TomoSeq data search

Data search

Results for MligTC455_27813

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27813	66	1.37	Mlig455_071014	Neo: - Age: -		Mlig455_071014 {REF} {Length: 2810} {RNA1509_55315} {RNA1310_683.1} {RNA815_2170.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_27813

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.574	1.361	0.99953	1.00000
RegionR2	2.246	1.361	0.19891	0.55896
RegionR3	2.416	1.361	0.15323	0.66218
RegionR4	1.926	1.361	0.20056	0.48010
RegionR5	0.686	1.361	0.85087	1.00000
RegionR6	0.265	1.361	0.71469	1.00000
RegionR7	-1.838	1.361	0.99989	1.00000
RegionR8	-2.126	1.361	0.99981	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.921	1.361	0.62148	1.00000
RegenerationR2	0.547	1.361	0.58165	0.90786
RegenerationR3	-0.571	1.361	0.72263	0.95525
RegenerationR4	0.392	1.361	0.67536	0.94415
RegenerationR5	2.565	1.361	0.04348	0.34189
RegenerationR6	2.231	1.361	0.15914	0.48702
RegenerationBL	4.741	1.361	0.01241	0.11420
RegenerationTP	4.138	1.361	0.12553	0.53596

Genes with expression patterns similar to MligTC455_27813

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27813	66	1.37	Mlig455_071014	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_071014 {REF} {Length: 2810} {RNA1509_55315} {RNA1310_683.1} {RNA815_2170.1}
2.	MligTC455_34014	33	0.69	Mlig455_033785	Neo: - Age: -		1.755	-	-	0.957	-	0.798	-	Mlig455_033785 {REF} {Length: 5958} {RNA1509_56561} {RNA1310_25982} {RNA815_38909}
3.	MligTC455_07711	15	0.31	Mlig455_035975	Neo: - Age: -		0.99	-	-	0.990	-	-	-	Mlig455_035975 {REF} {Length: 476} {NoTransDecoderORF} {RNA1509_35506} {RNA1310_3152.3} {RNA815_24414}
4.	MligTC455_11015	19	0.4	Mlig455_010464	Neo: - Age: Up-Down-Up		0.985	-	-	0.985	-	-	-	Mlig455_010464 {REF} {Length: 1551} {RNA1310_22199.1} {RNA815_10412}
5.	MligTC455_16866	18	0.37	Mlig455_065296	Neo: - Age: -		0.984	-	-	0.984	-	-	-	Mlig455_065296 {REF} {Length: 1827} {RNA1310_92472}
6.	MligTC455_16867	18	0.37	Mlig455_065319	Neo: - Age: -		0.984	-	-	0.984	-	-	-	Mlig455_065319 {REF} {Length: 1743} {RNA1310_92472}
7.	MligTC455_12384	30	0.62	Mlig455_014121, Mlig455_014129	Neo: - Age: - Regeneration-downregulated R2: -5.903 Regeneration-depleted R2: -5.903	MARK3, MARK4	0.982	-	-	0.982	-	-	-	Mlig455_014121 {REF} {Length: 3626} {Pfam: Protein kinase domain [PF00069.27, score=234.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.3]; Kinase-like [PF14531.8, score=26.9]; ABC1 atypical kinase-like domain [PF03109.18, score=21.4]; Ternary complex associated domain 9 [PF19974.1, score=18.3]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=219, Expect=7e-60]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=215, Expect=2e-58]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=212, Expect=2e-57]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=217, Expect=4e-59]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=215, Expect=1e-58]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=213, Expect=1e-57]} {Dmel: FBgn0026063, KP78b, [Score=218, Expect=1e-60]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=220, Expect=5e-59]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=414, Expect=7e-133]} {RNA1310_41210} {RNA815_38347} Mlig455_014129 {REF} {Length: 3531} {Pfam: Protein kinase domain [PF00069.27, score=107.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.2]} {Human: ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=93.2, Expect=3e-19]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=86.7, Expect=3e-17]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=84.0, Expect=2e-16]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0262103, Sik3, Salt-inducible kinase 3, [Score=87.4, Expect=2e-17]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=86.3, Expect=3e-17]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=151, Expect=1e-38]} {RNA1310_80369} {RNA815_38347}
8.	MligTC455_51127	32	0.66	Mlig455_054349	Neo: - Age: -	GLRA2	0.982	-	-	0.982	-	-	-	Mlig455_054349 {REF} {Length: 2070} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=108.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=317, Expect=6e-102]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=316, Expect=1e-101]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=312, Expect=3e-100]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=317, Expect=3e-102]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=316, Expect=1e-101]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=308, Expect=1e-98]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=3e-91]} {Celegans: WBGene00020767, lgc-40, Ligand-Gated ion Channel, [RH, Score=260, Expect=4e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=261, Expect=1e-80]} {RNA1310_34255} {RNA815_61641}
9.	MligTC455_23233	270	5.63	Mlig455_006672	Neo: - Age: -		0.979	-	-	-	-	0.979	-	Mlig455_006672 {REF} {Length: 6289} {Smed: dd_Smed_v6_2802_0_1, dd_Smed_v6_2802_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_1489} {RNA1310_997.1} {RNA815_1017.1}
10.	MligTC455_33016	46	0.96	Mlig455_030897	Neo: - Age: -	UTP20	0.979	-	-	0.979	-	-	-	Mlig455_030897 {REF} {Length: 9860} {TRANSSPLICED} {Pfam: Down-regulated in metastasis [PF07539.14, score=169.0]} {Human: ENSG00000120800, UTP20, UTP20, small subunit processome component, [Score=269, Expect=3e-71]} {Mouse: ENSMUSG00000004356, Utp20, UTP20 small subunit processome component, [RH, Score=271, Expect=3e-72]} {Dmel: FBgn0034734, CG4554, [RH, Score=181, Expect=6e-45]} {Celegans: WBGene00007050, utp-20, UTP small subunit (SSU) processome component homolog, [RH, Score=167, Expect=7e-41]} {Smed: dd_Smed_v6_5777_0_1, dd_Smed_v6_5777_0_1, [Score=130, Expect=1e-29]} {RNA1509_30314} {RNA1310_332, RNA1509_30314} {RNA1509_30314, RNA815_127.1}
11.	MligTC455_36087	78	1.63	Mlig455_033950	Neo: - Age: -		0.974	-	-	-	-	-	0.974	Mlig455_033950 {REF} {Length: 2975} {RNA1310_107185.1}
12.	MligTC455_12393	23	0.48	Mlig455_065564	Neo: - Age: -	SSTR5	0.972	-	-	0.972	-	-	-	Mlig455_065564 {REF} {Length: 2085} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=121.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=24.9]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=91.3, Expect=2e-19]; ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=89.4, Expect=1e-18]} {Mouse: ENSMUSG00000045052, Prlhr, prolactin releasing hormone receptor, [Score=103, Expect=8e-24]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=102, Expect=2e-23]; ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=102, Expect=3e-23]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=114, Expect=8e-27]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=7e-23]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [Score=191, Expect=5e-54]} {RNA1509_59439} {RNA1310_49826} {RNA815_38569}
13.	MligTC455_01695	25	0.52	Mlig455_015208	Neo: - Age: -		0.971	-	-	0.971	-	-	-	Mlig455_015208 {REF} {Length: 605} {NoTransDecoderORF} {RNA1509_45595} {RNA1310_13430.1} {RNA815_343.1}
14.	MligTC455_28116	36	0.74	Mlig455_023222, Mlig455_068295	Neo: - Age: Down-Down-Up		0.971	-	-	0.971	-	-	-	Mlig455_023222 {REF} {Length: 2305} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1} Mlig455_068295 {REF} {Length: 1692} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}
15.	MligTC455_22876	54	1.12	Mlig455_021938	Neo: Int S/G2/M Age: - Region-enriched R5: 4.065/0.00368		0.969	-	-	-	-	0.969	-	Mlig455_021938 {REF} {Length: 2936} {NoTransDecoderORF} {RNA1509_57421} {RNA1310_19938.2} {RNA815_11593}
16.	MligTC455_18746	23	0.47	Mlig455_024831	Neo: - Age: - Region-enriched R4: 8.220/0.00001 Regeneration-depleted R4: -6.352 Regeneration-depleted R3: -3.721 Regeneration-depleted R2: -1.825		0.968	-	-	0.968	-	-	-	Mlig455_024831 {REF} {Length: 1230} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_9302} {RNA1310_672.1} {RNA815_6919}
17.	MligTC455_22231	40	0.84	Mlig455_032140	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_032140 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_38388} {RNA1310_14332} {RNA815_16291}
18.	MligTC455_51298	56	1.17	Mlig455_004013	Neo: - Age: -	NCOR1	0.964	-	-	-	-	0.964	-	Mlig455_004013 {REF} {Length: 4600} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=23.2]} {Human: ENSG00000141027, NCOR1, nuclear receptor corepressor 1, [Score=177, Expect=5e-44]; ENSG00000196498, NCOR2, nuclear receptor corepressor 2, [Score=173, Expect=1e-42]} {Mouse: ENSMUSG00000018501, Ncor1, nuclear receptor co-repressor 1, [Score=177, Expect=4e-44]; ENSMUSG00000029478, Ncor2, nuclear receptor co-repressor 2, [Score=176, Expect=1e-43]} {Dmel: FBgn0265523, Smr, Smrter, [Score=169, Expect=1e-41]} {Smed: dd_Smed_v6_7709_0_1, dd_Smed_v6_7709_0_1, [Score=185, Expect=3e-47]} {RNA1509_55924} {RNA1310_3476.1} {RNA815_1593}
19.	MligTC455_40614	25	0.52	Mlig455_030882	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_030882 {REF} {Length: 1647} {RNA1509_37399} {RNA1310_18527} {RNA815_9560}
20.	MligTC455_43506	73	1.53	Mlig455_006107	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.595		0.961	-	-	0.961	-	-	-	Mlig455_006107 {REF} {Length: 703} {RNA1509_17222} {RNA1310_44913.1} {RNA815_37256}
21.	MligTC455_12304	42	0.87	Mlig455_070558	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_070558 {REF} {Length: 1968} {Pfam: Integrase core domain [PF00665.28, score=29.3]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=56.2, Expect=6e-11]} {RNA1509_21400} {RNA1310_37574} {RNA815_2733.1}
22.	MligTC455_08735	46	0.96	Mlig455_028395	Neo: - Age: - Regeneration-upregulated R2: 5.641 Regeneration-enriched R2: 5.641		0.955	-	-	-	-	-	0.955	Mlig455_028395 {REF} {Length: 2509} {TRANSSPLICED} {NoTransDecoderORF}
23.	MligTC455_21752	31	0.64	Mlig455_020642	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_020642 {REF} {Length: 1945} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=28.9]} {RNA1509_12420} {RNA1310_73865} {RNA815_13104.1}
24.	MligTC455_48942	1132	23.58	Mlig455_065618, Mlig455_065630	Neo: - Age: Down-Down-Up		0.955	-	-	-	0.955	-	-	Mlig455_065618 {REF} {Length: 2944} {Dmel: FBgn0261649, tinc, tincar, [Score=85.1, Expect=1e-16]} {Smed: dd_Smed_v6_5564_0_1, dd_Smed_v6_5564_0_1, [Score=188, Expect=5e-51]} {RNA1509_19669, RNA1509_53121} {RNA1310_5673, RNA1509_19669, RNA1509_53121} {RNA1509_19669, RNA1509_53121, RNA815_17154} Mlig455_065630 {REF} {Length: 2933} {Dmel: FBgn0261649, tinc, tincar, [Score=85.1, Expect=1e-16]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=191, Expect=3e-51]} {RNA1509_19669} {RNA1310_5673} {RNA815_17154}
25.	MligTC455_29061	287	5.98	Mlig455_061344	Neo: - Age: Up-Up-Down		0.953	-	-	0.953	-	-	-	Mlig455_061344 {REF} {Length: 4569} {RNA1509_40044} {RNA1310_6084, RNA1509_40044} {RNA1509_40044, RNA815_5170.1}
26.	MligTC455_45915	38	0.79	Mlig455_025387	Neo: - Age: - Region-enriched R5: 3.133/0.04924	TRAF3IP1	0.953	-	-	0.953	-	-	-	Mlig455_025387 {REF} {Length: 1590} {Pfam: Microtubule-binding protein MIP-T3 C-terminal region [PF17749.3, score=132.0]; Takusan [PF04822.15, score=19.6]} {Human: ENSG00000204104, TRAF3IP1, TRAF3 interacting protein 1, [Score=162, Expect=5e-43]} {Mouse: ENSMUSG00000034292, Traf3ip1, TRAF3 interacting protein 1, [Score=163, Expect=1e-43]} {Celegans: WBGene00001127, dyf-11, [Score=65.9, Expect=2e-11]} {Smed: dd_Smed_v6_10562_0_1, dd_Smed_v6_10562_0_1, [Score=121, Expect=1e-29]} {RNA1509_5107} {RNA1310_14186.1} {RNA815_2859}
27.	MligTC455_37714	41	0.85	Mlig455_008662, Mlig455_008673	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_008662 {REF} {Length: 573} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_104721} {RNA815_64453} Mlig455_008673 {REF} {Length: 573} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_104721} {RNA815_64453}
28.	MligTC455_48029	995	20.73	Mlig455_031836	Neo: - Age: Down-Down-Up Region-enriched R5: 2.093/0.00069 Regeneration-upregulated BL: 2.388 Regeneration-enriched BL: 2.388	SPSB4	0.951	-	-	-	0.951	-	-	Mlig455_031836 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=65.7]; SOCS box [PF07525.18, score=33.4]} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=316, Expect=3e-107]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=315, Expect=5e-107]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=316, Expect=2e-107]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=311, Expect=1e-105]} {Dmel: FBgn0026238, gus, gustavus, [Score=306, Expect=1e-103]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=262, Expect=1e-84]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=213, Expect=1e-66]} {RNA1509_16638} {RNA1310_11847} {RNA815_5105}
29.	MligTC455_29013	169	3.51	Mlig455_000723	Neo: - Age: Down-Up-Down	SGTB	0.95	-	-	-	-	-	0.950	Mlig455_000723 {REF} {Length: 3505} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=53.5]; Tetratricopeptide repeat [PF07719.19, score=48.2]; TPR repeat [PF13414.8, score=34.7]; Tetratricopeptide repeat [PF13432.8, score=32.7]; Tetratricopeptide repeat [PF13181.8, score=25.9]; Tetratricopeptide repeat [PF13428.8, score=24.6]; Tetratricopeptide repeat [PF13371.8, score=23.3]; Tetratricopeptide repeat [PF13431.8, score=21.3]} {Human: ENSG00000197860, SGTB, small glutamine rich tetratricopeptide repeat containing beta, [Score=80.5, Expect=4e-18]} {Mouse: ENSMUSG00000042743, Sgtb, small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta, [Score=79.7, Expect=4e-17]} {Dmel: FBgn0024352, Stip1, Stress induced phosphoprotein 1, [Score=63.9, Expect=2e-11]} {Celegans: WBGene00019983, sti-1, Stress-induced-phosphoprotein 1, [Score=61.6, Expect=6e-11]} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [Score=63.5, Expect=1e-11]} {RNA1509_38333} {RNA1310_8166} {RNA815_3887}