Data search


search
Exact
Search

Results for MligTC455_37133

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37133 268 5.59 Mlig455_043392, Mlig455_043417

Neo: -

Age: Up-Down-Up

Mlig455_043392 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_19221} {RNA815_21047}

Mlig455_043417 {REF} {Length: 2334} {NoTransDecoderORF} {RNA1509_57581} {RNA1310_19221} {RNA815_8982.1}

Cumulative graph for MligTC455_37133

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.821 2.977 0.31992 0.96910
RegionR2 1.702 2.977 0.10731 0.40391
RegionR3 0.145 2.977 0.80983 1.00000
RegionR4 1.122 2.977 0.33417 0.65292
RegionR5 1.65 2.977 0.06235 0.21919
RegionR6 0.542 2.977 0.60951 1.00000
RegionR7 -0.418 2.977 0.95004 1.00000
RegionR8 0.078 2.977 0.85780 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.419 2.977 0.44250 1.00000
RegenerationR2 0.378 2.977 0.53423 0.88621
RegenerationR3 1.661 2.977 0.03596 0.33583
RegenerationR4 0.913 2.977 0.25268 0.70098
RegenerationR5 0.801 2.977 0.23840 0.67189
RegenerationR6 1.631 2.977 0.04360 0.26102
RegenerationBL 2.272 2.977 0.00925 0.09615
RegenerationTP 1.243 2.977 0.29654 0.74174


Genes with expression patterns similar to MligTC455_37133

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37133 268 5.59 Mlig455_043392, Mlig455_043417

Neo: -

Age: Up-Down-Up

5 - 1.000 1.000 1.000 1.000 1.000

Mlig455_043392 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_19221} {RNA815_21047}

Mlig455_043417 {REF} {Length: 2334} {NoTransDecoderORF} {RNA1509_57581} {RNA1310_19221} {RNA815_8982.1}
2. MligTC455_37134 464 9.66 Mlig455_043393, Mlig455_043400, Mlig455_043560, Mlig455_043568

Neo: -

Age: -

BMI1, COMMD3-BMI1 4.7 - 0.951 0.995 0.971 0.988 0.795

Mlig455_043393 {REF} {Length: 471} {Human: ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [Score=50.1, Expect=6e-09]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [Score=49.3, Expect=3e-08]} {Mouse: ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [Score=50.8, Expect=3e-09]} {Dmel: FBgn0005624, Psc, Posterior sex combs, [Score=41.2, Expect=1e-05]} {RNA1509_30266} {RNA1310_34983} {RNA815_25352}

Mlig455_043400 {REF} {Length: 3879} {Pfam: RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=41.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=36.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.9]; Ring finger domain [PF13639.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.4]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.7]} {Human: ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [RH, Score=223, Expect=1e-69]; ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [RH, Score=223, Expect=2e-71]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [RH, Score=213, Expect=5e-67]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [RH, Score=213, Expect=5e-67]} {Mouse: ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [RH, Score=223, Expect=1e-71]} {Dmel: FBgn0005624, Psc, Posterior sex combs, [RH, Score=169, Expect=2e-47]} {Celegans: WBGene00008684, mig-32, [Score=90.1, Expect=3e-20]} {Smed: dd_Smed_v6_12753_0_1, dd_Smed_v6_12753_0_1, [RH, Score=177, Expect=1e-54]} {RNA1509_30266} {RNA1310_34983} {RNA815_25352}

Mlig455_043560 {REF} {Length: 4305} {TRANSSPLICED} {Pfam: RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=41.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=36.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.9]; Ring finger domain [PF13639.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.6]} {Human: ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [RH, Score=221, Expect=1e-70]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [RH, Score=221, Expect=8e-69]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [RH, Score=213, Expect=4e-67]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [RH, Score=213, Expect=4e-67]} {Mouse: ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [RH, Score=221, Expect=1e-70]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [RH, Score=212, Expect=7e-67]} {Dmel: FBgn0005624, Psc, Posterior sex combs, [RH, Score=169, Expect=3e-47]} {Celegans: WBGene00008684, mig-32, [Score=89.7, Expect=4e-20]} {Smed: dd_Smed_v6_12753_0_1, dd_Smed_v6_12753_0_1, [RH, Score=177, Expect=2e-54]} {RNA1509_30266} {RNA1310_34983} {RNA815_8982.1}

Mlig455_043568 {REF} {Length: 3463} {TRANSSPLICED} {Pfam: RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=41.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=36.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.9]; Ring finger domain [PF13639.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.6]} {Human: ENSG00000168283, BMI1, BMI1 proto-oncogene, polycomb ring finger, [RH, Score=222, Expect=8e-71]; ENSG00000269897, COMMD3-BMI1, COMMD3-BMI1 readthrough, [RH, Score=221, Expect=5e-69]; ENSG00000278644, PCGF2, polycomb group ring finger 2, [RH, Score=213, Expect=2e-67]; ENSG00000277258, PCGF2, polycomb group ring finger 2, [RH, Score=213, Expect=2e-67]} {Mouse: ENSMUSG00000026739, Bmi1, Bmi1 polycomb ring finger oncogene, [RH, Score=222, Expect=4e-71]; ENSMUSG00000018537, Pcgf2, polycomb group ring finger 2, [RH, Score=213, Expect=3e-67]} {Dmel: FBgn0005624, Psc, Posterior sex combs, [RH, Score=169, Expect=3e-47]} {Celegans: WBGene00008684, mig-32, [Score=90.1, Expect=3e-20]} {Smed: dd_Smed_v6_12753_0_1, dd_Smed_v6_12753_0_1, [RH, Score=177, Expect=2e-54]} {RNA1509_30266} {RNA1310_34983, RNA1509_30266} {RNA1509_30266, RNA815_8982.1}
3. MligTC455_45977 2671 55.65 Mlig455_023593, Mlig455_068112

Neo: -

Age: logFC(26M/2M)=-0.892

Region-enriched R2: 2.870/0.00031

MUC4 1.791 - - 0.951 - 0.840 -

Mlig455_023593 {REF} {Length: 6716} {TRANSSPLICED} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.4]; EGF-like domain [PF00008.29, score=74.6]; EGF domain [PF12947.9, score=64.6]; Complement Clr-like EGF-like [PF12662.9, score=58.7]; von Willebrand factor type D domain [PF00094.27, score=54.6]; Coagulation Factor Xa inhibitory site [PF14670.8, score=40.9]; Human growth factor-like EGF [PF12661.9, score=38.7]; Nidogen-like [PF06119.16, score=25.5]} {Human: ENSG00000278303, MUC4, mucin 4, cell surface associated, [RH, Score=137, Expect=2e-31]; ENSG00000145113, MUC4, mucin 4, cell surface associated, [RH, Score=137, Expect=2e-31]; ENSG00000277585, MUC4, mucin 4, cell surface associated, [RH, Score=137, Expect=2e-31]; ENSG00000273822, MUC4, mucin 4, cell surface associated, [RH, Score=137, Expect=2e-31]; ENSG00000273984, MUC4, mucin 4, cell surface associated, [RH, Score=137, Expect=2e-31]; ENSG00000276613, MUC4, mucin 4, cell surface associated, [RH, Score=137, Expect=2e-31]; ENSG00000278468, MUC4, mucin 4, cell surface associated, [RH, Score=135, Expect=6e-31]} {Mouse: ENSMUSG00000079620, Muc4, mucin 4, [RH, Score=112, Expect=6e-24]} {Dmel: FBgn0004647, N, Notch, [Score=103, Expect=2e-21]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=94.0, Expect=1e-18]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=92.0, Expect=3e-18]} {RNA1509_5446} {RNA1310_1366} {RNA815_327.2}

Mlig455_068112 {REF} {Length: 6638} {TRANSSPLICED} {Pfam: Calcium-binding EGF domain [PF07645.17, score=82.1]; EGF-like domain [PF00008.29, score=75.3]; EGF domain [PF12947.9, score=65.2]; Complement Clr-like EGF-like [PF12662.9, score=59.4]; von Willebrand factor type D domain [PF00094.27, score=54.7]; Coagulation Factor Xa inhibitory site [PF14670.8, score=41.6]; Human growth factor-like EGF [PF12661.9, score=39.4]; Nidogen-like [PF06119.16, score=25.6]} {Human: ENSG00000273822, MUC4, mucin 4, cell surface associated, [RH, Score=135, Expect=1e-30]; ENSG00000277585, MUC4, mucin 4, cell surface associated, [RH, Score=135, Expect=1e-30]; ENSG00000276613, MUC4, mucin 4, cell surface associated, [RH, Score=135, Expect=1e-30]; ENSG00000273984, MUC4, mucin 4, cell surface associated, [RH, Score=135, Expect=1e-30]; ENSG00000278303, MUC4, mucin 4, cell surface associated, [RH, Score=135, Expect=1e-30]; ENSG00000145113, MUC4, mucin 4, cell surface associated, [RH, Score=135, Expect=7e-31]; ENSG00000278468, MUC4, mucin 4, cell surface associated, [RH, Score=133, Expect=3e-30]} {Mouse: ENSMUSG00000079620, Muc4, mucin 4, [RH, Score=110, Expect=2e-23]} {Dmel: FBgn0004647, N, Notch, [Score=103, Expect=2e-21]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=93.6, Expect=1e-18]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=92.4, Expect=3e-18]} {RNA1509_20713, RNA1509_53794, RNA1509_5446} {RNA1310_1366, RNA1509_20713, RNA1509_53794} {RNA1509_20713, RNA1509_53794, RNA815_327.2}
4. MligTC455_35517 1775 36.99 Mlig455_058832

Neo: -

Age: -

SPEN 1.717 - - - 0.957 0.760 - Mlig455_058832 {REF} {Length: 6056} {Pfam: SPOC domain [PF07744.15, score=114.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=81.8]; Occluded RNA-recognition motif [PF16842.7, score=34.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=208, Expect=2e-53]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=209, Expect=1e-53]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=204, Expect=3e-52]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=97.8, Expect=6e-20]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [Score=187, Expect=2e-47]} {RNA1509_1106, RNA1509_18970, RNA1509_57047} {RNA1310_665, RNA1509_1106, RNA1509_18970, RNA1509_57047} {RNA1509_1106, RNA1509_18970, RNA1509_57047, RNA815_665}
5. MligTC455_49419 688 14.34 Mlig455_026923, Mlig455_027016, Mlig455_027080

Neo: -

Age: logFC(26M/2M)=-0.472

Region-enriched R4: 1.839/0.01555

Regeneration-upregulated BL: 2.229

Regeneration-enriched BL: 2.229

ZDHHC22 1.714 - - 0.966 0.748 - -

Mlig455_026923 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=84.9]} {Human: ENSG00000177108, ZDHHC22, zinc finger DHHC-type containing 22, [RH, Score=79.3, Expect=3e-16]} {Mouse: ENSMUSG00000048483, Zdhhc22, zinc finger, DHHC-type containing 22, [RH, Score=85.1, Expect=2e-18]} {Dmel: FBgn0034729, CG10344, [RH, Score=96.3, Expect=2e-22]} {Celegans: WBGene00019344, dhhc-10, Palmitoyltransferase, [RH, Score=103, Expect=1e-24]} {Smed: dd_Smed_v6_13359_0_1, dd_Smed_v6_13359_0_1, [Score=85.1, Expect=3e-18]} {RNA1509_34618} {RNA1310_26262} {RNA815_5957}

Mlig455_027016 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=86.9]} {Human: ENSG00000177108, ZDHHC22, zinc finger DHHC-type containing 22, [RH, Score=80.9, Expect=7e-17]} {Mouse: ENSMUSG00000048483, Zdhhc22, zinc finger, DHHC-type containing 22, [RH, Score=86.7, Expect=4e-19]} {Dmel: FBgn0034729, CG10344, [RH, Score=96.7, Expect=8e-23]} {Celegans: WBGene00019344, dhhc-10, Palmitoyltransferase, [RH, Score=105, Expect=6e-26]} {Smed: dd_Smed_v6_13359_0_1, dd_Smed_v6_13359_0_1, [Score=88.2, Expect=2e-19]} {RNA1509_34618} {RNA1310_24897} {RNA815_5957}

Mlig455_027080 {REF} {Length: 2356} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=84.5]} {Human: ENSG00000177108, ZDHHC22, zinc finger DHHC-type containing 22, [RH, Score=79.7, Expect=2e-16]} {Mouse: ENSMUSG00000048483, Zdhhc22, zinc finger, DHHC-type containing 22, [RH, Score=85.5, Expect=1e-18]} {Dmel: FBgn0034729, CG10344, [RH, Score=97.8, Expect=6e-23]} {Celegans: WBGene00019344, dhhc-10, Palmitoyltransferase, [RH, Score=105, Expect=2e-25]} {Smed: dd_Smed_v6_13359_0_1, dd_Smed_v6_13359_0_1, [Score=85.5, Expect=3e-18]} {RNA1509_34618, RNA1509_54149} {RNA1310_26262, RNA1509_54149} {RNA1509_54149, RNA815_5957}
6. MligTC455_30348 10872 226.5 Mlig455_022281

Neo: -

Age: Up-Down-Up

TUBB4B 0.989 - - - - 0.989 - Mlig455_022281 {REF} {Length: 1685} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=232.0]; Tubulin C-terminal domain [PF03953.19, score=144.9]; Misato Segment II tubulin-like domain [PF10644.11, score=24.4]} {Human: ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [RH, Score=922, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [RH, Score=910, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [RH, Score=908, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000196230, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000235067, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000229684, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [RH, Score=905, Expect=0.0]} {Mouse: ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [RH, Score=922, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [RH, Score=910, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [RH, Score=908, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [RH, Score=905, Expect=0.0]; ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [RH, Score=905, Expect=0.0]} {Dmel: FBgn0284243, betaTub56D, beta-Tubulin at 56D, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=860, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, dd_Smed_v6_83_0_3, [RH, Score=919, Expect=0.0]} {RNA1509_21, RNA1509_4990} {RNA1310_17208, RNA1509_4990} {RNA1509_4990, RNA815_4202.1}
7. MligTC455_24677 833 17.35 Mlig455_015313, Mlig455_016514, Mlig455_032994, Mlig455_047370, Mlig455_062075

Neo: -

Age: -

0.976 - - 0.976 - - -

Mlig455_015313 {REF} {Length: 568} {NoTransDecoderORF} {RNA1509_42039} {RNA1310_86683} {RNA815_9379}

Mlig455_016514 {REF} {Length: 435} {NoTransDecoderORF} {RNA1509_42039} {RNA1310_86683} {RNA815_9379}

Mlig455_032994 {REF} {Length: 425} {NoTransDecoderORF} {RNA1509_42039} {RNA1310_86683} {RNA815_9379}

Mlig455_047370 {REF} {Length: 425} {NoTransDecoderORF} {RNA1509_42039} {RNA1310_86683} {RNA815_9379}

Mlig455_062075 {REF} {Length: 678} {TRANSSPLICED} {RNA1509_42039} {RNA1310_86683} {RNA815_9379}
8. MligTC455_52987 980 20.41 Mlig455_054765

Neo: -

Age: logFC(26M/2M)=-0.758

Region-enriched R2: 2.188/0.00290

CALM3 0.972 - - 0.972 - - - Mlig455_054765 {REF} {Length: 759} {Pfam: EF hand [PF00036.34, score=109.0]; EF-hand domain pair [PF13499.8, score=105.1]; EF-hand domain [PF13405.8, score=89.0]; EF-hand domain pair [PF13833.8, score=88.7]; EF hand [PF13202.8, score=71.3]; EF-hand domain [PF14658.8, score=42.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=39.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=28.8]; EF-hand domain [PF08976.13, score=27.1]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=164, Expect=3e-52]; ENSG00000198668, CALM1, calmodulin 1, [Score=164, Expect=3e-52]; ENSG00000143933, CALM2, calmodulin 2, [Score=164, Expect=3e-52]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=164, Expect=2e-52]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=164, Expect=2e-52]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=164, Expect=2e-52]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=159, Expect=2e-50]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=164, Expect=3e-52]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=2e-52]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=164, Expect=2e-52]} {RNA1509_6221} {RNA1310_49203} {RNA815_22421}
9. MligTC455_45780 1319 27.49 Mlig455_034009, Mlig455_060388

Neo: -

Age: -

Region-enriched R4: 1.293/0.00518

Regeneration-upregulated BL: 1.725

Regeneration-enriched BL: 1.725

STRN3 0.967 - - - 0.967 - -

Mlig455_034009 {REF} {Length: 4926} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.2]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=313, Expect=9e-94]; ENSG00000115808, STRN, striatin, [Score=308, Expect=4e-92]; ENSG00000090372, STRN4, striatin 4, [Score=301, Expect=8e-91]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=485, Expect=3e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=6e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=4e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=3e-77]} {RNA1509_18009, RNA1509_4159, RNA1509_8508} {RNA1310_1645.1, RNA1509_18009, RNA1509_8508} {RNA1509_18009, RNA1509_8508, RNA815_5062}

Mlig455_060388 {REF} {Length: 5034} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.0]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=312, Expect=2e-93]; ENSG00000115808, STRN, striatin, [Score=308, Expect=8e-92]; ENSG00000090372, STRN4, striatin 4, [Score=300, Expect=2e-90]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=484, Expect=7e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=8e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=6e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=6e-77]} {RNA1509_41485, RNA1509_4159} {RNA1310_1645.1, RNA1509_41485, RNA1509_4159} {RNA1509_41485, RNA1509_4159, RNA815_5062}
10. MligTC455_46306 458 9.55 Mlig455_059663

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.355

Region-enriched R2: 2.126/0.00026

PTBP3 0.959 - - 0.959 - - - Mlig455_059663 {REF} {Length: 3410} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=151.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=112.0]; RRM-like domain [PF11835.10, score=52.5]; Occluded RNA-recognition motif [PF16842.7, score=43.5]; RNA binding motif [PF08777.13, score=18.6]} {Human: ENSG00000119314, PTBP3, polypyrimidine tract binding protein 3, [RH, Score=466, Expect=9e-157]; ENSG00000011304, PTBP1, polypyrimidine tract binding protein 1, [RH, Score=463, Expect=1e-155]; ENSG00000117569, PTBP2, polypyrimidine tract binding protein 2, [RH, Score=462, Expect=9e-156]} {Mouse: ENSMUSG00000028382, Ptbp3, polypyrimidine tract binding protein 3, [RH, Score=468, Expect=2e-157]; ENSMUSG00000006498, Ptbp1, polypyrimidine tract binding protein 1, [RH, Score=468, Expect=1e-157]; ENSMUSG00000028134, Ptbp2, polypyrimidine tract binding protein 2, [RH, Score=465, Expect=6e-157]} {Dmel: FBgn0011224, heph, hephaestus, [RH, Score=442, Expect=2e-143]} {Celegans: WBGene00004207, ptb-1, PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1b, [RH, Score=422, Expect=4e-139]} {Smed: dd_Smed_v6_14748_0_1, dd_Smed_v6_14748_0_1, [RH, Score=340, Expect=2e-107]} {RNA1509_7362} {RNA1310_5320} {RNA815_1604}
11. MligTC455_45911 1293 26.94 Mlig455_066085, Mlig455_066131

Neo: -

Age: logFC(26M/2M)=-0.248

PCIF1 0.957 - - - 0.957 - -

Mlig455_066085 {REF} {Length: 4933} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=305.8]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [Score=90.9, Expect=7e-18]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [Score=89.7, Expect=1e-17]} {Dmel: FBgn0037021, CG11399, [Score=70.1, Expect=1e-11]} {Smed: dd_Smed_v6_4647_0_1, dd_Smed_v6_4647_0_1, [Score=216, Expect=5e-61]} {RNA1509_32528, RNA1509_38598} {RNA1310_7191, RNA1509_38598} {RNA1509_38598, RNA815_4803}

Mlig455_066131 {REF} {Length: 3694} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=205.7]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [Score=90.9, Expect=4e-18]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [Score=89.4, Expect=7e-18]} {Dmel: FBgn0037021, CG11399, [Score=70.1, Expect=7e-12]} {Smed: dd_Smed_v6_4647_0_1, dd_Smed_v6_4647_0_1, [Score=213, Expect=8e-61]} {RNA1509_29828, RNA1509_45567} {RNA1310_7191, RNA1509_45567} {RNA1509_45567, RNA815_4803}
12. MligTC455_23091 466 9.72 Mlig455_021894

Neo: -

Age: -

0.953 - - - 0.953 - - Mlig455_021894 {REF} {Length: 4939} {TRANSSPLICED} {RNA1509_12504, RNA1509_19502} {RNA1310_3897, RNA1509_12504, RNA1509_19502} {RNA1509_12504, RNA1509_19502, RNA815_21452}
13. MligTC455_41582 148 3.09 Mlig455_001197

Neo: -

Age: -

0.952 - - 0.952 - - - Mlig455_001197 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_12950} {RNA1310_4155.2} {RNA815_30817}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA