TomoSeq data search

Data search

Results for MligTC455_36597

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36597

1013

21.10

Mlig455_018326

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.315

EIF3A

Mlig455_018326 {REF} {Length: 4467} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=27.4]} {Human: ENSG00000107581, EIF3A, eukaryotic translation initiation factor 3 subunit A, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000024991, Eif3a, eukaryotic translation initiation factor 3, subunit A, [RH, Score=663, Expect=0.0]} {Dmel: FBgn0037249, eIF3a, eukaryotic translation initiation factor 3 subunit a, [RH, Score=550, Expect=2e-176]} {Celegans: WBGene00001209, egl-45, Eukaryotic translation initiation factor 3 subunit A, [RH, Score=437, Expect=1e-134]} {Smed: dd_Smed_v6_804_0_1, dd_Smed_v6_804_0_1, [RH, Score=550, Expect=4e-179]} {RNA1509_747} {RNA1310_2722} {RNA815_884}

Cumulative graph for MligTC455_36597

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.933	4.714	0.09416	0.65635
RegionR2	0.993	4.714	0.03430	0.21225
RegionR3	0.208	4.714	0.56710	1.00000
RegionR4	-0.607	4.714	0.19814	0.47698
RegionR5	0.621	4.714	0.04717	0.17998
RegionR6	0.425	4.714	0.23793	0.82146
RegionR7	0.919	4.714	0.03338	0.34824
RegionR8	-0.626	4.714	0.33923	0.97334

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.566	4.714	0.16811	0.91014
RegenerationR2	0.102	4.714	0.79440	0.98793
RegenerationR3	1.191	4.714	0.00557	0.13451
RegenerationR4	1.604	4.714	0.00025	0.01341
RegenerationR5	0.682	4.714	0.06505	0.40169
RegenerationR6	1.498	4.714	0.00020	0.01344
RegenerationBL	0.736	4.714	0.19555	0.53156
RegenerationTP	0.827	4.714	0.13618	0.55380

Genes with expression patterns similar to MligTC455_36597

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36597	1013	21.1	Mlig455_018326	Neo: Int S/G2/M Age: logFC(26M/2M)=0.315	EIF3A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018326 {REF} {Length: 4467} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=27.4]} {Human: ENSG00000107581, EIF3A, eukaryotic translation initiation factor 3 subunit A, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000024991, Eif3a, eukaryotic translation initiation factor 3, subunit A, [RH, Score=663, Expect=0.0]} {Dmel: FBgn0037249, eIF3a, eukaryotic translation initiation factor 3 subunit a, [RH, Score=550, Expect=2e-176]} {Celegans: WBGene00001209, egl-45, Eukaryotic translation initiation factor 3 subunit A, [RH, Score=437, Expect=1e-134]} {Smed: dd_Smed_v6_804_0_1, dd_Smed_v6_804_0_1, [RH, Score=550, Expect=4e-179]} {RNA1509_747} {RNA1310_2722} {RNA815_884}
2.	MligTC455_52073	1651	34.4	Mlig455_021526	Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.373	EBNA1BP2	2.584	-	-	-	0.951	0.768	0.865	Mlig455_021526 {REF} {Length: 1654} {TRANSSPLICED} {Pfam: Eukaryotic rRNA processing protein EBP2 [PF05890.14, score=228.6]} {Human: ENSG00000117395, EBNA1BP2, EBNA1 binding protein 2, [RH, Score=145, Expect=7e-41]} {Mouse: ENSMUSG00000028729, Ebna1bp2, EBNA1 binding protein 2, [RH, Score=149, Expect=2e-42]} {Dmel: FBgn0039828, CG1542, [RH, Score=114, Expect=2e-29]} {Celegans: WBGene00015941, C18A3.3, Probable rRNA-processing protein EBP2 homolog, [RH, Score=113, Expect=1e-28]} {Smed: dd_Smed_v6_5945_0_1, dd_Smed_v6_5945_0_1, [RH, Score=99.0, Expect=2e-24]} {RNA1509_36264, RNA1509_4962} {RNA1310_18974, RNA1509_36264, RNA1509_4962} {RNA1509_36264, RNA1509_4962, RNA815_15170}
3.	MligTC455_46200	2796	58.25	Mlig455_034025, Mlig455_060403	Neo: Int S/G2/M Age: - Region-specific R5: 1.725 Region-enriched R5: 1.218/0.00004	OXA1L	2.573	-	0.724	-	0.966	-	0.883	Mlig455_034025 {REF} {Length: 1735} {TRANSSPLICED} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [Score=68.6, Expect=7e-12]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0027615, CG6404, [Score=96.7, Expect=2e-21]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [Score=68.9, Expect=1e-12]} {Smed: dd_Smed_v6_4072_0_1, dd_Smed_v6_4072_0_1, [Score=86.3, Expect=3e-18]} {RNA1509_31165, RNA1509_39218} {RNA1310_17991, RNA1509_31165, RNA1509_39218} {RNA1509_31165, RNA1509_39218, RNA815_490.2} Mlig455_060403 {REF} {Length: 1732} {TRANSSPLICED} {Human: ENSG00000155463, OXA1L, OXA1L, mitochondrial inner membrane protein, [Score=68.6, Expect=6e-12]} {Mouse: ENSMUSG00000000959, Oxa1l, oxidase assembly 1-like, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0027615, CG6404, [Score=94.0, Expect=2e-20]} {Celegans: WBGene00007215, oxa-1, OXA mitochondrial inner membrane insertase homolog, [Score=69.3, Expect=1e-12]} {Smed: dd_Smed_v6_4072_0_1, dd_Smed_v6_4072_0_1, [Score=86.7, Expect=2e-18]} {RNA1509_18325, RNA1509_39218, RNA1509_45152} {RNA1310_17991, RNA1509_18325, RNA1509_45152} {RNA1509_18325, RNA1509_45152, RNA815_490.2}
4.	MligTC455_37098	996	20.75	Mlig455_012279	Neo: Neoblast Age: Up-Down-Up, logFC(26M/2M)=0.528 Region-enriched R4: 1.139/0.02113		2.437	-	0.748	-	0.952	0.737	-	Mlig455_012279 {REF} {Length: 197} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15555} {RNA1310_36361.1} {RNA815_342.1}
5.	MligTC455_26728	326	6.8	Mlig455_070831	Neo: Int S/G2/M Age: - Region-enriched R5: 2.171/0.00634	NUP205	2.423	-	0.741	-	0.954	0.728	-	Mlig455_070831 {REF} {Length: 7040} {TRANSSPLICED} {Pfam: Nuclear pore complex scaffold, nucleoporins 186/192/205 [PF11894.10, score=517.5]} {Human: ENSG00000155561, NUP205, nucleoporin 205, [RH, Score=580, Expect=1e-171]} {Mouse: ENSMUSG00000038759, Nup205, nucleoporin 205, [Score=565, Expect=3e-166]} {Dmel: FBgn0031078, Nup205, Nucleoporin 205kD, [Score=254, Expect=3e-67]} {Celegans: WBGene00003789, npp-3, Nuclear Pore complex Protein, [Score=84.7, Expect=7e-16]} {Smed: dd_Smed_v6_3533_0_1, dd_Smed_v6_3533_0_1, [Score=369, Expect=7e-103]} {RNA1509_7576} {RNA1310_395.1} {RNA815_27319}
6.	MligTC455_40161	347	7.23	Mlig455_056886	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.909/0.01019		1.749	0.795	-	-	0.954	-	-	Mlig455_056886 {REF} {Length: 643} {TRANSSPLICED} {RNA1509_32321} {RNA1310_57583, RNA1509_32321} {RNA1509_32321, RNA815_54259}
7.	MligTC455_11264	2630	54.79	Mlig455_007585	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.309	EIF2A	1.728	-	-	-	0.953	0.775	-	Mlig455_007585 {REF} {Length: 1687} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=92.3]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [Score=186, Expect=4e-52]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [Score=186, Expect=6e-52]} {Dmel: FBgn0037135, CG7414, [Score=146, Expect=1e-37]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [Score=128, Expect=1e-31]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [Score=79.3, Expect=9e-16]} {RNA1509_12274} {RNA1310_9127.2} {RNA815_2839.1}
8.	MligTC455_11265	5352	111.51	Mlig455_020754, Mlig455_020820, Mlig455_036064	Neo: Int S/G2/M Age: -	EIF2A	1.724	-	-	-	0.954	0.770	-	Mlig455_020754 {REF} {Length: 235} {NoTransDecoderORF} {RNA1509_22711} {RNA1310_72032} {RNA815_2839.1} Mlig455_020820 {REF} {Length: 2711} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_1548} {RNA1310_9127.2} {RNA815_2839.1} Mlig455_036064 {REF} {Length: 2582} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1310_9127.2, RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835, RNA815_2839.1}
9.	MligTC455_19668	814	16.96	Mlig455_048937	Neo: - Age: -	METAP2	1.696	-	-	-	0.950	0.746	-	Mlig455_048937 {REF} {Length: 1513} {Pfam: Metallopeptidase family M24 [PF00557.26, score=142.2]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [Score=504, Expect=3e-179]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [Score=501, Expect=9e-178]} {Dmel: FBgn0283478, und, uninitiated, [Score=492, Expect=1e-174]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [Score=486, Expect=2e-172]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [Score=504, Expect=2e-180]} {RNA1509_6431} {RNA1310_15348} {RNA815_5667}
10.	MligTC455_47275	412	8.59	Mlig455_027967	Neo: - Age: -	PYROXD1	1.692	0.721	-	-	0.971	-	-	Mlig455_027967 {REF} {Length: 2000} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=86.4]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=25.8]; Rubredoxin NAD+ reductase C-terminal domain [PF18267.3, score=21.8]; FAD dependent oxidoreductase [PF01266.26, score=19.3]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]} {Human: ENSG00000121350, PYROXD1, pyridine nucleotide-disulphide oxidoreductase domain 1, [RH, Score=250, Expect=2e-75]} {Mouse: ENSMUSG00000041671, Pyroxd1, pyridine nucleotide-disulphide oxidoreductase domain 1, [RH, Score=252, Expect=3e-76]} {Dmel: FBgn0032846, CG10721, [RH, Score=188, Expect=7e-53]} {Celegans: WBGene00007744, C26D10.3, [RH, Score=145, Expect=2e-37]} {Smed: dd_Smed_v6_7078_0_1, dd_Smed_v6_7078_0_1, [RH, Score=191, Expect=5e-54]} {RNA1509_19660, RNA1509_50319} {RNA1310_14472, RNA1509_50319} {RNA1509_50319, RNA815_8119}
11.	MligTC455_22328	1046	21.78	Mlig455_024145, Mlig455_024156	Neo: - Age: -	PTGES2	0.969	-	-	-	0.969	-	-	Mlig455_024145 {REF} {Length: 2157} {TRANSSPLICED} {Pfam: RNA transcription, translation and transport factor protein [PF10036.11, score=223.0]; Glutaredoxin [PF00462.26, score=43.6]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=41.9]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=30.6]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=20.7]; Glutathione S-transferase, C-terminal domain [PF13410.8, score=20.6]} {Human: ENSG00000148334, PTGES2, prostaglandin E synthase 2, [RH, Score=214, Expect=2e-63]} {Mouse: ENSMUSG00000026820, Ptges2, prostaglandin E synthase 2, [RH, Score=213, Expect=6e-63]} {Dmel: FBgn0004465, Su(P), Suppressor of ref(2)P sterility, [RH, Score=210, Expect=9e-62]} {Celegans: WBGene00011239, pges-2, ProstaGlandin E Synthase homolog, [RH, Score=239, Expect=9e-74]} {Smed: dd_Smed_v6_6741_0_1, dd_Smed_v6_6741_0_1, [RH, Score=254, Expect=1e-79]} {RNA1509_41821} {RNA1310_20059} {RNA815_10948} Mlig455_024156 {REF} {Length: 1096} {Human: ENSG00000148334, PTGES2, prostaglandin E synthase 2, [RH, Score=130, Expect=1e-37]} {Mouse: ENSMUSG00000026820, Ptges2, prostaglandin E synthase 2, [Score=134, Expect=3e-37]} {Dmel: FBgn0004465, Su(P), Suppressor of ref(2)P sterility, [Score=131, Expect=4e-36]} {Celegans: WBGene00011239, pges-2, ProstaGlandin E Synthase homolog, [Score=156, Expect=3e-46]} {Smed: dd_Smed_v6_6741_0_1, dd_Smed_v6_6741_0_1, [Score=156, Expect=9e-47]} {RNA1509_24174} {RNA1310_20059} {RNA815_10948}
12.	MligTC455_03203	5	0.11	Mlig455_045689	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_045689 {REF} {Length: 707} {NoTransDecoderORF} {RNA1310_128965} {RNA815_19721}
13.	MligTC455_43487	779	16.24	Mlig455_044278	Neo: Int S/G2/M Age: -	HSDL2	0.955	-	-	-	-	0.955	-	Mlig455_044278 {REF} {Length: 3491} {Pfam: short chain dehydrogenase [PF00106.27, score=117.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=106.5]; SCP-2 sterol transfer family [PF02036.19, score=67.4]; Alkyl sulfatase C-terminal [PF14864.8, score=23.8]; KR domain [PF08659.12, score=23.0]} {Human: ENSG00000119471, HSDL2, hydroxysteroid dehydrogenase like 2, [RH, Score=396, Expect=2e-135]} {Mouse: ENSMUSG00000028383, Hsdl2, hydroxysteroid dehydrogenase like 2, [RH, Score=353, Expect=1e-117]} {Dmel: FBgn0039537, CG5590, [RH, Score=423, Expect=2e-146]} {Celegans: WBGene00000970, dhs-6, DeHydrogenases, Short chain, [RH, Score=424, Expect=5e-147]} {Smed: dd_Smed_v6_956_0_1, dd_Smed_v6_956_0_1, [RH, Score=409, Expect=4e-141]} {RNA1509_25648, RNA1509_3344, RNA1509_42869} {RNA1310_15933.1, RNA1509_25648, RNA1509_3344, RNA1509_42869} {RNA1509_25648, RNA1509_3344, RNA1509_42869, RNA815_6689}
14.	MligTC455_45233	1587	33.07	Mlig455_005544, Mlig455_036202	Neo: Irradiation Age: - Region-enriched R5: 2.793/0.00000		0.954	-	-	-	0.954	-	-	Mlig455_005544 {REF} {Length: 302} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41201} {RNA1310_4034.2} {RNA815_13005.1} Mlig455_036202 {REF} {Length: 305} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41201} {RNA1310_4034.2} {RNA815_13005.1}
15.	MligTC455_19669	811	16.89	Mlig455_045322	Neo: Int S/G2/M Age: -	NUP62	0.953	-	-	-	0.953	-	-	Mlig455_045322 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Nsp1-like C-terminal region [PF05064.15, score=93.5]} {Human: ENSG00000213024, NUP62, nucleoporin 62, [RH, Score=194, Expect=2e-54]} {Mouse: ENSMUSG00000109511, Nup62, nucleoporin 62, [RH, Score=195, Expect=8e-55]} {Dmel: FBgn0034118, Nup62, Nucleoporin 62kD, [RH, Score=162, Expect=4e-44]} {Smed: dd_Smed_v6_3978_0_1, dd_Smed_v6_3978_0_1, [RH, Score=127, Expect=8e-34]} {RNA1509_56898} {RNA1310_9604.1, RNA1509_56898} {RNA1509_56898, RNA815_24758}
16.	MligTC455_29336	634	13.2	Mlig455_048109	Neo: - Age: Up-Down-Up	DOCK9	0.953	-	-	-	0.953	-	-	Mlig455_048109 {REF} {Length: 4298} {Pfam: Dock homology region 2 [PF06920.15, score=365.8]} {Human: ENSG00000088387, DOCK9, dedicator of cytokinesis 9, [Score=362, Expect=3e-106]; ENSG00000147251, DOCK11, dedicator of cytokinesis 11, [Score=355, Expect=5e-104]} {Mouse: ENSMUSG00000025558, Dock9, dedicator of cytokinesis 9, [Score=365, Expect=2e-107]; ENSMUSG00000031093, Dock11, dedicator of cytokinesis 11, [Score=355, Expect=5e-104]} {Dmel: FBgn0260486, Ziz, Zizimin, [Score=332, Expect=2e-96]} {Celegans: WBGene00018520, F46H5.4, [Score=200, Expect=2e-52]} {Smed: dd_Smed_v6_2660_0_8, dd_Smed_v6_2660_0_8, [Score=272, Expect=2e-76]} {RNA1509_10943} {RNA1310_1197.2} {RNA815_16972}
17.	MligTC455_26336	865	18.01	Mlig455_045204	Neo: Int S/G2/M Age: -	DUS3L	0.952	-	-	-	0.952	-	-	Mlig455_045204 {REF} {Length: 4331} {Pfam: Dihydrouridine synthase (Dus) [PF01207.19, score=169.6]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=23.1]; Exonuclease VII, large subunit [PF02601.17, score=19.7]} {Human: ENSG00000141994, DUS3L, dihydrouridine synthase 3 like, [RH, Score=465, Expect=4e-159]} {Mouse: ENSMUSG00000007603, Dus3l, dihydrouridine synthase 3-like (S. cerevisiae), [RH, Score=459, Expect=1e-153]} {Dmel: FBgn0032819, CG10463, [RH, Score=442, Expect=7e-148]} {Celegans: WBGene00021377, Y37E11B.5, tRNA-dihydrouridine(47) synthase [NAD(P)(+)], [RH, Score=366, Expect=4e-119]} {Smed: dd_Smed_v6_8477_0_1, dd_Smed_v6_8477_0_1, [Score=442, Expect=1e-148]} {RNA1509_51412} {RNA1310_18572.1} {RNA815_9098}
18.	MligTC455_28865	175	3.64	Mlig455_011624	Neo: - Age: Down-Up-Down	EHMT1	0.951	-	-	-	0.951	-	-	Mlig455_011624 {REF} {Length: 4018} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=95.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.5]; Ankyrin repeats (many copies) [PF13857.8, score=66.4]; Ankyrin repeat [PF00023.32, score=56.5]; Ankyrin repeat [PF13606.8, score=47.6]} {Human: ENSG00000181090, EHMT1, euchromatic histone lysine methyltransferase 1, [Score=81.3, Expect=5e-16]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=78.6, Expect=1e-14]} {Mouse: ENSMUSG00000036893, Ehmt1, euchromatic histone methyltransferase 1, [Score=81.6, Expect=1e-15]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=68.2, Expect=1e-11]} {Celegans: WBGene00001411, fem-1, Sex-determining protein fem-1, [Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=70.1, Expect=2e-12]} {RNA1509_28052} {RNA1310_14237} {RNA815_22032}
19.	MligTC455_47565	196	4.08	Mlig455_022176	Neo: - Age: -	GATAD1	0.951	-	-	-	0.951	-	-	Mlig455_022176 {REF} {Length: 1469} {TRANSSPLICED} {Human: ENSG00000157259, GATAD1, GATA zinc finger domain containing 1, [Score=82.4, Expect=4e-18]} {Mouse: ENSMUSG00000007415, Gatad1, GATA zinc finger domain containing 1, [Score=80.9, Expect=1e-17]} {RNA1509_44979} {RNA1310_57214.1} {RNA815_28936}

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