Data search


search
Exact
Search

Results for MligTC455_19668

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19668 814 16.96 Mlig455_048937

Neo: -

Age: -

METAP2 Mlig455_048937 {REF} {Length: 1513} {Pfam: Metallopeptidase family M24 [PF00557.26, score=142.2]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [Score=504, Expect=3e-179]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [Score=501, Expect=9e-178]} {Dmel: FBgn0283478, und, uninitiated, [Score=492, Expect=1e-174]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [Score=486, Expect=2e-172]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [Score=504, Expect=2e-180]} {RNA1509_6431} {RNA1310_15348} {RNA815_5667}

Cumulative graph for MligTC455_19668

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.002 4.33 0.99635 1.00000
RegionR2 1.194 4.33 0.04626 0.25447
RegionR3 0.272 4.33 0.56150 1.00000
RegionR4 -1.767 4.33 0.00213 0.01874
RegionR5 -0.066 4.33 0.87102 1.00000
RegionR6 0.341 4.33 0.45905 1.00000
RegionR7 -0.169 4.33 0.77216 1.00000
RegionR8 0.193 4.33 0.77676 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.724 4.33 0.23985 0.96582
RegenerationR2 0.376 4.33 0.51380 0.87722
RegenerationR3 1.045 4.33 0.09901 0.50262
RegenerationR4 1.867 4.33 0.00396 0.08620
RegenerationR5 0.699 4.33 0.21149 0.64551
RegenerationR6 1.692 4.33 0.00396 0.07533
RegenerationBL 1.207 4.33 0.06693 0.30137
RegenerationTP 0.65 4.33 0.38688 0.82054


Genes with expression patterns similar to MligTC455_19668

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19668 814 16.96 Mlig455_048937

Neo: -

Age: -

METAP2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_048937 {REF} {Length: 1513} {Pfam: Metallopeptidase family M24 [PF00557.26, score=142.2]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [Score=504, Expect=3e-179]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [Score=501, Expect=9e-178]} {Dmel: FBgn0283478, und, uninitiated, [Score=492, Expect=1e-174]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [Score=486, Expect=2e-172]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [Score=504, Expect=2e-180]} {RNA1509_6431} {RNA1310_15348} {RNA815_5667}
2. MligTC455_26336 865 18.01 Mlig455_045204

Neo: Int S/G2/M

Age: -

DUS3L 2.479 0.757 0.760 - 0.962 - - Mlig455_045204 {REF} {Length: 4331} {Pfam: Dihydrouridine synthase (Dus) [PF01207.19, score=169.6]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=23.1]; Exonuclease VII, large subunit [PF02601.17, score=19.7]} {Human: ENSG00000141994, DUS3L, dihydrouridine synthase 3 like, [RH, Score=465, Expect=4e-159]} {Mouse: ENSMUSG00000007603, Dus3l, dihydrouridine synthase 3-like (S. cerevisiae), [RH, Score=459, Expect=1e-153]} {Dmel: FBgn0032819, CG10463, [RH, Score=442, Expect=7e-148]} {Celegans: WBGene00021377, Y37E11B.5, tRNA-dihydrouridine(47) synthase [NAD(P)(+)], [RH, Score=366, Expect=4e-119]} {Smed: dd_Smed_v6_8477_0_1, dd_Smed_v6_8477_0_1, [Score=442, Expect=1e-148]} {RNA1509_51412} {RNA1310_18572.1} {RNA815_9098}
3. MligTC455_11265 5352 111.51 Mlig455_020754, Mlig455_020820, Mlig455_036064

Neo: Int S/G2/M

Age: -

EIF2A 2.396 - - - 0.956 0.715 0.725

Mlig455_020754 {REF} {Length: 235} {NoTransDecoderORF} {RNA1509_22711} {RNA1310_72032} {RNA815_2839.1}

Mlig455_020820 {REF} {Length: 2711} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_1548} {RNA1310_9127.2} {RNA815_2839.1}

Mlig455_036064 {REF} {Length: 2582} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1310_9127.2, RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835, RNA815_2839.1}
4. MligTC455_11264 2630 54.79 Mlig455_007585

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.309

EIF2A 2.379 - - - 0.954 0.722 0.703 Mlig455_007585 {REF} {Length: 1687} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=92.3]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [Score=186, Expect=4e-52]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [Score=186, Expect=6e-52]} {Dmel: FBgn0037135, CG7414, [Score=146, Expect=1e-37]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [Score=128, Expect=1e-31]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [Score=79.3, Expect=9e-16]} {RNA1509_12274} {RNA1310_9127.2} {RNA815_2839.1}
5. MligTC455_46157 2381 49.61 Mlig455_043690

Neo: -

Age: -

Region-enriched R4: 1.390/0.00101

EHD1 1.765 - - - 0.953 - 0.812 Mlig455_043690 {REF} {Length: 3391} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5600) [PF18150.3, score=143.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=62.1]; N-terminal EH-domain containing protein [PF16880.7, score=58.8]; Dynamin family [PF00350.25, score=54.1]; 50S ribosome-binding GTPase [PF01926.25, score=34.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]; EF hand [PF00036.34, score=20.0]} {Human: ENSG00000110047, EHD1, EH domain containing 1, [RH, Score=709, Expect=0.0]; ENSG00000013016, EHD3, EH domain containing 3, [RH, Score=704, Expect=0.0]; ENSG00000103966, EHD4, EH domain containing 4, [RH, Score=693, Expect=0.0]} {Mouse: ENSMUSG00000024772, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000107039, Ehd1, EH-domain containing 1, [RH, Score=710, Expect=0.0]; ENSMUSG00000024065, Ehd3, EH-domain containing 3, [RH, Score=697, Expect=0.0]; ENSMUSG00000027293, Ehd4, EH-domain containing 4, [RH, Score=690, Expect=0.0]} {Dmel: FBgn0016693, Past1, Putative Achaete Scute Target 1, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00004373, rme-1, Receptor Mediated Endocytosis; Receptor-mediated endocytosis 1 isoform I, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_3148_0_1, dd_Smed_v6_3148_0_1, [RH, Score=739, Expect=0.0]} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_2034, RNA1509_22003} {RNA1310_6511.3, RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003} {RNA1509_10447, RNA1509_18982, RNA1509_19631, RNA1509_22003, RNA815_5849.2}
6. MligTC455_44305 2330 48.55 Mlig455_002521

Neo: -

Age: -

PABPN1 1.729 - - - 0.778 0.951 - Mlig455_002521 {REF} {Length: 1194} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=64.1]} {Human: ENSG00000100836, PABPN1, poly(A) binding protein nuclear 1, [RH, Score=186, Expect=1e-57]; ENSG00000258643, BCL2L2-PABPN1, BCL2L2-PABPN1 readthrough, [RH, Score=181, Expect=2e-55]} {Mouse: ENSMUSG00000022194, Pabpn1, poly(A) binding protein, nuclear 1, [RH, Score=184, Expect=2e-57]; ENSMUSG00000092232, Gm20521, predicted gene 20521, [RH, Score=180, Expect=2e-55]} {Dmel: FBgn0005648, Pabp2, [RH, Score=218, Expect=7e-72]} {Celegans: WBGene00003904, pabp-2, PolyA Binding Protein (Nuclear), [RH, Score=157, Expect=4e-48]} {Smed: dd_Smed_v6_2924_0_1, dd_Smed_v6_2924_0_1, [RH, Score=150, Expect=2e-45]} {RNA1509_10120, RNA1509_16224} {RNA1310_27727, RNA1509_10120, RNA1509_16224} {RNA1509_10120, RNA1509_16224, RNA815_12820}
7. MligTC455_36597 1013 21.1 Mlig455_018326

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.315

EIF3A 1.696 - - - 0.950 0.746 - Mlig455_018326 {REF} {Length: 4467} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=27.4]} {Human: ENSG00000107581, EIF3A, eukaryotic translation initiation factor 3 subunit A, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000024991, Eif3a, eukaryotic translation initiation factor 3, subunit A, [RH, Score=663, Expect=0.0]} {Dmel: FBgn0037249, eIF3a, eukaryotic translation initiation factor 3 subunit a, [RH, Score=550, Expect=2e-176]} {Celegans: WBGene00001209, egl-45, Eukaryotic translation initiation factor 3 subunit A, [RH, Score=437, Expect=1e-134]} {Smed: dd_Smed_v6_804_0_1, dd_Smed_v6_804_0_1, [RH, Score=550, Expect=4e-179]} {RNA1509_747} {RNA1310_2722} {RNA815_884}
8. MligTC455_41418 653 13.61 Mlig455_022023

Neo: -

Age: -

0.969 - - - 0.969 - - Mlig455_022023 {REF} {Length: 2593} {TRANSSPLICED} {RNA1509_10112} {RNA1310_27932} {RNA815_11765.1}
9. MligTC455_42930 454 9.46 Mlig455_021401

Neo: -

Age: Down-Up-Up

0.967 - - - 0.967 - - Mlig455_021401 {REF} {Length: 2364} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=54.6]} {Smed: dd_Smed_v6_2248_0_1, dd_Smed_v6_2248_0_1, [RH, Score=90.1, Expect=5e-23]} {RNA1509_35535} {RNA1310_33600, RNA1509_35535} {RNA1509_35535, RNA815_19822}
10. MligTC455_32672 285 5.95 Mlig455_003822

Neo: -

Age: Down-Up-Down

VTI1A 0.963 - - - 0.963 - - Mlig455_003822 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: Vesicle transport v-SNARE protein N-terminus [PF05008.17, score=59.4]; Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=54.7]; Sec20 [PF03908.15, score=21.9]} {Human: ENSG00000151532, VTI1A, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=173, Expect=1e-53]} {Mouse: ENSMUSG00000024983, Vti1a, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=175, Expect=3e-54]} {Dmel: FBgn0260862, Vti1a, Vesicle transport through interaction with t-SNAREs 1a, [RH, Score=144, Expect=2e-42]} {Celegans: WBGene00013302, vti-1, VTI (Vesicle Transport through t-SNARE Interaction) homolog, [Score=113, Expect=1e-30]} {Smed: dd_Smed_v6_5094_0_1, dd_Smed_v6_5094_0_1, [RH, Score=155, Expect=3e-47]} {RNA1509_11936} {RNA1310_29540.1, RNA1509_11936} {RNA1509_11936, RNA815_14399}
11. MligTC455_25374 428 8.91 Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

Regeneration-upregulated BL: 5.459

Regeneration-enriched BL: 5.459

0.962 - - - 0.962 - -

Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463}

Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}
12. MligTC455_53734 59 1.23 Mlig455_055711

Neo: -

Age: -

0.962 - - - 0.962 - - Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
13. MligTC455_34713 3644 75.91 Mlig455_012307, Mlig455_031867, Mlig455_031949

Neo: Neoblast, stringent

Age: -

KPNB1 0.959 - - - 0.959 - -

Mlig455_012307 {REF} {Length: 183} {NoTransDecoderORF}

Mlig455_031867 {REF} {Length: 3866} {Pfam: HEAT-like repeat [PF13513.8, score=57.4]; HEAT repeat [PF02985.24, score=40.9]; Importin-beta N-terminal domain [PF03810.21, score=39.1]; HEAT repeats [PF13646.8, score=37.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=23.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.0]} {Human: ENSG00000108424, KPNB1, karyopherin subunit beta 1, [RH, Score=976, Expect=0.0]} {Mouse: ENSMUSG00000001440, Kpnb1, karyopherin (importin) beta 1, [RH, Score=972, Expect=0.0]} {Dmel: FBgn0262743, Fs(2)Ket, Female sterile (2) Ketel, [RH, Score=874, Expect=0.0]} {Celegans: WBGene00002075, imb-1, IMportin Beta family, [RH, Score=720, Expect=0.0]} {Smed: dd_Smed_v6_3466_0_1, dd_Smed_v6_3466_0_1, [RH, Score=863, Expect=0.0]} {RNA1509_1919} {RNA1310_2969} {RNA815_850.1}

Mlig455_031949 {REF} {Length: 3861} {Pfam: HEAT-like repeat [PF13513.8, score=58.9]; HEAT repeat [PF02985.24, score=41.2]; Importin-beta N-terminal domain [PF03810.21, score=39.0]; HEAT repeats [PF13646.8, score=36.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=24.0]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=23.1]} {Human: ENSG00000108424, KPNB1, karyopherin subunit beta 1, [RH, Score=983, Expect=0.0]} {Mouse: ENSMUSG00000001440, Kpnb1, karyopherin (importin) beta 1, [RH, Score=979, Expect=0.0]} {Dmel: FBgn0262743, Fs(2)Ket, Female sterile (2) Ketel, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00002075, imb-1, IMportin Beta family, [RH, Score=728, Expect=0.0]} {Smed: dd_Smed_v6_3466_0_1, dd_Smed_v6_3466_0_1, [RH, Score=871, Expect=0.0]} {RNA1509_10050, RNA1509_1919} {RNA1310_2969, RNA1509_10050} {RNA1509_10050, RNA815_850.1}
14. MligTC455_38450 112 2.33 Mlig455_015678

Neo: -

Age: Down-Up-Up

0.959 - - - 0.959 - - Mlig455_015678 {REF} {Length: 2581} {TRANSSPLICED} {RNA1509_12124} {RNA1310_17271} {RNA815_24512}
15. MligTC455_16231 113 2.36 Mlig455_011361

Neo: -

Age: logFC(26M/2M)=-1.629

0.956 - - - 0.956 - - Mlig455_011361 {REF} {Length: 717} {TRANSSPLICED} {RNA1509_1634, RNA1509_44264} {RNA1310_62516, RNA1509_1634} {RNA1509_1634, RNA815_22723}
16. MligTC455_16445 142 2.97 Mlig455_020621

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.128/0.00036

0.955 - - - 0.955 - - Mlig455_020621 {REF} {Length: 2993} {TRANSSPLICED} {Pfam: linker histone H1 and H5 family [PF00538.21, score=50.6]; F-box-like [PF12937.9, score=34.5]; F-box domain [PF00646.35, score=23.1]} {Mouse: ENSMUSG00000048520, Fbxl13, F-box and leucine-rich repeat protein 13, [Score=58.9, Expect=1e-08]} {Dmel: FBgn0053837, His1:CG33837, [Score=58.5, Expect=3e-09]} {Smed: dd_Smed_v6_601_0_1, dd_Smed_v6_601_0_1, [Score=58.9, Expect=1e-09]} {RNA1509_29982, RNA1509_39270} {RNA1310_13041, RNA1509_39270} {RNA1509_39270, RNA815_27586}
17. MligTC455_23355 380 7.91 Mlig455_047433

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 1.922/0.03999

Regeneration-upregulated BL: 4.169

Regeneration-enriched BL: 4.169

GEMIN5 0.955 - - - 0.955 - - Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032}
18. MligTC455_34803 655 13.65 Mlig455_030101

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.174/0.04108

0.955 - - - - 0.955 - Mlig455_030101 {REF} {Length: 808} {TRANSSPLICED} {Pfam: Phytochelatin synthase [PF05023.16, score=81.9]} {Celegans: WBGene00003960, pcs-1, PhytoChelatin Synthase, [Score=62.4, Expect=2e-11]} {RNA1509_13809, RNA1509_14240} {RNA1310_44237.1, RNA1509_13809, RNA1509_14240} {RNA1509_13809, RNA1509_14240, RNA815_21943}
19. MligTC455_08633 45 0.93 Mlig455_012424

Neo: -

Age: -

Region-enriched R4: 6.767/0.01731

0.953 - - - 0.953 - - Mlig455_012424 {REF} {Length: 975} {TRANSSPLICED} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
20. MligTC455_49428 298 6.2 Mlig455_005078

Neo: Irradiation

Age: -

Region-enriched R5: 2.298/0.00000

0.953 - - - 0.953 - - Mlig455_005078 {REF} {Length: 3358} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=45.7]; Zinc finger, C2H2 type [PF00096.28, score=25.1]; C2H2-type zinc finger [PF13894.8, score=21.5]; Protein of unknown function (DUF2722) [PF10846.10, score=20.3]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=177, Expect=3e-48]} {RNA1509_19024} {RNA1310_8889} {RNA815_15557}
21. MligTC455_35522 1127 23.49 Mlig455_032860

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.244

AP3D1 0.952 - - - 0.952 - - Mlig455_032860 {REF} {Length: 6535} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=428.0]; AP-3 complex subunit delta-1 [PF06375.13, score=64.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=57.0]; HEAT repeats [PF13646.8, score=24.2]; HEAT repeat [PF02985.24, score=22.8]} {Human: ENSG00000065000, AP3D1, adaptor related protein complex 3 subunit delta 1, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000020198, Ap3d1, adaptor-related protein complex 3, delta 1 subunit, [RH, Score=951, Expect=0.0]} {Dmel: FBgn0001087, g, garnet, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00000162, apd-3, AP-3 complex subunit delta, [RH, Score=810, Expect=0.0]} {Smed: dd_Smed_v6_2534_0_1, dd_Smed_v6_2534_0_1, [RH, Score=892, Expect=0.0]} {RNA1509_2967} {RNA1310_1080.1} {RNA815_531.1}
22. MligTC455_43091 159 3.31 Mlig455_012706

Neo: -

Age: -

SPAST 0.951 - - - 0.951 - - Mlig455_012706 {REF} {Length: 3310} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=127.2]; AAA+ lid domain [PF17862.3, score=38.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=25.4]; AAA domain [PF13401.8, score=21.8]; TIP49 P-loop domain [PF06068.15, score=20.7]; IstB-like ATP binding protein [PF01695.19, score=20.2]; Bacterial TniB protein [PF05621.13, score=18.6]} {Human: ENSG00000021574, SPAST, spastin, [RH, Score=343, Expect=4e-113]} {Mouse: ENSMUSG00000024068, Spast, spastin, [RH, Score=339, Expect=2e-110]} {Dmel: FBgn0039141, spas, spastin, [RH, Score=327, Expect=8e-105]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [RH, Score=306, Expect=2e-99]} {Smed: dd_Smed_v6_7472_0_1, dd_Smed_v6_7472_0_1, [RH, Score=323, Expect=3e-105]} {RNA1509_31393, RNA1509_60086} {RNA1310_17702, RNA1509_31393, RNA1509_60086} {RNA1509_31393, RNA1509_60086, RNA815_24923}
23. MligTC455_43458 1260 26.25 Mlig455_063170

Neo: Irradiation

Age: logFC(26M/2M)=0.551

Region-enriched R5: 1.667/0.00315

THOC5 0.95 - - - 0.950 - - Mlig455_063170 {REF} {Length: 2647} {TRANSSPLICED} {Pfam: Fms-interacting protein/Thoc5 [PF09766.11, score=277.0]} {Human: ENSG00000100296, THOC5, THO complex 5, [RH, Score=148, Expect=9e-39]} {Mouse: ENSMUSG00000034274, Thoc5, THO complex 5, [RH, Score=148, Expect=1e-36]} {Dmel: FBgn0034939, thoc5, [RH, Score=126, Expect=5e-30]} {Celegans: WBGene00021311, thoc-5, [RH, Score=92.0, Expect=5e-19]} {Smed: dd_Smed_v6_4664_0_1, dd_Smed_v6_4664_0_1, [RH, Score=121, Expect=2e-28]} {RNA1509_4508} {RNA1310_7580} {RNA815_2461}
24. MligTC455_49751 1607 33.47 Mlig455_054100, Mlig455_054109

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.392

EXOSC3 0.95 - - - 0.950 - -

Mlig455_054100 {REF} {Length: 1934} {TRANSSPLICED} {Pfam: KH domain [PF15985.7, score=38.8]} {Human: ENSG00000107371, EXOSC3, exosome component 3, [RH, Score=140, Expect=3e-39]} {Mouse: ENSMUSG00000028322, Exosc3, exosome component 3, [RH, Score=137, Expect=3e-38]} {Dmel: FBgn0260648, Rrp40, Ribosomal RNA processing 40, [RH, Score=138, Expect=3e-39]} {Celegans: WBGene00010325, exos-3, EXOSome (Multiexonuclease complex) component, [RH, Score=117, Expect=2e-31]} {Smed: dd_Smed_v6_12345_0_1, dd_Smed_v6_12345_0_1, [RH, Score=100, Expect=1e-24]} {RNA1509_14817} {RNA1310_22285.1, RNA1509_14817} {RNA1509_14817, RNA815_10248}

Mlig455_054109 {REF} {Length: 1465} {Pfam: KH domain [PF15985.7, score=38.8]} {Human: ENSG00000107371, EXOSC3, exosome component 3, [RH, Score=140, Expect=3e-39]} {Mouse: ENSMUSG00000028322, Exosc3, exosome component 3, [RH, Score=137, Expect=3e-38]} {Dmel: FBgn0260648, Rrp40, Ribosomal RNA processing 40, [RH, Score=138, Expect=3e-39]} {Celegans: WBGene00010325, exos-3, EXOSome (Multiexonuclease complex) component, [RH, Score=117, Expect=2e-31]} {Smed: dd_Smed_v6_12345_0_1, dd_Smed_v6_12345_0_1, [RH, Score=100, Expect=1e-24]} {RNA1509_14817} {RNA1310_22285.1} {RNA815_10248}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA