M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_36811

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36811 5077 105.77 Mlig455_009072, Mlig455_009087, Mlig455_058111

Neo: -

Age: -

 EIF4H

Mlig455_009072 {REF} {Length: 2686} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.0]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [Score=99.0, Expect=8e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [Score=101, Expect=6e-25]} {Dmel: FBgn0262734, eIF4H1, eukaryotic translation initiation factor 4H1, [Score=89.0, Expect=5e-20]} {Celegans: WBGene00011156, R09B3.3, [Score=47.0, Expect=6e-07]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=117, Expect=9e-31]} {RNA1509_59418} {RNA1310_23392.1} {RNA815_343.1}

Mlig455_009087 {REF} {Length: 2504} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.2]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [Score=102, Expect=7e-26]} {Dmel: FBgn0262734, eIF4H1, eukaryotic translation initiation factor 4H1, [Score=90.9, Expect=3e-21]} {Celegans: WBGene00011156, R09B3.3, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=117, Expect=2e-31]} {RNA1509_20638, RNA1509_42318} {RNA1310_23392.1, RNA1509_20638, RNA1509_42318} {RNA1509_20638, RNA1509_42318, RNA815_343.1}

Mlig455_058111 {REF} {Length: 2515} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.2]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [Score=99.4, Expect=2e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [Score=102, Expect=1e-25]} {Dmel: FBgn0262734, eIF4H1, eukaryotic translation initiation factor 4H1, [Score=89.7, Expect=1e-20]} {Celegans: WBGene00011156, R09B3.3, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=117, Expect=3e-31]} {RNA1509_20638, RNA1509_59418} {RNA1310_23392.1, RNA1509_59418} {RNA1509_59418, RNA815_343.1}

Cumulative graph for MligTC455_36811

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.028 6.855 0.96055 1.00000
RegionR2 -0.382 6.855 0.31013 0.70098
RegionR3 0.046 6.855 0.88391 1.00000
RegionR4 0.521 6.855 0.14117 0.38428
RegionR5 0.06 6.855 0.84309 1.00000
RegionR6 0.083 6.855 0.79238 1.00000
RegionR7 0.28 6.855 0.37839 1.00000
RegionR8 -0.58 6.855 0.13297 0.66734

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.505 6.855 0.06243 0.73556
RegenerationR2 -0.262 6.855 0.50758 0.87436
RegenerationR3 -0.143 6.855 0.72605 0.95649
RegenerationR4 0.084 6.855 0.84035 1.00000
RegenerationR5 0.157 6.855 0.69384 0.94942
RegenerationR6 -0.123 6.855 0.75461 0.95437
RegenerationBL -0.153 6.855 0.67747 1.00000
RegenerationTP -0.603 6.855 0.13651 0.55401


Genes with expression patterns similar to MligTC455_36811

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36811 5077 105.77 Mlig455_009072, Mlig455_009087, Mlig455_058111

Neo: -

Age: -

 EIF4H 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_009072 {REF} {Length: 2686} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.0]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [Score=99.0, Expect=8e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [Score=101, Expect=6e-25]} {Dmel: FBgn0262734, eIF4H1, eukaryotic translation initiation factor 4H1, [Score=89.0, Expect=5e-20]} {Celegans: WBGene00011156, R09B3.3, [Score=47.0, Expect=6e-07]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=117, Expect=9e-31]} {RNA1509_59418} {RNA1310_23392.1} {RNA815_343.1}

Mlig455_009087 {REF} {Length: 2504} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.2]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [Score=102, Expect=7e-26]} {Dmel: FBgn0262734, eIF4H1, eukaryotic translation initiation factor 4H1, [Score=90.9, Expect=3e-21]} {Celegans: WBGene00011156, R09B3.3, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=117, Expect=2e-31]} {RNA1509_20638, RNA1509_42318} {RNA1310_23392.1, RNA1509_20638, RNA1509_42318} {RNA1509_20638, RNA1509_42318, RNA815_343.1}

Mlig455_058111 {REF} {Length: 2515} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.2]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [Score=99.4, Expect=2e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [Score=102, Expect=1e-25]} {Dmel: FBgn0262734, eIF4H1, eukaryotic translation initiation factor 4H1, [Score=89.7, Expect=1e-20]} {Celegans: WBGene00011156, R09B3.3, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=117, Expect=3e-31]} {RNA1509_20638, RNA1509_59418} {RNA1310_23392.1, RNA1509_59418} {RNA1509_59418, RNA815_343.1}
2. MligTC455_24290 617 12.85 Mlig455_004537, Mlig455_028539

Neo: -

Age: -

 NFYB 1.728 - - - 0.770 - 0.958

Mlig455_004537 {REF} {Length: 2183} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.4]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=157, Expect=2e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=157, Expect=1e-48]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=139, Expect=3e-42]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=125, Expect=8e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=160, Expect=6e-50]} {RNA1509_13566, RNA1509_32024} {RNA1310_44394, RNA1509_32024} {RNA1509_32024, RNA815_16021}

Mlig455_028539 {REF} {Length: 2185} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.4]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=157, Expect=2e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=157, Expect=1e-48]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=139, Expect=3e-42]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=125, Expect=8e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=160, Expect=6e-50]} {RNA1509_13566} {RNA1310_44394, RNA1509_13566} {RNA1509_13566, RNA815_16021}
3. MligTC455_25266 1293 26.93 Mlig455_058082

Neo: -

Age: logFC(26M/2M)=0.494

Region-enriched R4: 1.940/0.00065

 VPS37B 1.716 - - 0.753 - - 0.963 Mlig455_058082 {REF} {Length: 1292} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=81.6]} {Human: ENSG00000139722, VPS37B, VPS37B, ESCRT-I subunit, [RH, Score=78.6, Expect=1e-16]} {Mouse: ENSMUSG00000048832, Vps37c, vacuolar protein sorting 37C, [RH, Score=66.2, Expect=3e-12]; ENSMUSG00000066278, Vps37b, vacuolar protein sorting 37B, [RH, Score=65.5, Expect=4e-12]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [Score=55.1, Expect=6e-09]} {RNA1509_20495, RNA1509_35491, RNA1509_40503, RNA1509_4762} {RNA1310_1499.1, RNA1509_20495, RNA1509_35491, RNA1509_40503, RNA1509_4762} {RNA1509_20495, RNA1509_35491, RNA1509_40503, RNA1509_4762, RNA815_9957}
4. MligTC455_25265 1284 26.74 Mlig455_058038

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.082

Region-enriched R4: 1.930/0.00051
Region-enriched R5: 1.049/0.03707

 VPS37B 1.707 - - 0.742 - - 0.965 Mlig455_058038 {REF} {Length: 1303} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=81.6]} {Human: ENSG00000139722, VPS37B, VPS37B, ESCRT-I subunit, [RH, Score=79.3, Expect=6e-17]} {Mouse: ENSMUSG00000048832, Vps37c, vacuolar protein sorting 37C, [RH, Score=67.4, Expect=1e-12]; ENSMUSG00000066278, Vps37b, vacuolar protein sorting 37B, [RH, Score=65.9, Expect=2e-12]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [Score=55.5, Expect=4e-09]} {RNA1509_4762} {RNA1310_1499.1} {RNA815_9957}
5. MligTC455_32608 378 7.88 Mlig455_047029

Neo: -

Age: -

 CSTF3 1.678 - - - - 0.726 0.952 Mlig455_047029 {REF} {Length: 3606} {TRANSSPLICED} {Pfam: Suppressor of forked protein (Suf) [PF05843.16, score=264.1]} {Human: ENSG00000176102, CSTF3, cleavage stimulation factor subunit 3, [RH, Score=817, Expect=0.0]} {Mouse: ENSMUSG00000027176, Cstf3, cleavage stimulation factor, 3' pre-RNA, subunit 3, [RH, Score=817, Expect=0.0]} {Dmel: FBgn0003559, su(f), suppressor of forked, [RH, Score=741, Expect=0.0]} {Celegans: WBGene00006307, suf-1, SUppressor-of-Forked (Drosophila) homolog, [RH, Score=634, Expect=0.0]} {Smed: dd_Smed_v6_2751_0_1, dd_Smed_v6_2751_0_1, [RH, Score=852, Expect=0.0]} {RNA1509_46620, RNA1509_51439, RNA1509_6273} {RNA1310_9060, RNA1509_46620, RNA1509_51439} {RNA1509_46620, RNA1509_51439, RNA815_6112}
6. MligTC455_46208 626 13.03 Mlig455_033857

Neo: -

Age: -

 PGM2 0.968 - - - - - 0.968 Mlig455_033857 {REF} {Length: 2753} {TRANSSPLICED} {Pfam: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I [PF02878.18, score=138.7]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II [PF02879.18, score=83.8]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III [PF02880.18, score=49.9]} {Human: ENSG00000169299, PGM2, phosphoglucomutase 2, [RH, Score=526, Expect=1e-180]} {Mouse: ENSMUSG00000029171, Pgm2, phosphoglucomutase 2, [RH, Score=520, Expect=2e-178]; ENSMUSG00000030729, Pgm2l1, phosphoglucomutase 2-like 1, [RH, Score=501, Expect=3e-171]} {Dmel: FBgn0033377, Pmm45A, Phosphomannomutase 45A, [RH, Score=472, Expect=9e-160]} {Celegans: WBGene00012803, Y43F4B.5, [RH, Score=459, Expect=2e-155]} {Smed: dd_Smed_v6_4058_0_1, dd_Smed_v6_4058_0_1, [RH, Score=496, Expect=5e-170]} {RNA1509_52307, RNA1509_7220} {RNA1310_13819, RNA1509_52307, RNA1509_7220} {RNA1509_52307, RNA1509_7220, RNA815_2808}
7. MligTC455_31190 1874 39.05 Mlig455_015279

Neo: -

Age: logFC(26M/2M)=0.340

 SERP2 0.966 - - - - - 0.966 Mlig455_015279 {REF} {Length: 2207} {TRANSSPLICED} {Pfam: Ribosome associated membrane protein RAMP4 [PF06624.14, score=92.7]} {Human: ENSG00000151778, SERP2, stress associated endoplasmic reticulum protein family member 2, [RH, Score=92.4, Expect=2e-26]} {Mouse: ENSMUSG00000052584, Serp2, stress-associated endoplasmic reticulum protein family member 2, [RH, Score=92.4, Expect=1e-26]} {Dmel: FBgn0047135, CG32276, [RH, Score=94.7, Expect=1e-27]} {Celegans: WBGene00010337, F59F4.2, [RH, Score=91.3, Expect=2e-26]} {Smed: dd_Smed_v6_304_0_1, dd_Smed_v6_304_0_1, [RH, Score=111, Expect=2e-34]} {RNA1509_10416, RNA1509_15112, RNA1509_18965, RNA1509_31640, RNA1509_58541} {RNA1310_26893.1, RNA1509_10416, RNA1509_15112, RNA1509_18965, RNA1509_31640, RNA1509_58541} {RNA1509_10416, RNA1509_15112, RNA1509_18965, RNA1509_31640, RNA1509_58541, RNA815_13675.1}
8. MligTC455_45733 1864 38.84 Mlig455_007757, Mlig455_056602

Neo: -

Age: -

Region-enriched R4: 1.410/0.00362

 GALNT1, GALNT13 0.966 - - - - - 0.966

Mlig455_007757 {REF} {Length: 3891} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=114.4]; Ricin-type beta-trefoil lectin domain [PF00652.24, score=98.0]; Glycosyltransferase like family 2 [PF13641.8, score=26.9]; N-terminal domain of galactosyltransferase [PF02709.16, score=22.0]} {Human: ENSG00000141429, GALNT1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=467, Expect=9e-158]; ENSG00000144278, GALNT13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=459, Expect=8e-155]} {Mouse: ENSMUSG00000000420, Galnt1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=466, Expect=9e-158]; ENSMUSG00000060988, Galnt13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=460, Expect=2e-155]} {Dmel: FBgn0050463, CG30463, [RH, Score=597, Expect=0.0]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [RH, Score=634, Expect=0.0]} {Smed: dd_Smed_v6_4615_0_1, dd_Smed_v6_4615_0_1, [RH, Score=647, Expect=0.0]} {RNA1509_8236} {RNA1310_11964, RNA1509_8236} {RNA1509_8236, RNA815_4139.1}

Mlig455_056602 {REF} {Length: 5065} {Pfam: Ricin-type beta-trefoil lectin domain [PF00652.24, score=99.0]; Glycosyl transferase family 2 [PF00535.28, score=62.5]; N-terminal domain of galactosyltransferase [PF02709.16, score=22.9]} {Human: ENSG00000144278, GALNT13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=347, Expect=4e-115]; ENSG00000141429, GALNT1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=345, Expect=3e-114]; ENSG00000259075, POC1B-GALNT4, POC1B-GALNT4 readthrough, [Score=344, Expect=1e-113]; ENSG00000257594, GALNT4, polypeptide N-acetylgalactosaminyltransferase 4, [Score=343, Expect=4e-113]; ENSG00000119514, GALNT12, polypeptide N-acetylgalactosaminyltransferase 12, [Score=333, Expect=2e-109]} {Mouse: ENSMUSG00000060988, Galnt13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=348, Expect=1e-115]; ENSMUSG00000000420, Galnt1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=345, Expect=3e-114]; ENSMUSG00000090035, Galnt4, polypeptide N-acetylgalactosaminyltransferase 4, [Score=336, Expect=1e-110]; ENSMUSG00000039774, Galnt12, polypeptide N-acetylgalactosaminyltransferase 12, [Score=332, Expect=3e-109]} {Dmel: FBgn0050463, CG30463, [Score=458, Expect=1e-157]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=481, Expect=4e-167]} {Smed: dd_Smed_v6_4615_0_1, dd_Smed_v6_4615_0_1, [Score=504, Expect=4e-176]} {RNA1509_8236} {RNA1310_18605} {RNA815_7430.1}
9. MligTC455_25024 713 14.85 Mlig455_043194

Neo: -

Age: Up-Down-Up

 TSC2 0.965 - - - - - 0.965 Mlig455_043194 {REF} {Length: 5800} {Pfam: Domain of unknown function (DUF3384) [PF11864.10, score=59.5]; Rap/ran-GAP [PF02145.17, score=46.1]; Tuberin [PF03542.18, score=38.1]} {Human: ENSG00000103197, TSC2, TSC complex subunit 2, [Score=95.1, Expect=6e-19]} {Mouse: ENSMUSG00000002496, Tsc2, tuberous sclerosis 2, [Score=87.8, Expect=8e-17]} {Dmel: FBgn0005198, gig, gigas, [RH, Score=90.5, Expect=9e-18]} {Celegans: WBGene00018734, F53A10.2, Rap1GAP, [Score=59.7, Expect=1e-08]} {RNA1509_55366} {RNA1310_1230.2} {RNA815_7005}
10. MligTC455_35099 2100 43.74 Mlig455_018503

Neo: -

Age: Down-Down-Up

 FKBP2 0.964 - - - - - 0.964 Mlig455_018503 {REF} {Length: 1379} {TRANSSPLICED} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=117.7]} {Human: ENSG00000173486, FKBP2, FK506 binding protein 2, [RH, Score=165, Expect=1e-52]} {Mouse: ENSMUSG00000056629, Fkbp2, FK506 binding protein 2, [RH, Score=166, Expect=3e-53]} {Dmel: FBgn0010470, Fkbp14, FK506-binding protein 14, [RH, Score=137, Expect=4e-41]} {Celegans: WBGene00001426, fkb-1, Peptidylprolyl isomerase, [RH, Score=163, Expect=2e-52]} {Smed: dd_Smed_v6_1536_0_1, dd_Smed_v6_1536_0_1, [RH, Score=173, Expect=2e-56]} {RNA1509_27564} {RNA1310_35669.1, RNA1509_27564} {RNA1509_27564, RNA815_16576}
11. MligTC455_50713 1646 34.29 Mlig455_004991

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.627

Region-enriched R5: 1.244/0.00002
Region-enriched R4: 1.149/0.00387

 MAP1LC3C 0.959 - - - - - 0.959 Mlig455_004991 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=130.5]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=20.0]} {Human: ENSG00000197769, MAP1LC3C, microtubule associated protein 1 light chain 3 gamma, [Score=150, Expect=4e-47]} {Mouse: ENSMUSG00000031812, Map1lc3b, microtubule-associated protein 1 light chain 3 beta, [Score=125, Expect=6e-38]; ENSMUSG00000027602, Map1lc3a, microtubule-associated protein 1 light chain 3 alpha, [Score=122, Expect=9e-37]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=98.6, Expect=2e-27]} {Celegans: WBGene00002981, lgg-2, [RH, Score=107, Expect=8e-31]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [Score=104, Expect=9e-30]} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1310_32049.1, RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101, RNA815_14707}
12. MligTC455_11918 699 14.55 Mlig455_036173

Neo: -

Age: -

 ZDHHC2 0.958 - - - - - 0.958 Mlig455_036173 {REF} {Length: 2240} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=114.2]} {Human: ENSG00000104219, ZDHHC2, zinc finger DHHC-type containing 2, [RH, Score=288, Expect=8e-95]} {Mouse: ENSMUSG00000039470, Zdhhc2, zinc finger, DHHC domain containing 2, [RH, Score=290, Expect=6e-96]} {Dmel: FBgn0033474, CG1407, [RH, Score=275, Expect=2e-89]} {Celegans: WBGene00014075, dhhc-4, Zinc finger DHHC domain-containing protein 4, [RH, Score=204, Expect=2e-62]} {Smed: dd_Smed_v6_6233_0_1, dd_Smed_v6_6233_0_1, [RH, Score=259, Expect=4e-85]} {RNA1509_7705} {RNA1310_6792.1} {RNA815_2390.1}
13. MligTC455_15616 879 18.31 Mlig455_001922

Neo: -

Age: -

 LEPROTL1 0.955 - - - - - 0.955 Mlig455_001922 {REF} {Length: 3020} {TRANSSPLICED} {Pfam: Vacuolar protein sorting 55 [PF04133.16, score=123.9]} {Human: ENSG00000104660, LEPROTL1, leptin receptor overlapping transcript like 1, [RH, Score=151, Expect=8e-48]; ENSG00000213625, LEPROT, leptin receptor overlapping transcript, [RH, Score=147, Expect=3e-46]} {Mouse: ENSMUSG00000035212, Leprot, leptin receptor overlapping transcript, [RH, Score=153, Expect=7e-49]; ENSMUSG00000031513, Leprotl1, leptin receptor overlapping transcript-like 1, [RH, Score=151, Expect=7e-48]} {Dmel: FBgn0050423, CG30423, [RH, Score=82.0, Expect=8e-21]} {Celegans: WBGene00016244, C30B5.2, Vacuolar protein sorting-associated protein 55 homolog, [RH, Score=122, Expect=1e-36]} {Smed: dd_Smed_v6_7026_0_1, dd_Smed_v6_7026_0_1, [RH, Score=144, Expect=2e-45]} {RNA1509_43244} {RNA1310_15087.1} {RNA815_20068}
14. MligTC455_24809 537 11.19 Mlig455_003129

Neo: -

Age: -

 SLC11A2 0.954 - - - - - 0.954 Mlig455_003129 {REF} {Length: 3341} {Pfam: Natural resistance-associated macrophage protein [PF01566.20, score=389.1]} {Human: ENSG00000110911, SLC11A2, solute carrier family 11 member 2, [RH, Score=595, Expect=0.0]; ENSG00000018280, SLC11A1, solute carrier family 11 member 1, [RH, Score=570, Expect=0.0]} {Mouse: ENSMUSG00000023030, Slc11a2, solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2, [RH, Score=622, Expect=0.0]} {Dmel: FBgn0011672, Mvl, Malvolio, [RH, Score=617, Expect=0.0]} {Celegans: WBGene00004876, smf-1, NRAMP-like transporter smf-1, [RH, Score=548, Expect=0.0]} {Smed: dd_Smed_v6_4739_0_1, dd_Smed_v6_4739_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_10227} {RNA1310_10668.1} {RNA815_4424.1}
15. MligTC455_53223 1757 36.59 Mlig455_018662, Mlig455_018864

Neo: -

Age: -

 AC118553.2 0.954 - - - - - 0.954

Mlig455_018662 {REF} {Length: 3551} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.8]; MFS_1 like family [PF12832.9, score=37.9]} {Human: ENSG00000283761, AC118553.2, novel protein, [RH, Score=536, Expect=0.0]; ENSG00000156875, MFSD14A, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSG00000148110, MFSD14B, major facilitator superfamily domain containing 14B, [RH, Score=525, Expect=0.0]} {Mouse: ENSMUSG00000089911, Mfsd14a, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSMUSG00000038212, Mfsd14b, major facilitator superfamily domain containing 14B, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0035400, CG11537, [RH, Score=514, Expect=1e-176]} {Celegans: WBGene00020798, T25D3.4, [RH, Score=478, Expect=2e-164]} {Smed: dd_Smed_v6_5693_0_1, dd_Smed_v6_5693_0_1, [RH, Score=597, Expect=0.0]} {RNA1509_4109} {RNA1310_7829} {RNA815_2618}

Mlig455_018864 {REF} {Length: 3544} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.3]; MFS_1 like family [PF12832.9, score=37.8]} {Human: ENSG00000283761, AC118553.2, novel protein, [RH, Score=536, Expect=0.0]; ENSG00000156875, MFSD14A, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSG00000148110, MFSD14B, major facilitator superfamily domain containing 14B, [RH, Score=525, Expect=0.0]} {Mouse: ENSMUSG00000089911, Mfsd14a, major facilitator superfamily domain containing 14A, [RH, Score=534, Expect=0.0]; ENSMUSG00000038212, Mfsd14b, major facilitator superfamily domain containing 14B, [RH, Score=527, Expect=0.0]} {Dmel: FBgn0035400, CG11537, [RH, Score=510, Expect=3e-175]} {Celegans: WBGene00020798, T25D3.4, [RH, Score=478, Expect=2e-164]} {Smed: dd_Smed_v6_5693_0_1, dd_Smed_v6_5693_0_1, [RH, Score=602, Expect=0.0]} {RNA1509_25144, RNA1509_4109, RNA1509_46122} {RNA1310_7829, RNA1509_25144, RNA1509_4109, RNA1509_46122} {RNA1509_25144, RNA1509_4109, RNA1509_46122, RNA815_2618}
16. MligTC455_35100 2141 44.6 Mlig455_065163

Neo: Int S/G2/M

Age: -

 FKBP2 0.953 - - - - - 0.953 Mlig455_065163 {REF} {Length: 1620} {TRANSSPLICED} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=120.9]} {Human: ENSG00000173486, FKBP2, FK506 binding protein 2, [RH, Score=164, Expect=2e-52]} {Mouse: ENSMUSG00000056629, Fkbp2, FK506 binding protein 2, [RH, Score=166, Expect=3e-53]} {Dmel: FBgn0010470, Fkbp14, FK506-binding protein 14, [RH, Score=137, Expect=3e-41]} {Celegans: WBGene00001426, fkb-1, Peptidylprolyl isomerase, [RH, Score=162, Expect=3e-52]} {Smed: dd_Smed_v6_1536_0_1, dd_Smed_v6_1536_0_1, [RH, Score=176, Expect=9e-58]} {RNA1509_46806, RNA1509_5393} {RNA1310_35669.1, RNA1509_46806, RNA1509_5393} {RNA1509_46806, RNA1509_5393, RNA815_16576}
17. MligTC455_25468 835 17.4 Mlig455_059894

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 1.400/0.01794

 PNKP 0.952 - - - - - 0.952 Mlig455_059894 {REF} {Length: 3283} {Pfam: AAA domain [PF13671.8, score=41.5]; Chromatin associated protein KTI12 [PF08433.12, score=30.2]; Polynucleotide kinase 3 phosphatase [PF08645.13, score=24.0]; AAA ATPase domain [PF13191.8, score=23.8]} {Human: ENSG00000039650, PNKP, polynucleotide kinase 3'-phosphatase, [Score=144, Expect=2e-39]} {Mouse: ENSMUSG00000002963, Pnkp, polynucleotide kinase 3'- phosphatase, [Score=140, Expect=5e-38]} {Dmel: FBgn0037578, CG9601, [Score=132, Expect=7e-35]} {Celegans: WBGene00009010, F21D5.5, [Score=164, Expect=9e-48]} {Smed: dd_Smed_v6_1211_0_2, dd_Smed_v6_1211_0_2, [Score=146, Expect=9e-41]} {RNA1509_29141, RNA1509_38859} {RNA1310_5154.1, RNA1509_29141} {RNA1509_29141, RNA815_12031}
18. MligTC455_29579 4212 87.76 Mlig455_063430, Mlig455_066644

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.153

 SGTA 0.952 - - - - - 0.952

Mlig455_063430 {REF} {Length: 2785} {Pfam: Tetratricopeptide repeat [PF00515.30, score=71.2]; Tetratricopeptide repeat [PF07719.19, score=53.2]; Tetratricopeptide repeat [PF13181.8, score=46.4]; Tetratricopeptide repeat [PF13428.8, score=39.5]; Tetratricopeptide repeat [PF13431.8, score=36.8]; Tetratricopeptide repeat [PF13176.8, score=34.9]; TPR repeat [PF13414.8, score=34.9]; Homodimerisation domain of SGTA [PF16546.7, score=33.4]; Tetratricopeptide repeat [PF14559.8, score=31.3]; Tetratricopeptide repeat [PF13424.8, score=30.5]; Tetratricopeptide repeat [PF13432.8, score=25.9]; Tetratricopeptide repeat [PF13371.8, score=24.3]; Tetratricopeptide repeat [PF13374.8, score=23.6]; Tetratricopeptide repeat [PF13429.8, score=22.4]} {Human: ENSG00000104969, SGTA, small glutamine rich tetratricopeptide repeat containing alpha, [RH, Score=203, Expect=2e-62]} {Mouse: ENSMUSG00000004937, Sgta, small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha, [RH, Score=199, Expect=5e-61]} {Dmel: FBgn0032640, Sgt, small glutamine-rich tetratricopeptide containing protein, [RH, Score=129, Expect=4e-34]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [RH, Score=154, Expect=9e-44]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [RH, Score=152, Expect=5e-43]} {RNA1509_14064, RNA1509_18904, RNA1509_25239, RNA1509_27623, RNA1509_32386, RNA1509_4447} {RNA1310_10307.1, RNA1509_14064, RNA1509_18904, RNA1509_25239, RNA1509_27623, RNA1509_32386, RNA1509_4447} {RNA1509_14064, RNA1509_18904, RNA1509_25239, RNA1509_27623, RNA1509_32386, RNA1509_4447, RNA815_7123}

Mlig455_066644 {REF} {Length: 2551} {Pfam: Tetratricopeptide repeat [PF00515.30, score=71.2]; Tetratricopeptide repeat [PF07719.19, score=53.2]; Tetratricopeptide repeat [PF13181.8, score=46.4]; Tetratricopeptide repeat [PF13428.8, score=39.6]; Tetratricopeptide repeat [PF13431.8, score=36.8]; Tetratricopeptide repeat [PF13176.8, score=34.9]; TPR repeat [PF13414.8, score=34.9]; Homodimerisation domain of SGTA [PF16546.7, score=32.8]; Tetratricopeptide repeat [PF14559.8, score=31.5]; Tetratricopeptide repeat [PF13424.8, score=30.7]; Tetratricopeptide repeat [PF13371.8, score=25.2]; Tetratricopeptide repeat [PF13432.8, score=24.6]; Tetratricopeptide repeat [PF13374.8, score=23.6]; Tetratricopeptide repeat [PF13429.8, score=22.4]} {Human: ENSG00000104969, SGTA, small glutamine rich tetratricopeptide repeat containing alpha, [RH, Score=202, Expect=4e-62]} {Mouse: ENSMUSG00000004937, Sgta, small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha, [RH, Score=199, Expect=8e-61]} {Dmel: FBgn0032640, Sgt, small glutamine-rich tetratricopeptide containing protein, [RH, Score=127, Expect=2e-33]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [RH, Score=153, Expect=2e-43]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [RH, Score=155, Expect=4e-44]} {RNA1509_18904} {RNA1310_10307.1} {RNA815_7123}
19. MligTC455_45732 879 18.3 Mlig455_056580

Neo: -

Age: -

Region-enriched R4: 1.446/0.00739

 GALNT1 0.952 - - - - - 0.952 Mlig455_056580 {REF} {Length: 3816} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=114.4]; Ricin-type beta-trefoil lectin domain [PF00652.24, score=97.9]; Glycosyltransferase like family 2 [PF13641.8, score=27.0]; N-terminal domain of galactosyltransferase [PF02709.16, score=22.1]} {Human: ENSG00000141429, GALNT1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=466, Expect=7e-158]; ENSG00000144278, GALNT13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=458, Expect=1e-154]} {Mouse: ENSMUSG00000000420, Galnt1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=466, Expect=4e-158]; ENSMUSG00000060988, Galnt13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=459, Expect=2e-155]} {Dmel: FBgn0050463, CG30463, [RH, Score=590, Expect=0.0]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [RH, Score=632, Expect=0.0]} {Smed: dd_Smed_v6_4615_0_1, dd_Smed_v6_4615_0_1, [RH, Score=642, Expect=0.0]} {RNA1509_8236} {RNA1310_12402} {RNA815_4139.1}
20. MligTC455_40200 1027 21.4 Mlig455_009546, Mlig455_061942

Neo: -

Age: -

 ANK2, ANK3 0.951 - - - - - 0.951

Mlig455_009546 {REF} {Length: 2330} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=130.8]; Ankyrin repeat [PF13606.8, score=91.0]; Ankyrin repeats (many copies) [PF13857.8, score=89.1]; Ankyrin repeats (many copies) [PF13637.8, score=77.4]; Ankyrin repeat [PF00023.32, score=72.3]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=95.9, Expect=2e-19]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=94.0, Expect=4e-19]; ENSG00000145362, ANK2, ankyrin 2, [Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=95.5, Expect=1e-19]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=92.4, Expect=9e-19]} {Dmel: FBgn0261554, CG42672, [Score=90.5, Expect=2e-18]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_16235_0_1, dd_Smed_v6_16235_0_1, [RH, Score=130, Expect=2e-31]} {RNA1509_15676, RNA1509_30352, RNA1509_45516} {RNA1310_10189, RNA1509_15676, RNA1509_30352, RNA1509_45516} {RNA1509_15676, RNA1509_30352, RNA1509_45516, RNA815_5312}

Mlig455_061942 {REF} {Length: 2183} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=92.4]; Ankyrin repeat [PF13606.8, score=75.8]; Ankyrin repeats (many copies) [PF13857.8, score=62.8]; Ankyrin repeat [PF00023.32, score=55.7]; Ankyrin repeats (many copies) [PF13637.8, score=49.3]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=69.7, Expect=1e-11]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=67.8, Expect=2e-11]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=65.9, Expect=1e-10]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=65.9, Expect=2e-10]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=68.9, Expect=1e-11]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=59.3, Expect=8e-09]} {Smed: dd_Smed_v6_16235_0_1, dd_Smed_v6_16235_0_1, [Score=80.5, Expect=1e-15]} {RNA1509_45516} {RNA1310_10189} {RNA815_5312}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA