TomoSeq data search

Data search

Results for MligTC455_37102

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37102

3384

70.49

Mlig455_052488

Neo: -

Age: -

UBA1

Mlig455_052488 {REF} {Length: 4470} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=365.5]; Ubiquitin-activating enzyme active site [PF10585.11, score=295.6]; Ubiquitin fold domain [PF09358.12, score=121.9]; Ubiquitin-activating enzyme E1 FCCH domain [PF16190.7, score=100.4]; Ubiquitin-activating enzyme E1 four-helix bundle [PF16191.7, score=83.4]} {Human: ENSG00000130985, UBA1, ubiquitin like modifier activating enzyme 1, [RH, Score=1182, Expect=0.0]} {Mouse: ENSMUSG00000001924, Uba1, ubiquitin-like modifier activating enzyme 1, [RH, Score=1172, Expect=0.0]; ENSMUSG00000069053, Uba1y, ubiquitin-activating enzyme, Chr Y, [RH, Score=1133, Expect=0.0]} {Dmel: FBgn0023143, Uba1, Ubiquitin activating enzyme 1, [RH, Score=1104, Expect=0.0]} {Celegans: WBGene00006699, uba-1, UBA (Human ubiquitin) related, [RH, Score=899, Expect=0.0]} {Smed: dd_Smed_v6_2377_0_1, dd_Smed_v6_2377_0_1, [RH, Score=1091, Expect=0.0]} {RNA1509_838} {RNA1310_3880} {RNA815_342.1}

Cumulative graph for MligTC455_37102

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.909	6.279	0.21332	0.85421
RegionR2	-0.172	6.279	0.65073	0.98538
RegionR3	0.009	6.279	0.97660	1.00000
RegionR4	0.958	6.279	0.01065	0.06399
RegionR5	0.395	6.279	0.19755	0.48617
RegionR6	0.234	6.279	0.46145	1.00000
RegionR7	-0.248	6.279	0.50764	1.00000
RegionR8	-0.267	6.279	0.54862	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.463	6.279	0.61156	1.00000
RegenerationR2	0.198	6.279	0.59099	0.91143
RegenerationR3	0.206	6.279	0.59191	0.90431
RegenerationR4	-0.291	6.279	0.46520	0.85026
RegenerationR5	0.208	6.279	0.58182	0.90126
RegenerationR6	0.334	6.279	0.38570	0.72602
RegenerationBL	0.779	6.279	0.03147	0.19838
RegenerationTP	0.234	6.279	0.57292	0.94594

Genes with expression patterns similar to MligTC455_37102

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37102	3384	70.49	Mlig455_052488	Neo: - Age: -	UBA1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_052488 {REF} {Length: 4470} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=365.5]; Ubiquitin-activating enzyme active site [PF10585.11, score=295.6]; Ubiquitin fold domain [PF09358.12, score=121.9]; Ubiquitin-activating enzyme E1 FCCH domain [PF16190.7, score=100.4]; Ubiquitin-activating enzyme E1 four-helix bundle [PF16191.7, score=83.4]} {Human: ENSG00000130985, UBA1, ubiquitin like modifier activating enzyme 1, [RH, Score=1182, Expect=0.0]} {Mouse: ENSMUSG00000001924, Uba1, ubiquitin-like modifier activating enzyme 1, [RH, Score=1172, Expect=0.0]; ENSMUSG00000069053, Uba1y, ubiquitin-activating enzyme, Chr Y, [RH, Score=1133, Expect=0.0]} {Dmel: FBgn0023143, Uba1, Ubiquitin activating enzyme 1, [RH, Score=1104, Expect=0.0]} {Celegans: WBGene00006699, uba-1, UBA (Human ubiquitin) related, [RH, Score=899, Expect=0.0]} {Smed: dd_Smed_v6_2377_0_1, dd_Smed_v6_2377_0_1, [RH, Score=1091, Expect=0.0]} {RNA1509_838} {RNA1310_3880} {RNA815_342.1}
2.	MligTC455_37099	2279	47.48	Mlig455_052464	Neo: - Age: Down-Up-Up	UBA1	4.487	-	0.830	0.956	0.951	0.978	0.772	Mlig455_052464 {REF} {Length: 1676} {Pfam: ThiF family [PF00899.23, score=44.0]; Ubiquitin-activating enzyme active site [PF10585.11, score=38.6]; Ubiquitin fold domain [PF09358.12, score=22.2]} {Human: ENSG00000130985, UBA1, ubiquitin like modifier activating enzyme 1, [Score=173, Expect=1e-50]} {Mouse: ENSMUSG00000001924, Uba1, ubiquitin-like modifier activating enzyme 1, [Score=174, Expect=2e-51]; ENSMUSG00000069053, Uba1y, ubiquitin-activating enzyme, Chr Y, [Score=167, Expect=6e-49]} {Dmel: FBgn0023143, Uba1, Ubiquitin activating enzyme 1, [Score=160, Expect=1e-46]} {Celegans: WBGene00006699, uba-1, UBA (Human ubiquitin) related, [Score=121, Expect=6e-33]} {Smed: dd_Smed_v6_2377_0_1, dd_Smed_v6_2377_0_1, [Score=167, Expect=2e-49]} {RNA1509_838} {RNA1310_5267.1} {RNA815_342.1}
3.	MligTC455_29626	8303	172.97	Mlig455_041134	Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.250	DAZAP1	0.968	-	-	-	0.968	-	-	Mlig455_041134 {REF} {Length: 1839} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=109.2]; RNA recognition motif [PF16367.7, score=50.8]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=24.5]} {Human: ENSG00000071626, DAZAP1, DAZ associated protein 1, [RH, Score=177, Expect=8e-52]} {Mouse: ENSMUSG00000069565, Dazap1, DAZ associated protein 1, [RH, Score=175, Expect=5e-51]} {Dmel: FBgn0004838, Hrb27C, Heterogeneous nuclear ribonucleoprotein at 27C, [RH, Score=168, Expect=2e-48]} {Celegans: WBGene00003423, msi-1, MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1, [Score=149, Expect=5e-42]} {Smed: dd_Smed_v6_1047_0_1, dd_Smed_v6_1047_0_1, [RH, Score=240, Expect=3e-77]} {RNA1509_3807, RNA1509_596} {RNA1310_18564, RNA1509_3807, RNA1509_596} {RNA1509_3807, RNA1509_596, RNA815_7168.1}
4.	MligTC455_29625	8291	172.72	Mlig455_041031	Neo: - Age: Down-Up-Down	DAZAP1	0.965	-	-	-	0.965	-	-	Mlig455_041031 {REF} {Length: 1830} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=109.4]; RNA recognition motif [PF16367.7, score=50.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=24.2]} {Human: ENSG00000071626, DAZAP1, DAZ associated protein 1, [RH, Score=177, Expect=1e-51]} {Mouse: ENSMUSG00000069565, Dazap1, DAZ associated protein 1, [RH, Score=175, Expect=5e-51]} {Dmel: FBgn0004838, Hrb27C, Heterogeneous nuclear ribonucleoprotein at 27C, [RH, Score=169, Expect=1e-48]} {Celegans: WBGene00003423, msi-1, MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1, [Score=148, Expect=6e-42]} {Smed: dd_Smed_v6_1047_0_1, dd_Smed_v6_1047_0_1, [RH, Score=240, Expect=4e-77]} {RNA1509_596, RNA1509_7407} {RNA1310_18564, RNA1509_7407} {RNA1509_7407, RNA815_7168.1}
5.	MligTC455_23313	10820	225.41	Mlig455_014147	Neo: Int S/G2/M Age: -	PSMB5	0.952	-	-	-	0.952	-	-	Mlig455_014147 {REF} {Length: 1542} {Pfam: Proteasome subunit [PF00227.28, score=164.4]} {Human: ENSG00000100804, PSMB5, proteasome subunit beta 5, [RH, Score=283, Expect=2e-96]; ENSG00000206298, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000231631, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000230669, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000236443, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000235715, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000226201, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000204264, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]; ENSG00000230034, PSMB8, proteasome subunit beta 8, [RH, Score=269, Expect=1e-90]} {Mouse: ENSMUSG00000022193, Psmb5, proteasome (prosome, macropain) subunit, beta type 5, [RH, Score=288, Expect=2e-98]; ENSMUSG00000024338, Psmb8, proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7), [RH, Score=275, Expect=6e-93]} {Dmel: FBgn0029134, Prosbeta5, Proteasome beta5 subunit, [RH, Score=285, Expect=3e-97]} {Celegans: WBGene00003951, pbs-5, Proteasome subunit beta type, [RH, Score=216, Expect=3e-70]} {Smed: dd_Smed_v6_2007_0_1, dd_Smed_v6_2007_0_1, [RH, Score=311, Expect=2e-107]} {RNA1509_17982, RNA1509_2496, RNA1509_8108} {RNA1310_26820, RNA1509_17982, RNA1509_8108} {RNA1509_17982, RNA1509_8108, RNA815_12107}

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