Data search
Results for MligTC455_36682
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36682 | 1577 | 32.86 | Mlig455_059315 | Neo: - Age: - Region-enriched R4: 1.145/0.00582 |
Mlig455_059315 {REF} {Length: 959} {TRANSSPLICED} {RNA1509_18781, RNA1509_41099, RNA1509_54262} {RNA1310_29632, RNA1509_18781, RNA1509_41099, RNA1509_54262} {RNA1509_18781, RNA1509_41099, RNA1509_54262, RNA815_17983} |
Cumulative graph for MligTC455_36682
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.008 | 5.216 | 0.24204 | 0.88864 | |
| RegionR2 | -0.494 | 5.216 | 0.14204 | 0.46892 | |
| RegionR3 | 0.059 | 5.216 | 0.83017 | 1.00000 | |
| RegionR4 | 1.145 | 5.216 | 0.00048 | 0.00582 | |
| RegionR5 | 0.787 | 5.216 | 0.00180 | 0.01610 | |
| RegionR6 | 0.246 | 5.216 | 0.37935 | 0.95927 | |
| RegionR7 | 0.057 | 5.216 | 0.87128 | 1.00000 | |
| RegionR8 | -0.793 | 5.216 | 0.11639 | 0.62946 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.315 | 5.216 | 0.19368 | 0.93161 | |
| RegenerationR2 | 0.16 | 5.216 | 0.56331 | 0.90040 | |
| RegenerationR3 | -0.229 | 5.216 | 0.44748 | 0.83064 | |
| RegenerationR4 | -0.132 | 5.216 | 0.66502 | 0.94019 | |
| RegenerationR5 | -0.087 | 5.216 | 0.74997 | 0.97200 | |
| RegenerationR6 | 0.335 | 5.216 | 0.26486 | 0.61485 | |
| RegenerationBL | 0.516 | 5.216 | 0.13360 | 0.43536 | |
| RegenerationTP | 0.267 | 5.216 | 0.51854 | 0.91321 |
Genes with expression patterns similar to MligTC455_36682
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36682 | 1577 | 32.86 | Mlig455_059315 | Neo: - Age: - Region-enriched R4: 1.145/0.00582 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059315 {REF} {Length: 959} {TRANSSPLICED} {RNA1509_18781, RNA1509_41099, RNA1509_54262} {RNA1310_29632, RNA1509_18781, RNA1509_41099, RNA1509_54262} {RNA1509_18781, RNA1509_41099, RNA1509_54262, RNA815_17983} | |
| 2. | MligTC455_41381 | 1161 | 24.19 | Mlig455_057022 | Neo: - Age: - |
ATAD1 | 2.445 | 0.713 | - | 0.950 | - | 0.782 | - | Mlig455_057022 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=121.3]; AAA+ lid domain [PF17862.3, score=27.8]; AAA ATPase domain [PF13191.8, score=22.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=22.4]; Protein of unknown function (DUF815) [PF05673.15, score=20.7]} {Human: ENSG00000283024, ATAD1, ATPase family, AAA domain containing 1, [RH, Score=294, Expect=7e-97]; ENSG00000138138, ATAD1, ATPase family, AAA domain containing 1, [RH, Score=294, Expect=7e-97]} {Mouse: ENSMUSG00000013662, Atad1, ATPase family, AAA domain containing 1, [RH, Score=294, Expect=5e-97]} {Dmel: FBgn0005322, nmd, no mitochondrial derivative, [RH, Score=308, Expect=1e-102]} {Celegans: WBGene00010557, mspn-1, Mitochondrial sorting homolog, [RH, Score=268, Expect=1e-87]} {Smed: dd_Smed_v6_3468_0_1, dd_Smed_v6_3468_0_1, [RH, Score=257, Expect=1e-82]} {RNA1509_10594, RNA1509_55644} {RNA1310_16934, RNA1509_10594, RNA1509_55644} {RNA1509_10594, RNA1509_55644, RNA815_15950} |
| 3. | MligTC455_34500 | 3224 | 67.16 | Mlig455_029770, Mlig455_029924 | Neo: - Age: logFC(26M/2M)=0.194 |
NPLOC4 | 1.75 | - | - | - | 0.784 | 0.966 | - | Mlig455_029770 {REF} {Length: 3121} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=297.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=42.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=431, Expect=9e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=434, Expect=2e-145]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=398, Expect=3e-131]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=359, Expect=1e-117]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=421, Expect=3e-140]} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA1509_6797} {RNA1310_13992, RNA1509_24296, RNA1509_30091, RNA1509_32827} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA815_5567} Mlig455_029924 {REF} {Length: 3589} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=298.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=41.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=433, Expect=1e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=438, Expect=9e-147]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=402, Expect=9e-133]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=361, Expect=4e-118]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=427, Expect=2e-142]} {RNA1509_6797} {RNA1310_13992} {RNA815_5567} |
| 4. | MligTC455_28519 | 2242 | 46.7 | Mlig455_026337 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.226 Region-enriched R4: 1.066/0.01237 |
SEM1 | 1.685 | 0.731 | - | - | - | - | 0.954 | Mlig455_026337 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: DSS1/SEM1 family [PF05160.15, score=78.7]} {Human: ENSG00000127922, SEM1, SEM1, 26S proteasome complex subunit, [RH, Score=58.5, Expect=3e-12]} {Mouse: ENSMUSG00000042541, Sem1, SEM1, 26S proteasome complex subunit, [RH, Score=58.5, Expect=2e-12]} {Dmel: FBgn0266666, Sem1, Suppressor of exocyst mutations 1, [Score=48.9, Expect=1e-08]} {Celegans: WBGene00022492, dss-1, Probable 26S proteasome complex subunit dss-1, [Score=49.3, Expect=8e-09]} {Smed: dd_Smed_v6_1550_0_1, dd_Smed_v6_1550_0_1, [Score=69.7, Expect=7e-17]} {RNA1509_29008, RNA1509_48638, RNA1509_5698} {RNA1310_33997.1, RNA1509_29008, RNA1509_48638, RNA1509_5698} {RNA1509_29008, RNA1509_48638, RNA1509_5698, RNA815_15780.1} |
| 5. | MligTC455_21011 | 30 | 0.63 | Mlig455_043892 | Neo: - Age: - |
KREMEN1 | 0.979 | - | - | - | - | 0.979 | - | Mlig455_043892 {REF} {Length: 1488} {Pfam: WSC domain [PF01822.21, score=102.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=53.5, Expect=1e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=66.2, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=56.2, Expect=9e-09]} {RNA1509_22214} {RNA1310_95335} {RNA815_43018} |
| 6. | MligTC455_35855 | 36 | 0.74 | Mlig455_057980 | Neo: Irradiation Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_057980 {REF} {Length: 3238} {TRANSSPLICED} {RNA1509_13251} {RNA1310_8663, RNA1509_13251} {RNA1509_13251, RNA815_11077} | |
| 7. | MligTC455_35856 | 35 | 0.72 | Mlig455_070752 | Neo: - Age: Up-Down-Down |
0.964 | - | - | - | - | 0.964 | - | Mlig455_070752 {REF} {Length: 5912} {TRANSSPLICED} {RNA1509_13251} {RNA1310_4626} {RNA815_11077} | |
| 8. | MligTC455_27742 | 216 | 4.49 | Mlig455_020706 | Neo: Irradiation Age: - Region-enriched R2: 4.070/0.03422 |
TMED3 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_020706 {REF} {Length: 1854} {TRANSSPLICED} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=82.1]} {Human: ENSG00000166557, TMED3, transmembrane p24 trafficking protein 3, [Score=75.9, Expect=4e-15]; ENSG00000117500, TMED5, transmembrane p24 trafficking protein 5, [Score=73.9, Expect=2e-14]} {Mouse: ENSMUSG00000063406, Tmed5, transmembrane p24 trafficking protein 5, [Score=74.7, Expect=7e-15]; ENSMUSG00000032353, Tmed3, transmembrane p24 trafficking protein 3, [Score=73.9, Expect=1e-14]} {Dmel: FBgn0051787, CG31787, [Score=73.9, Expect=9e-15]} {Celegans: WBGene00010670, K08E4.6, [Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_3127_0_1, dd_Smed_v6_3127_0_1, [Score=84.7, Expect=4e-18]} {RNA1509_20798} {RNA1310_17461} {RNA815_5363} |
| 9. | MligTC455_22791 | 8103 | 168.82 | Mlig455_037099 | Neo: Int S/G2/M Age: Down-Up-Down |
HNRNPK | 0.957 | - | - | 0.957 | - | - | - | Mlig455_037099 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=155.3]; KH domain [PF07650.19, score=61.7]; KH domain [PF13083.8, score=20.5]} {Human: ENSG00000165119, HNRNPK, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=2e-45]} {Mouse: ENSMUSG00000021546, Hnrnpk, heterogeneous nuclear ribonucleoprotein K, [RH, Score=162, Expect=1e-46]} {Dmel: FBgn0267791, HnRNP-K, Heterogeneous nuclear ribonucleoprotein K, [RH, Score=151, Expect=3e-41]} {Celegans: WBGene00017816, hrpk-1, Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog, [RH, Score=213, Expect=1e-65]} {Smed: dd_Smed_v6_1569_0_1, dd_Smed_v6_1569_0_1, [RH, Score=206, Expect=3e-63]} {RNA1509_10759} {RNA1310_6557.1} {RNA815_5052.1} |
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