TomoSeq data search

Data search

Results for MligTC455_36919

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_36919	134	2.79	Mlig455_040211	Neo: - Age: - Region-enriched R7: 2.837/0.02063 Regeneration-downregulated TP: -7.378 Regeneration-depleted TP: -7.378	ERBB2	Mlig455_040211 {REF} {Length: 5317} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=262.1]; Protein kinase domain [PF00069.27, score=135.7]; Furin-like cysteine rich region [PF00757.22, score=67.4]; Growth factor receptor domain IV [PF14843.8, score=58.4]; Receptor L domain [PF01030.26, score=35.0]; Kinase-like [PF14531.8, score=20.3]} {Human: ENSG00000141736, ERBB2, erb-b2 receptor tyrosine kinase 2, [RH, Score=400, Expect=1e-119]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=418, Expect=1e-125]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=276, Expect=3e-76]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=254, Expect=4e-69]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=296, Expect=8e-83]} {RNA1509_4668} {RNA1310_1923.2} {RNA815_5649.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36919

134

2.79

Mlig455_040211

Neo: -

Age: -

Region-enriched R7: 2.837/0.02063

Regeneration-downregulated TP: -7.378

Regeneration-depleted TP: -7.378

ERBB2

Mlig455_040211 {REF} {Length: 5317} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=262.1]; Protein kinase domain [PF00069.27, score=135.7]; Furin-like cysteine rich region [PF00757.22, score=67.4]; Growth factor receptor domain IV [PF14843.8, score=58.4]; Receptor L domain [PF01030.26, score=35.0]; Kinase-like [PF14531.8, score=20.3]} {Human: ENSG00000141736, ERBB2, erb-b2 receptor tyrosine kinase 2, [RH, Score=400, Expect=1e-119]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=418, Expect=1e-125]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=276, Expect=3e-76]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=254, Expect=4e-69]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=296, Expect=8e-83]} {RNA1509_4668} {RNA1310_1923.2} {RNA815_5649.1}

Cumulative graph for MligTC455_36919

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.086	2.152	0.28857	0.94106
RegionR2	0.957	2.152	0.38564	0.78032
RegionR3	0.305	2.152	0.72397	1.00000
RegionR4	-0.452	2.152	0.95443	1.00000
RegionR5	-0.369	2.152	0.94402	1.00000
RegionR6	0.213	2.152	0.77577	1.00000
RegionR7	2.837	2.152	0.00050	0.02063
RegionR8	1.595	2.152	0.23275	0.84689

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.14	2.152	0.99995	1.00000
RegenerationR2	-2.927	2.152	0.00015	0.01471
RegenerationR3	-2.086	2.152	0.00773	0.16099
RegenerationR4	-1.974	2.152	0.01447	0.18835
RegenerationR5	-2.452	2.152	0.00145	0.06539
RegenerationR6	-1.637	2.152	0.03992	0.24994
RegenerationBL	-2.601	2.152	0.01146	0.10907
RegenerationTP	-7.378	2.152	0.00006	0.00818	Specific for TP: -7.378

Genes with expression patterns similar to MligTC455_36919

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36919	134	2.79	Mlig455_040211	Neo: - Age: - Region-enriched R7: 2.837/0.02063 Regeneration-downregulated TP: -7.378 Regeneration-depleted TP: -7.378	ERBB2	4	1.000	1.000	1.000	-	1.000	-	Mlig455_040211 {REF} {Length: 5317} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=262.1]; Protein kinase domain [PF00069.27, score=135.7]; Furin-like cysteine rich region [PF00757.22, score=67.4]; Growth factor receptor domain IV [PF14843.8, score=58.4]; Receptor L domain [PF01030.26, score=35.0]; Kinase-like [PF14531.8, score=20.3]} {Human: ENSG00000141736, ERBB2, erb-b2 receptor tyrosine kinase 2, [RH, Score=400, Expect=1e-119]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=418, Expect=1e-125]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=276, Expect=3e-76]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=254, Expect=4e-69]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=296, Expect=8e-83]} {RNA1509_4668} {RNA1310_1923.2} {RNA815_5649.1}
2.	MligTC455_25472	100	2.07	Mlig455_040494	Neo: - Age: Up-Up-Down	RAPH1	0.962	-	-	-	-	0.962	-	Mlig455_040494 {REF} {Length: 1705} {Pfam: PH domain [PF00169.31, score=40.6]} {Human: ENSG00000173166, RAPH1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, [Score=107, Expect=2e-26]} {Mouse: ENSMUSG00000026014, Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, [Score=104, Expect=7e-26]} {Dmel: FBgn0261811, pico, [Score=88.2, Expect=4e-20]} {Celegans: WBGene00003243, mig-10, Abnormal cell migration protein 10, [Score=90.5, Expect=3e-21]} {Smed: dd_Smed_v6_3216_0_1, dd_Smed_v6_3216_0_1, [Score=120, Expect=9e-32]} {RNA1509_24403} {RNA1310_12419} {RNA815_13072}
3.	MligTC455_37379	1312	27.33	Mlig455_063552	Neo: - Age: logFC(26M/2M)=0.263 Region-enriched R4: 1.276/0.01237	ALPK1	0.952	-	-	-	-	0.952	-	Mlig455_063552 {REF} {Length: 2442} {Pfam: Alpha-kinase family [PF02816.20, score=126.9]; von Willebrand factor type A domain [PF13519.8, score=22.7]} {Human: ENSG00000073331, ALPK1, alpha kinase 1, [Score=70.9, Expect=5e-12]} {Mouse: ENSMUSG00000024727, Trpm6, transient receptor potential cation channel, subfamily M, member 6, [Score=67.0, Expect=5e-11]; ENSMUSG00000035064, Eef2k, eukaryotic elongation factor-2 kinase, [Score=64.3, Expect=3e-10]; ENSMUSG00000028028, Alpk1, alpha-kinase 1, [Score=64.3, Expect=4e-10]} {Celegans: WBGene00001160, efk-1, Eukaryotic elongation factor 2 kinase, [Score=59.7, Expect=4e-09]} {Smed: dd_Smed_v6_2651_0_1, dd_Smed_v6_2651_0_1, [Score=65.9, Expect=5e-11]} {RNA1509_2701} {RNA1310_9958, RNA1509_2701} {RNA1509_2701, RNA815_3448}
4.	MligTC455_43278	1082	22.55	Mlig455_029717	Neo: Neoblast Age: logFC(26M/2M)=0.298		0.951	-	-	-	-	0.951	-	Mlig455_029717 {REF} {Length: 2174} {TRANSSPLICED} {RNA1509_8103} {RNA1310_6457, RNA1509_8103} {RNA1509_8103, RNA815_11775}