Data search


search
Exact
Search

Results for MligTC455_36869

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36869 69 1.45 Mlig455_037726

Neo: -

Age: -

Mlig455_037726 {REF} {Length: 3927} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_10807.1, RNA1509_32637} {RNA1509_32637, RNA815_15623}

Cumulative graph for MligTC455_36869

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.309 1.503 0.50395 1.00000
RegionR2 1.624 1.503 0.26488 0.64712
RegionR3 2.768 1.503 0.02498 0.27030
RegionR4 0.29 1.503 0.69452 0.98508
RegionR5 2.591 1.503 0.02041 0.09855
RegionR6 -1.858 1.503 1.00000 1.00000
RegionR7 -1.741 1.503 0.99969 1.00000
RegionR8 0.636 1.503 0.68967 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.445 1.503 0.99994 1.00000
RegenerationR2 0.935 1.503 0.21956 0.66718
RegenerationR3 -0.529 1.503 0.53839 0.87645
RegenerationR4 1.554 1.503 0.11356 0.51606
RegenerationR5 -0.715 1.503 0.38795 0.78999
RegenerationR6 3.301 1.503 0.04530 0.26570
RegenerationBL 2.622 1.503 0.09004 0.35156
RegenerationTP 2.787 1.503 0.11762 0.52431


Genes with expression patterns similar to MligTC455_36869

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36869 69 1.45 Mlig455_037726

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000 Mlig455_037726 {REF} {Length: 3927} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_10807.1, RNA1509_32637} {RNA1509_32637, RNA815_15623}
2. MligTC455_44021 681 14.19 Mlig455_027402

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.474

STYXL1 0.977 - - - - 0.977 - Mlig455_027402 {REF} {Length: 1736} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=65.4]; Rhodanese-like domain [PF00581.22, score=29.2]} {Human: ENSG00000127952, STYXL1, serine/threonine/tyrosine interacting like 1, [RH, Score=196, Expect=2e-60]} {Mouse: ENSMUSG00000019178, Styxl1, serine/threonine/tyrosine interacting-like 1, [RH, Score=188, Expect=1e-57]} {Dmel: FBgn0039742, CG15528, [Score=52.8, Expect=6e-08]} {Celegans: WBGene00017428, F13D11.3, [Score=57.8, Expect=5e-10]} {Smed: dd_Smed_v6_11358_0_1, dd_Smed_v6_11358_0_1, [RH, Score=251, Expect=8e-83]} {RNA1509_4392} {RNA1310_10767.2, RNA1509_4392} {RNA1509_4392, RNA815_8325.1}
3. MligTC455_40287 116 2.41 Mlig455_043891

Neo: -

Age: logFC(26M/2M)=-0.916

Regeneration-enriched BL: 6.689
Regeneration-enriched R2: 6.021

0.968 - - - - 0.968 - Mlig455_043891 {REF} {Length: 4345} {RNA1509_22214} {RNA1310_39071, RNA1509_22214} {RNA1509_22214, RNA815_41273}
4. MligTC455_31673 2190 45.63 Mlig455_020494, Mlig455_020496, Mlig455_021456, Mlig455_022005, Mlig455_028753, Mlig455_029272, Mlig455_032615, Mlig455_035661, Mlig455_035663, Mlig455_040170, Mlig455_041027, Mlig455_042568, Mlig455_052047, Mlig455_052049, Mlig455_060462, Mlig455_060472, Mlig455_060475, Mlig455_062821, Mlig455_063990, Mlig455_071051, Mlig455_071053

Neo: -

Age: -

0.966 - - - - 0.966 -

Mlig455_020494 {REF} {Length: 3502} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_020496 {REF} {Length: 45} {NoTransDecoderORF} {RNA1509_51272} {RNA1310_18898} {RNA815_26166}

Mlig455_021456 {REF} {Length: 6612} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_022005 {REF} {Length: 5643} {NoTransDecoderORF} {RNA1509_46} {RNA1310_143.1} {RNA815_12188}

Mlig455_028753 {REF} {Length: 4224} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_029272 {REF} {Length: 842} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_9389.2} {RNA815_12646}

Mlig455_032615 {REF} {Length: 1323} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_035661 {REF} {Length: 2146} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_035663 {REF} {Length: 1967} {NoTransDecoderORF} {RNA1509_10119} {RNA1310_143.1} {RNA815_11686}

Mlig455_040170 {REF} {Length: 2245} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_041027 {REF} {Length: 2951} {RNA1509_46} {RNA1310_143.1} {RNA815_12188}

Mlig455_042568 {REF} {Length: 3443} {NoTransDecoderORF} {RNA1509_46, RNA1509_6737} {RNA1310_143.1, RNA1509_6737} {RNA1509_6737, RNA815_12188}

Mlig455_052047 {REF} {Length: 2362} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40407} {RNA1310_143.1, RNA1509_40407} {RNA1509_40407, RNA815_12188}

Mlig455_052049 {REF} {Length: 2860} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060462 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060472 {REF} {Length: 2246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_060475 {REF} {Length: 320} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_18898} {RNA815_12646}

Mlig455_062821 {REF} {Length: 1726} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_063990 {REF} {Length: 1968} {NoTransDecoderORF} {RNA1509_10119, RNA1509_22165, RNA1509_43624} {RNA1310_143.1, RNA1509_10119, RNA1509_22165, RNA1509_43624} {RNA1509_10119, RNA1509_22165, RNA1509_43624, RNA815_11686}

Mlig455_071051 {REF} {Length: 1795} {NoTransDecoderORF} {RNA1509_43132} {RNA1310_143.1} {RNA815_12188}

Mlig455_071053 {REF} {Length: 339} {NoTransDecoderORF} {RNA1509_51208} {RNA1310_52445} {RNA815_23064}
5. MligTC455_14328 585 12.19 Mlig455_035956, Mlig455_058425

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.032

Region-enriched R2: 6.210/0.01234
Region-enriched R3: 5.834/0.00211

CYP2U1 0.964 - - - - 0.964 -

Mlig455_035956 {REF} {Length: 4315} {Pfam: Cytochrome P450 [PF00067.24, score=301.9]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=213, Expect=5e-62]; ENSG00000108242, CYP2C18, cytochrome P450 family 2 subfamily C member 18, [Score=205, Expect=9e-60]} {Mouse: ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=215, Expect=9e-64]; ENSMUSG00000025003, Cyp2c39, cytochrome P450, family 2, subfamily c, polypeptide 39, [Score=214, Expect=3e-63]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=212, Expect=2e-62]; ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [Score=208, Expect=5e-61]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=179, Expect=5e-50]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=206, Expect=3e-60]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=226, Expect=7e-68]} {RNA1509_49553} {RNA1310_2911.1} {RNA815_12179}

Mlig455_058425 {REF} {Length: 2850} {Pfam: Cytochrome P450 [PF00067.24, score=301.9]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=213, Expect=5e-62]; ENSG00000108242, CYP2C18, cytochrome P450 family 2 subfamily C member 18, [Score=205, Expect=9e-60]} {Mouse: ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=215, Expect=9e-64]; ENSMUSG00000025003, Cyp2c39, cytochrome P450, family 2, subfamily c, polypeptide 39, [Score=214, Expect=3e-63]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=212, Expect=2e-62]; ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [Score=208, Expect=5e-61]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=179, Expect=5e-50]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=206, Expect=3e-60]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=226, Expect=7e-68]} {RNA1509_49553} {RNA1310_2911.1, RNA1509_49553} {RNA1509_49553, RNA815_12179}
6. MligTC455_11497 60 1.24 Mlig455_038567

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_038567 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_23145} {RNA815_41033.2}
7. MligTC455_20071 186 3.86 Mlig455_020495, Mlig455_021455, Mlig455_060464

Neo: -

Age: -

0.959 - - - - 0.959 -

Mlig455_020495 {REF} {Length: 388} {NoTransDecoderORF} {RNA1509_29468} {RNA1310_143.1} {RNA815_104.1}

Mlig455_021455 {REF} {Length: 530} {NoTransDecoderORF} {RNA1509_43624} {RNA1310_9389.1} {RNA815_104.1}

Mlig455_060464 {REF} {Length: 346} {NoTransDecoderORF} {RNA1509_29468} {RNA1310_143.1} {RNA815_104.1}
8. MligTC455_28135 137 2.85 Mlig455_037259, Mlig455_062385

Neo: -

Age: -

0.959 - - - - 0.959 -

Mlig455_037259 {REF} {Length: 337} {NoTransDecoderORF} {RNA1509_26115} {RNA1310_94378} {RNA815_9283.1}

Mlig455_062385 {REF} {Length: 930} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_26110}
9. MligTC455_42789 51 1.05 Mlig455_049242

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_049242 {REF} {Length: 2156} {NoTransDecoderORF} {RNA1509_49659} {RNA1310_121980} {RNA815_13521.1}
10. MligTC455_30269 148 3.09 Mlig455_050984

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_050984 {REF} {Length: 3262} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=55.5, Expect=1e-09]} {RNA1509_5039} {RNA1310_3442.1} {RNA815_3500.1}
11. MligTC455_30263 126 2.62 Mlig455_003389

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_003389 {REF} {Length: 5048} {NoTransDecoderORF} {RNA1509_31144, RNA1509_45963} {RNA1310_27681, RNA1509_45963} {RNA1509_45963, RNA815_5159.1}
12. MligTC455_36061 33 0.69 Mlig455_007140

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.616

0.951 - - - - 0.951 - Mlig455_007140 {REF} {Length: 7333} {Smed: dd_Smed_v6_26523_0_1, dd_Smed_v6_26523_0_1, [Score=39.3, Expect=1e-05]} {RNA1509_21038} {RNA1310_17276.1} {RNA815_20842.1}
13. MligTC455_18126 1010 21.04 Mlig455_004944, Mlig455_019712

Neo: -

Age: -

Region-enriched R2: 2.788/0.00294

BBOF1 0.95 - - - - 0.950 -

Mlig455_004944 {REF} {Length: 2657} {Pfam: Domain of unknown function (DUF4515) [PF14988.8, score=61.7]} {Human: ENSG00000119636, BBOF1, basal body orientation factor 1, [Score=286, Expect=6e-90]} {Mouse: ENSMUSG00000057265, Bbof1, basal body orientation factor 1, [Score=277, Expect=3e-86]} {Dmel: FBgn0036962, CG17122, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_9328_0_1, dd_Smed_v6_9328_0_1, [Score=384, Expect=6e-128]} {RNA1509_2114} {RNA1310_13083.1} {RNA815_4465}

Mlig455_019712 {REF} {Length: 3477} {Pfam: Domain of unknown function (DUF4515) [PF14988.8, score=61.5]} {Human: ENSG00000119636, BBOF1, basal body orientation factor 1, [RH, Score=335, Expect=2e-108]} {Mouse: ENSMUSG00000057265, Bbof1, basal body orientation factor 1, [RH, Score=320, Expect=7e-103]} {Dmel: FBgn0036962, CG17122, [Score=55.5, Expect=9e-08]} {Smed: dd_Smed_v6_9328_0_1, dd_Smed_v6_9328_0_1, [RH, Score=427, Expect=2e-144]} {RNA1509_2114} {RNA1310_13083.1, RNA1509_2114} {RNA1509_2114, RNA815_4465}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA