Data search
Results for MligTC455_45780
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45780 | 1319 | 27.49 | Mlig455_034009, Mlig455_060388 | Neo: - Age: - Region-enriched R4: 1.293/0.00518 Regeneration-upregulated BL: 1.725 Regeneration-enriched BL: 1.725 |
STRN3 | Mlig455_034009 {REF} {Length: 4926} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.2]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=313, Expect=9e-94]; ENSG00000115808, STRN, striatin, [Score=308, Expect=4e-92]; ENSG00000090372, STRN4, striatin 4, [Score=301, Expect=8e-91]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=485, Expect=3e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=6e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=4e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=3e-77]} {RNA1509_18009, RNA1509_4159, RNA1509_8508} {RNA1310_1645.1, RNA1509_18009, RNA1509_8508} {RNA1509_18009, RNA1509_8508, RNA815_5062} Mlig455_060388 {REF} {Length: 5034} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.0]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=312, Expect=2e-93]; ENSG00000115808, STRN, striatin, [Score=308, Expect=8e-92]; ENSG00000090372, STRN4, striatin 4, [Score=300, Expect=2e-90]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=484, Expect=7e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=8e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=6e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=6e-77]} {RNA1509_41485, RNA1509_4159} {RNA1310_1645.1, RNA1509_41485, RNA1509_4159} {RNA1509_41485, RNA1509_4159, RNA815_5062} |
Cumulative graph for MligTC455_45780
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.225 | 5.033 | 0.12721 | 0.72333 | |
| RegionR2 | 0.14 | 5.033 | 0.71211 | 1.00000 | |
| RegionR3 | -0.157 | 5.033 | 0.63971 | 1.00000 | |
| RegionR4 | 1.293 | 5.033 | 0.00042 | 0.00518 | |
| RegionR5 | 0.39 | 5.033 | 0.17931 | 0.45531 | |
| RegionR6 | 0.186 | 5.033 | 0.55827 | 1.00000 | |
| RegionR7 | -0.256 | 5.033 | 0.55786 | 1.00000 | |
| RegionR8 | -2.822 | 5.033 | 0.00032 | 0.01996 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.905 | 5.033 | 0.11016 | 0.83442 | |
| RegenerationR2 | 0.231 | 5.033 | 0.44896 | 0.84571 | |
| RegenerationR3 | -0.062 | 5.033 | 0.86002 | 1.00000 | |
| RegenerationR4 | -0.555 | 5.033 | 0.10814 | 0.50678 | |
| RegenerationR5 | 0.002 | 5.033 | 0.99632 | 1.00000 | |
| RegenerationR6 | 0.182 | 5.033 | 0.59454 | 0.86603 | |
| RegenerationBL | 1.725 | 5.033 | 0.00009 | 0.00433 | Specific for BL: 1.725 |
| RegenerationTP | 1.405 | 5.033 | 0.01491 | 0.20894 |
Genes with expression patterns similar to MligTC455_45780
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45780 | 1319 | 27.49 | Mlig455_034009, Mlig455_060388 | Neo: - Age: - Region-enriched R4: 1.293/0.00518 Regeneration-upregulated BL: 1.725 Regeneration-enriched BL: 1.725 |
STRN3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034009 {REF} {Length: 4926} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.2]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=313, Expect=9e-94]; ENSG00000115808, STRN, striatin, [Score=308, Expect=4e-92]; ENSG00000090372, STRN4, striatin 4, [Score=301, Expect=8e-91]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=485, Expect=3e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=6e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=4e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=3e-77]} {RNA1509_18009, RNA1509_4159, RNA1509_8508} {RNA1310_1645.1, RNA1509_18009, RNA1509_8508} {RNA1509_18009, RNA1509_8508, RNA815_5062} Mlig455_060388 {REF} {Length: 5034} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.0]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=312, Expect=2e-93]; ENSG00000115808, STRN, striatin, [Score=308, Expect=8e-92]; ENSG00000090372, STRN4, striatin 4, [Score=300, Expect=2e-90]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=484, Expect=7e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=8e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=6e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=6e-77]} {RNA1509_41485, RNA1509_4159} {RNA1310_1645.1, RNA1509_41485, RNA1509_4159} {RNA1509_41485, RNA1509_4159, RNA815_5062} |
| 2. | MligTC455_36809 | 2545 | 53.03 | Mlig455_031988, Mlig455_032040 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.264 Regeneration-upregulated BL: 1.259 Regeneration-enriched BL: 1.259 |
2.45 | - | 0.757 | - | 0.969 | - | 0.724 | Mlig455_031988 {REF} {Length: 5660} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_46072, RNA1509_8892} {RNA1310_3692.1, RNA1509_46072} {RNA1509_46072, RNA815_13257.1} Mlig455_032040 {REF} {Length: 5830} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_8892} {RNA1310_3692.1, RNA1509_8892} {RNA1509_8892, RNA815_13257.1} |
|
| 3. | MligTC455_36808 | 1241 | 25.85 | Mlig455_031991 | Neo: - Age: - |
2.425 | - | 0.763 | - | 0.953 | - | 0.709 | Mlig455_031991 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA1509_8892} {RNA1310_3692.1, RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA815_13257.1} | |
| 4. | MligTC455_24878 | 969 | 20.2 | Mlig455_045252 | Neo: - Age: logFC(26M/2M)=1.306 Region-enriched R5: 1.363/0.04356 |
LIMS2 | 1.813 | - | - | - | 0.963 | 0.850 | - | Mlig455_045252 {REF} {Length: 1439} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=76.2]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=92.0, Expect=3e-21]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [Score=87.8, Expect=1e-19]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [Score=87.8, Expect=1e-19]} {Mouse: ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=88.6, Expect=3e-20]; ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=88.2, Expect=6e-20]} {Dmel: FBgn0020249, stck, steamer duck, [Score=101, Expect=4e-25]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=107, Expect=2e-27]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=108, Expect=4e-28]} {RNA1509_24514} {RNA1310_13269.1} {RNA815_4936.1} |
| 5. | MligTC455_24879 | 857 | 17.85 | Mlig455_069172 | Neo: Int S/G2/M Age: - |
LIMS2 | 1.793 | - | - | - | 0.975 | 0.818 | - | Mlig455_069172 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=202.3]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [RH, Score=369, Expect=6e-126]; ENSG00000256977, LIMS3, LIM zinc finger domain containing 3, [RH, Score=368, Expect=4e-125]; ENSG00000256671, LIMS4, LIM zinc finger domain containing 4, [RH, Score=368, Expect=4e-125]; ENSG00000169756, LIMS1, LIM zinc finger domain containing 1, [RH, Score=365, Expect=2e-124]} {Mouse: ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [RH, Score=372, Expect=1e-126]; ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [RH, Score=358, Expect=4e-122]} {Dmel: FBgn0020249, stck, steamer duck, [RH, Score=387, Expect=2e-133]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [RH, Score=377, Expect=1e-129]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [RH, Score=427, Expect=2e-149]} {RNA1509_58964} {RNA1310_13680.2} {RNA815_4936.1} |
| 6. | MligTC455_26646 | 1270 | 26.47 | Mlig455_036193, Mlig455_036200 | Neo: Irradiation Age: - Region-enriched R4: 2.027/0.00054 Regeneration-downregulated R4: -2.228 Regeneration-depleted R4: -2.228 |
GIPC3, PTPN23 | 1.747 | - | - | - | 0.958 | - | 0.789 | Mlig455_036193 {REF} {Length: 6626} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=62.9]} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=58.9, Expect=7e-08]} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=70.9, Expect=1e-11]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=99.8, Expect=1e-20]} {Celegans: WBGene00021507, Y41D4A.5, Protein-tyrosine-phosphatase, [Score=54.7, Expect=3e-07]} {Smed: dd_Smed_v6_3351_0_2, dd_Smed_v6_3351_0_2, [Score=126, Expect=5e-29]} {RNA1509_13027, RNA1509_26323, RNA1509_55968} {RNA1310_12276.2, RNA1509_13027, RNA1509_26323, RNA1509_55968} {RNA1509_13027, RNA1509_26323, RNA1509_55968, RNA815_6413} Mlig455_036200 {REF} {Length: 8454} {Pfam: BRO1-like domain [PF03097.20, score=305.8]; ALIX V-shaped domain binding to HIV [PF13949.8, score=96.6]; Protein-tyrosine phosphatase [PF00102.29, score=75.4]} {Human: ENSG00000076201, PTPN23, protein tyrosine phosphatase, non-receptor type 23, [RH, Score=408, Expect=1e-115]} {Mouse: ENSMUSG00000036057, Ptpn23, protein tyrosine phosphatase, non-receptor type 23, [RH, Score=412, Expect=5e-117]} {Dmel: FBgn0036448, mop, myopic, [RH, Score=371, Expect=1e-103]} {Celegans: WBGene00001215, ego-2, Enhancer of Glp-One (Glp-1); Enhancer of glp-1, [RH, Score=260, Expect=1e-69]} {Smed: dd_Smed_v6_3351_0_1, dd_Smed_v6_3351_0_1, [RH, Score=424, Expect=2e-121]} {RNA1509_6410} {RNA1310_2882.1} {RNA815_3253.1} |
| 7. | MligTC455_35517 | 1775 | 36.99 | Mlig455_058832 | Neo: - Age: - |
SPEN | 0.969 | - | - | - | 0.969 | - | - | Mlig455_058832 {REF} {Length: 6056} {Pfam: SPOC domain [PF07744.15, score=114.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=81.8]; Occluded RNA-recognition motif [PF16842.7, score=34.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=208, Expect=2e-53]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=209, Expect=1e-53]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=204, Expect=3e-52]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=97.8, Expect=6e-20]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [Score=187, Expect=2e-47]} {RNA1509_1106, RNA1509_18970, RNA1509_57047} {RNA1310_665, RNA1509_1106, RNA1509_18970, RNA1509_57047} {RNA1509_1106, RNA1509_18970, RNA1509_57047, RNA815_665} |
| 8. | MligTC455_37133 | 268 | 5.59 | Mlig455_043392, Mlig455_043417 | Neo: - Age: Up-Down-Up |
0.967 | - | - | - | 0.967 | - | - | Mlig455_043392 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_19221} {RNA815_21047} Mlig455_043417 {REF} {Length: 2334} {NoTransDecoderORF} {RNA1509_57581} {RNA1310_19221} {RNA815_8982.1} |
|
| 9. | MligTC455_33116 | 1217 | 25.35 | Mlig455_042734, Mlig455_063152 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.296/0.01110 |
LDB2 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_042734 {REF} {Length: 5440} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=81.8]; DSBA-like thioredoxin domain [PF01323.22, score=52.4]; LIM interaction domain (LID) [PF17916.3, score=24.7]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=194, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=190, Expect=1e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=170, Expect=6e-45]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=82.4, Expect=4e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=174, Expect=2e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} Mlig455_063152 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=78.1]; LIM interaction domain (LID) [PF17916.3, score=24.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=187, Expect=4e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=172, Expect=6e-46]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=172, Expect=7e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} |
| 10. | MligTC455_52802 | 1469 | 30.6 | Mlig455_012037 | Neo: - Age: - Regeneration-upregulated BL: 2.011 Regeneration-enriched BL: 2.011 |
PPIG | 0.962 | - | - | - | - | - | 0.962 | Mlig455_012037 {REF} {Length: 5427} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=156.7]} {Human: ENSG00000138398, PPIG, peptidylprolyl isomerase G, [RH, Score=248, Expect=1e-68]} {Mouse: ENSMUSG00000032525, Nktr, natural killer tumor recognition sequence, [RH, Score=259, Expect=4e-71]; ENSMUSG00000042133, Ppig, peptidyl-prolyl isomerase G (cyclophilin G), [RH, Score=249, Expect=5e-69]} {Dmel: FBgn0039581, Moca-cyp, [RH, Score=264, Expect=7e-73]} {Celegans: WBGene00000884, cyn-8, Peptidyl-prolyl cis-trans isomerase 8, [RH, Score=209, Expect=2e-58]} {Smed: dd_Smed_v6_2064_0_4, dd_Smed_v6_2064_0_4, [RH, Score=290, Expect=3e-82]} {RNA1509_11712, RNA1509_47463, RNA1509_57806} {RNA1310_4222.1, RNA1509_11712, RNA1509_47463, RNA1509_57806} {RNA1509_11712, RNA1509_47463, RNA1509_57806, RNA815_4262} |
| 11. | MligTC455_32743 | 1959 | 40.8 | Mlig455_067917 | Neo: - Age: Up-Down-Up |
KY | 0.953 | - | - | - | 0.953 | - | - | Mlig455_067917 {REF} {Length: 6701} {TRANSSPLICED} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=37.8]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=143, Expect=3e-34]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=147, Expect=9e-36]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=281, Expect=4e-79]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=250, Expect=4e-72]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_1987} {RNA1310_669} {RNA815_5918.1} |