Data search
Results for MligTC455_25472
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25472 | 100 | 2.07 | Mlig455_040494 | Neo: - Age: Up-Up-Down |
RAPH1 | Mlig455_040494 {REF} {Length: 1705} {Pfam: PH domain [PF00169.31, score=40.6]} {Human: ENSG00000173166, RAPH1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, [Score=107, Expect=2e-26]} {Mouse: ENSMUSG00000026014, Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, [Score=104, Expect=7e-26]} {Dmel: FBgn0261811, pico, [Score=88.2, Expect=4e-20]} {Celegans: WBGene00003243, mig-10, Abnormal cell migration protein 10, [Score=90.5, Expect=3e-21]} {Smed: dd_Smed_v6_3216_0_1, dd_Smed_v6_3216_0_1, [Score=120, Expect=9e-32]} {RNA1509_24403} {RNA1310_12419} {RNA815_13072} |
Cumulative graph for MligTC455_25472
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.451 | 1.96 | 1.00000 | 1.00000 | |
| RegionR2 | 1.006 | 1.96 | 0.40791 | 0.80150 | |
| RegionR3 | 0.614 | 1.96 | 0.53267 | 1.00000 | |
| RegionR4 | 1.459 | 1.96 | 0.25072 | 0.55023 | |
| RegionR5 | 0.048 | 1.96 | 0.74043 | 1.00000 | |
| RegionR6 | 1.124 | 1.96 | 0.30350 | 0.89475 | |
| RegionR7 | 2.79 | 1.96 | 0.01203 | 0.19224 | |
| RegionR8 | -4.59 | 1.96 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.687 | 1.96 | 0.99995 | 1.00000 | |
| RegenerationR2 | 0.217 | 1.96 | 0.72726 | 0.96484 | |
| RegenerationR3 | -0.009 | 1.96 | 0.98954 | 1.00000 | |
| RegenerationR4 | -0.165 | 1.96 | 0.84179 | 1.00000 | |
| RegenerationR5 | 0.369 | 1.96 | 0.62651 | 0.92123 | |
| RegenerationR6 | 0.452 | 1.96 | 0.54668 | 0.83695 | |
| RegenerationBL | 1.928 | 1.96 | 0.20512 | 0.54618 | |
| RegenerationTP | 0.778 | 1.96 | 0.65140 | 0.98957 |
Genes with expression patterns similar to MligTC455_25472
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25472 | 100 | 2.07 | Mlig455_040494 | Neo: - Age: Up-Up-Down |
RAPH1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040494 {REF} {Length: 1705} {Pfam: PH domain [PF00169.31, score=40.6]} {Human: ENSG00000173166, RAPH1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, [Score=107, Expect=2e-26]} {Mouse: ENSMUSG00000026014, Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, [Score=104, Expect=7e-26]} {Dmel: FBgn0261811, pico, [Score=88.2, Expect=4e-20]} {Celegans: WBGene00003243, mig-10, Abnormal cell migration protein 10, [Score=90.5, Expect=3e-21]} {Smed: dd_Smed_v6_3216_0_1, dd_Smed_v6_3216_0_1, [Score=120, Expect=9e-32]} {RNA1509_24403} {RNA1310_12419} {RNA815_13072} |
| 2. | MligTC455_43278 | 1082 | 22.55 | Mlig455_029717 | Neo: Neoblast Age: logFC(26M/2M)=0.298 |
0.966 | - | - | - | - | 0.966 | - | Mlig455_029717 {REF} {Length: 2174} {TRANSSPLICED} {RNA1509_8103} {RNA1310_6457, RNA1509_8103} {RNA1509_8103, RNA815_11775} | |
| 3. | MligTC455_36919 | 134 | 2.79 | Mlig455_040211 | Neo: - Age: - Region-enriched R7: 2.837/0.02063 Regeneration-downregulated TP: -7.378 Regeneration-depleted TP: -7.378 |
ERBB2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_040211 {REF} {Length: 5317} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=262.1]; Protein kinase domain [PF00069.27, score=135.7]; Furin-like cysteine rich region [PF00757.22, score=67.4]; Growth factor receptor domain IV [PF14843.8, score=58.4]; Receptor L domain [PF01030.26, score=35.0]; Kinase-like [PF14531.8, score=20.3]} {Human: ENSG00000141736, ERBB2, erb-b2 receptor tyrosine kinase 2, [RH, Score=400, Expect=1e-119]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=418, Expect=1e-125]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=276, Expect=3e-76]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=254, Expect=4e-69]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=296, Expect=8e-83]} {RNA1509_4668} {RNA1310_1923.2} {RNA815_5649.1} |
| 4. | MligTC455_47374 | 189 | 3.94 | Mlig455_044966 | Neo: - Age: Down-Down-Up |
WDR82 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_044966 {REF} {Length: 1552} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.9]} {Human: ENSG00000164091, WDR82, WD repeat domain 82, [Score=251, Expect=3e-82]} {Mouse: ENSMUSG00000020257, Wdr82, WD repeat domain containing 82, [Score=251, Expect=2e-82]} {Dmel: FBgn0032030, Wdr82, WD repeat domain 82, [Score=254, Expect=7e-84]} {Celegans: WBGene00016374, swd-2.2, Set1 WD40 repeat protein homolog, [Score=145, Expect=2e-41]} {Smed: dd_Smed_v6_4830_0_1, dd_Smed_v6_4830_0_1, [Score=194, Expect=3e-60]} {RNA1509_15991, RNA1509_53429} {RNA1310_21239.1, RNA1509_53429} {RNA1509_53429, RNA815_37495} |
| 5. | MligTC455_47474 | 125 | 2.6 | Mlig455_008057 | Neo: Int S/G2/M Age: - |
POLR2G | 0.955 | - | - | 0.955 | - | - | - | Mlig455_008057 {REF} {Length: 2319} {Pfam: S1 RNA binding domain [PF00575.25, score=55.5]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=43.8]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=261, Expect=5e-90]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=261, Expect=3e-90]} {Dmel: FBgn0051155, Rpb7, [RH, Score=243, Expect=3e-83]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=243, Expect=6e-83]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=205, Expect=4e-68]} {RNA1509_27027} {RNA1310_27629} {RNA815_7998} |
| 6. | MligTC455_13656 | 118 | 2.45 | Mlig455_027799 | Neo: Irradiation Age: Down-Up-Down Region-enriched R6: 2.903/0.03822 |
0.952 | - | - | 0.952 | - | - | - | Mlig455_027799 {REF} {Length: 4703} {RNA1509_57337} {RNA1310_9265} {RNA815_13115} | |
| 7. | MligTC455_27972 | 169 | 3.53 | Mlig455_008997 | Neo: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_008997 {REF} {Length: 4425} {TRANSSPLICED} {Pfam: Intermediate filament protein [PF00038.23, score=25.8]; Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=24.0]; Hyaluronan mediated motility receptor N-terminal [PF15905.7, score=22.2]; Spermatogenesis-associated protein 24 [PF15175.8, score=19.6]} {Smed: dd_Smed_v6_4718_0_1, dd_Smed_v6_4718_0_1, [RH, Score=84.0, Expect=2e-20]} {RNA1509_18376} {RNA1310_28731.1, RNA1509_18376} {RNA1509_18376, RNA815_11279} | |
| 8. | MligTC455_19648 | 125 | 2.6 | Mlig455_034667, Mlig455_067587 | Neo: - Age: - Regeneration-downregulated BL: -7.490 Regeneration-depleted BL: -7.490 |
CHRNA7, CHRNA9 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_034667 {REF} {Length: 1938} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=125.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=97.4]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=210, Expect=4e-62]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=207, Expect=9e-61]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=207, Expect=2e-61]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=205, Expect=4e-60]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=202, Expect=4e-59]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=200, Expect=1e-58]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=213, Expect=2e-63]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=206, Expect=1e-60]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=217, Expect=3e-64]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=207, Expect=2e-61]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=202, Expect=1e-58]} {RNA1310_33414.1} {RNA815_34654} Mlig455_067587 {REF} {Length: 1709} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=158.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=96.7]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=230, Expect=8e-69]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=230, Expect=8e-69]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=228, Expect=3e-68]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=224, Expect=1e-66]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=230, Expect=3e-69]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=227, Expect=3e-68]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=221, Expect=8e-66]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=237, Expect=3e-71]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=236, Expect=1e-71]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=232, Expect=2e-69]} {RNA1310_33414.2} {RNA815_34654} |
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