TomoSeq data search

Data search

Results for MligTC455_36850

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36850

102

2.12

Mlig455_061130

Neo: -

Age: -

RHBDF2

Mlig455_061130 {REF} {Length: 6350} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=74.1]} {Human: ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [RH, Score=362, Expect=7e-112]; ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [RH, Score=360, Expect=5e-111]} {Mouse: ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [RH, Score=366, Expect=1e-113]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [RH, Score=309, Expect=2e-89]} {Celegans: WBGene00004403, rom-4, Rhomboid-like protein, [RH, Score=313, Expect=2e-91]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [RH, Score=410, Expect=3e-132]} {RNA1509_18207} {RNA1310_7108} {RNA815_9193}

Cumulative graph for MligTC455_36850

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.819	2.058	1.00000	1.00000
RegionR2	2.804	2.058	0.01349	0.12163
RegionR3	1.627	2.058	0.12876	0.61694
RegionR4	1.134	2.058	0.33038	0.64857
RegionR5	1.337	2.058	0.19736	0.48589
RegionR6	1.171	2.058	0.30662	0.89781
RegionR7	1.132	2.058	0.40875	1.00000
RegionR8	-4.386	2.058	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.045	2.058	0.99987	1.00000
RegenerationR2	-0.528	2.058	0.40786	0.81846
RegenerationR3	0.692	2.058	0.33779	0.76217
RegenerationR4	-0.118	2.058	0.88551	1.00000
RegenerationR5	-0.089	2.058	0.89816	1.00000
RegenerationR6	0.111	2.058	0.90126	1.00000
RegenerationBL	2.282	2.058	0.15454	0.47027
RegenerationTP	3.634	2.058	0.04225	0.34098

Genes with expression patterns similar to MligTC455_36850

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36850	102	2.12	Mlig455_061130	Neo: - Age: -	RHBDF2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061130 {REF} {Length: 6350} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=74.1]} {Human: ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [RH, Score=362, Expect=7e-112]; ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [RH, Score=360, Expect=5e-111]} {Mouse: ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [RH, Score=366, Expect=1e-113]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [RH, Score=309, Expect=2e-89]} {Celegans: WBGene00004403, rom-4, Rhomboid-like protein, [RH, Score=313, Expect=2e-91]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [RH, Score=410, Expect=3e-132]} {RNA1509_18207} {RNA1310_7108} {RNA815_9193}
2.	MligTC455_36849	180	3.74	Mlig455_011306	Neo: - Age: Down-Up-Down Region-enriched R5: 2.410/0.02392	RHBDF2	3.456	0.796	0.936	-	-	0.957	0.767	Mlig455_011306 {REF} {Length: 4437} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=74.1]} {Human: ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [RH, Score=362, Expect=7e-112]; ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [RH, Score=360, Expect=5e-111]} {Mouse: ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [RH, Score=366, Expect=1e-113]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [RH, Score=309, Expect=2e-89]} {Celegans: WBGene00004403, rom-4, Rhomboid-like protein, [RH, Score=313, Expect=2e-91]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [RH, Score=410, Expect=3e-132]} {RNA1509_18207} {RNA1310_7108, RNA1509_18207} {RNA1509_18207, RNA815_9193}
3.	MligTC455_38046	448	9.33	Mlig455_032350, Mlig455_032409	Neo: - Age: -		0.979	-	-	-	-	-	0.979	Mlig455_032350 {REF} {Length: 2247} {Pfam: Hyaluronan mediated motility receptor N-terminal [PF15905.7, score=18.5]} {RNA1509_29743} {RNA1310_11310.1, RNA1509_29743} {RNA1509_29743, RNA815_3940} Mlig455_032409 {REF} {Length: 1688} {RNA1509_29743} {RNA1310_11310.1} {RNA815_3940}
4.	MligTC455_45237	281	5.85	Mlig455_023666	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_023666 {REF} {Length: 3778} {RNA1509_56313} {RNA1310_32456} {RNA815_14695.1}
5.	MligTC455_46109	27	0.56	Mlig455_015554	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_015554 {REF} {Length: 2498} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.8]} {Celegans: WBGene00019445, frpr-12, FMRFamide Peptide Receptor family, [Score=48.9, Expect=4e-06]} {Smed: dd_Smed_v6_21110_0_1, dd_Smed_v6_21110_0_1, [Score=202, Expect=1e-60]} {RNA1310_42800} {RNA815_34794}
6.	MligTC455_38002	38	0.8	Mlig455_021320	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_021320 {REF} {Length: 1286} {RNA1509_41055} {RNA1310_56949} {RNA815_35774}
7.	MligTC455_49944	108	2.25	Mlig455_067437	Neo: - Age: logFC(26M/2M)=-0.477 Region-enriched R4: 2.865/0.02691	GSTP1	0.961	-	-	-	-	-	0.961	Mlig455_067437 {REF} {Length: 1036} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=66.1]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=21.1]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=66.2, Expect=9e-13]} {Mouse: ENSMUSG00000097663, Gstp3, glutathione S-transferase pi 3, [Score=56.2, Expect=3e-09]; ENSMUSG00000058216, Gstp3, glutathione S-transferase pi 3, [Score=56.2, Expect=3e-09]; ENSMUSG00000068762, Gstm6, glutathione S-transferase, mu 6, [Score=55.8, Expect=4e-09]} {Celegans: WBGene00001762, gst-14, Glutathione S-Transferase, [Score=64.7, Expect=1e-12]} {RNA1509_34951} {RNA1310_12535} {RNA815_15521.1}
8.	MligTC455_32912	187	3.89	Mlig455_022604	Neo: - Age: - Region-enriched R4: 2.525/0.00995		0.959	-	-	-	-	-	0.959	Mlig455_022604 {REF} {Length: 2711} {tRNA: Lys(CTT),pseudo, score=24.8} {Smed: dd_Smed_v6_8694_0_1, dd_Smed_v6_8694_0_1, [Score=47.0, Expect=9e-07]} {RNA1509_54756} {RNA1310_15352} {RNA815_19591}
9.	MligTC455_20241	106	2.21	Mlig455_064205	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.589		0.958	-	-	-	-	0.958	-	Mlig455_064205 {REF} {Length: 1849} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=62.8, Expect=2e-11]} {RNA1509_7841} {RNA1310_18810} {RNA815_3607}
10.	MligTC455_20531	109	2.28	Mlig455_017914	Neo: - Age: Down-Up-Down	CREBZF	0.958	-	-	-	-	-	0.958	Mlig455_017914 {REF} {Length: 3273} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=20.1]} {Human: ENSG00000137504, CREBZF, CREB/ATF bZIP transcription factor, [RH, Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000051451, Crebzf, CREB/ATF bZIP transcription factor, [RH, Score=52.4, Expect=4e-07]} {Celegans: WBGene00000793, crh-1, CREB Homolog; Cyclic AMP-response element binding protein 1 gamma 2, [Score=48.1, Expect=6e-06]} {RNA1509_18369, RNA1509_59355} {RNA1310_18734, RNA1509_18369, RNA1509_59355} {RNA1509_18369, RNA1509_59355, RNA815_17575}
11.	MligTC455_52262	145	3.02	Mlig455_055398	Neo: - Age: -	DHX9	0.958	-	-	-	-	0.958	-	Mlig455_055398 {REF} {Length: 4891} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=73.1]; Helicase conserved C-terminal domain [PF00271.33, score=52.8]; Helicase associated domain (HA2) [PF04408.25, score=50.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=39.1]; DEAD/DEAH box helicase [PF00270.31, score=30.5]} {Human: ENSG00000135829, DHX9, DExH-box helicase 9, [RH, Score=1137, Expect=0.0]} {Mouse: ENSMUSG00000042699, Dhx9, DEAH (Asp-Glu-Ala-His) box polypeptide 9, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0002774, mle, maleless, [RH, Score=1058, Expect=0.0]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [RH, Score=868, Expect=0.0]} {Smed: dd_Smed_v6_4815_0_1, dd_Smed_v6_4815_0_1, [RH, Score=1115, Expect=0.0]} {RNA1509_8352} {RNA1310_2204.1} {RNA815_3757}
12.	MligTC455_36198	102	2.13	Mlig455_061010	Neo: - Age: -	TNS1	0.957	-	-	-	-	0.957	-	Mlig455_061010 {REF} {Length: 1601} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=49.9]; SH2 domain [PF00017.26, score=30.3]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=155, Expect=5e-42]; ENSG00000136205, TNS3, tensin 3, [Score=151, Expect=2e-40]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=155, Expect=2e-42]; ENSMUSG00000020422, Tns3, tensin 3, [Score=154, Expect=1e-41]} {Dmel: FBgn0000244, by, blistery, [Score=150, Expect=8e-41]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=164, Expect=2e-48]} {Smed: dd_Smed_v6_4454_0_5, dd_Smed_v6_4454_0_5, [Score=153, Expect=5e-45]} {RNA1509_28824} {RNA1310_20281} {RNA815_21042}
13.	MligTC455_36784	15	0.3	Mlig455_046783, Mlig455_069957	Neo: - Age: logFC(26M/2M)=-0.515		0.956	-	-	-	-	0.956	-	Mlig455_046783 {REF} {Length: 1605} {RNA1509_14365} {RNA1310_13117.2} {RNA815_6458.1} Mlig455_069957 {REF} {Length: 1377} {RNA1509_14365} {RNA1310_13117.4} {RNA815_6458.1}
14.	MligTC455_16586	410	8.55	Mlig455_059353, Mlig455_065581	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.614		0.955	-	-	-	-	0.955	-	Mlig455_059353 {REF} {Length: 2125} {TRANSSPLICED} {RNA1310_49327} Mlig455_065581 {REF} {Length: 2122} {TRANSSPLICED} {RNA1310_49327}
15.	MligTC455_33715	36	0.75	Mlig455_048624, Mlig455_048741	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_048624 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_54597} {RNA1310_113588} {RNA815_29533} Mlig455_048741 {REF} {Length: 651} {RNA1310_113588} {RNA815_29533}
16.	MligTC455_36197	92	1.91	Mlig455_053513	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.446	TNS1	0.952	-	-	-	-	0.952	-	Mlig455_053513 {REF} {Length: 3575} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=47.7]; SH2 domain [PF00017.26, score=40.2]} {Human: ENSG00000079308, TNS1, tensin 1, [Score=177, Expect=7e-45]} {Mouse: ENSMUSG00000055322, Tns1, tensin 1, [Score=176, Expect=8e-45]; ENSMUSG00000020422, Tns3, tensin 3, [Score=169, Expect=9e-43]} {Dmel: FBgn0000244, by, blistery, [Score=166, Expect=2e-42]} {Celegans: WBGene00006508, tns-1, TeNSin homolog, [Score=181, Expect=5e-51]} {Smed: dd_Smed_v6_4494_0_2, dd_Smed_v6_4494_0_2, [Score=181, Expect=5e-48]} {RNA1509_28824, RNA1509_50496} {RNA1310_7318, RNA1509_28824, RNA1509_50496} {RNA1509_28824, RNA1509_50496, RNA815_6926}
17.	MligTC455_30324	73	1.52	Mlig455_041537	Neo: - Age: -	NYNRIN	0.951	-	-	-	-	0.951	-	Mlig455_041537 {REF} {Length: 4072} {Pfam: Integrase zinc binding domain [PF17921.3, score=81.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=52.0, Expect=9e-07]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_14472_0_16, dd_Smed_v6_14472_0_16, [Score=73.9, Expect=3e-15]} {RNA1509_29299} {RNA1310_18534} {RNA815_7746}
18.	MligTC455_32321	50	1.04	Mlig455_001883	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_001883 {REF} {Length: 2809} {TRANSSPLICED} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=19.2]} {RNA1509_48407} {RNA1310_25218.1} {RNA815_28321}

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