RNA815_21848}
3.	MligTC455_13875	92	1.92	Mlig455_025418	Neo: - Age: -		1.731	-	-	0.980	-	-	0.751	Mlig455_025418 {REF} {Length: 631} {NoTransDecoderORF}
4.	MligTC455_44532	114	2.38	Mlig455_011871	Neo: - Age: -		0.981	-	-	0.981	-	-	-	Mlig455_011871 {REF} {Length: 1178} {TRANSSPLICED} {RNA1509_38790, RNA1509_59200} {RNA1310_25247, RNA1509_59200} {RNA1509_59200, RNA815_24666}
5.	MligTC455_27813	66	1.37	Mlig455_071014	Neo: - Age: -		0.974	-	-	-	-	-	0.974	Mlig455_071014 {REF} {Length: 2810} {RNA1509_55315} {RNA1310_683.1} {RNA815_2170.1}
6.	MligTC455_42366	135	2.82	Mlig455_039082	Neo: - Age: Down-Down-Up		0.971	-	-	-	0.971	-	-	Mlig455_039082 {REF} {Length: 2147} {RNA1509_36917} {RNA1310_11029.2, RNA1509_36917} {RNA1509_36917, RNA815_9526}
7.	MligTC455_14493	18	0.37	Mlig455_005482	Neo: - Age: - Regeneration-upregulated R3: 2.722 Regeneration-enriched R3: 2.722		0.97	-	-	-	0.970	-	-	Mlig455_005482 {REF} {Length: 2571} {RNA1310_19406}
8.	MligTC455_43398	31	0.65	Mlig455_068365	Neo: - Age: -	GRIA1	0.97	-	-	-	0.970	-	-	Mlig455_068365 {REF} {Length: 3108} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=77.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=40.4]} {Human: ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=77.4, Expect=3e-16]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=75.5, Expect=8e-17]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=74.7, Expect=2e-15]} {Mouse: ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=77.0, Expect=2e-16]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=74.7, Expect=1e-15]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=74.7, Expect=1e-15]} {Dmel: FBgn0026255, clumsy, [Score=74.7, Expect=9e-16]} {Celegans: WBGene00001617, glr-6, GLutamate Receptor family (AMPA), [Score=80.9, Expect=6e-18]} {Smed: dd_Smed_v6_20242_0_1, dd_Smed_v6_20242_0_1, [Score=74.7, Expect=5e-16]} {RNA1310_18228} {RNA815_23153}
9.	MligTC455_26833	22	0.46	Mlig455_048301	Neo: - Age: -	OPLAH	0.969	-	-	-	0.969	-	-	Mlig455_048301 {REF} {Length: 4436} {Pfam: Hydantoinase B/oxoprolinase [PF02538.16, score=626.3]; Hydantoinase/oxoprolinase [PF01968.20, score=350.5]; Hydantoinase/oxoprolinase N-terminal region [PF05378.15, score=203.7]; Hydantoinase/oxoprolinase C-terminal domain [PF19278.1, score=36.1]} {Human: ENSG00000178814, OPLAH, 5-oxoprolinase, ATP-hydrolysing, [RH, Score=1454, Expect=0.0]} {Mouse: ENSMUSG00000022562, Oplah, 5-oxoprolinase (ATP-hydrolysing), [RH, Score=1424, Expect=0.0]} {Dmel: FBgn0034733, CG4752, [RH, Score=1391, Expect=0.0]} {Celegans: WBGene00021430, Y38F2AR.12, [RH, Score=1409, Expect=0.0]} {Smed: dd_Smed_v6_5008_0_1, dd_Smed_v6_5008_0_1, [Score=989, Expect=0.0]} {RNA1509_2948, RNA1509_37889} {RNA1310_1508.1, RNA1509_37889} {RNA1509_37889, RNA815_468}
10.	MligTC455_08735	46	0.96	Mlig455_028395	Neo: - Age: - Regeneration-upregulated R2: 5.641 Regeneration-enriched R2: 5.641		0.963	-	-	-	-	-	0.963	Mlig455_028395 {REF} {Length: 2509} {TRANSSPLICED} {NoTransDecoderORF}
11.	MligTC455_01224	39	0.82	Mlig455_025513	Neo: - Age: -		0.958	-	-	-	0.958	-	-	Mlig455_025513 {REF} {Length: 240} {NoTransDecoderORF}
12.	MligTC455_13979	31	0.65	Mlig455_035061, Mlig455_035080	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_035061 {REF} {Length: 1063} {NoTransDecoderORF} {RNA1509_30671} {RNA1310_58628} Mlig455_035080 {REF} {Length: 536} {NoTransDecoderORF} {RNA1310_58628}
13.	MligTC455_31867	118	2.46	Mlig455_015324	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_015324 {REF} {Length: 4165} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=18.7]} {RNA1509_44743, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1310_5450.1, RNA1509_45704, RNA1509_45713, RNA1509_55716} {RNA1509_45704, RNA1509_45713, RNA1509_55716, RNA815_16253.2}
14.	MligTC455_41277	22	0.46	Mlig455_032641	Neo: - Age: - Region-enriched R4: 7.631/0.01115		0.95	-	-	-	0.950	-	-	Mlig455_032641 {REF} {Length: 4347} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=94.8]} {Celegans: WBGene00022815, asic-1, Degenerin-like protein asic-1, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=64.3, Expect=2e-10]} {RNA1509_50860} {RNA1310_22749} {RNA815_18495}

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