TomoSeq data search

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Results for MligTC455_37564

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37564

735

15.30

Mlig455_056763

Neo: -

Age: -

Region-enriched R5: 1.044/0.02419

YLPM1

Mlig455_056763 {REF} {Length: 3645} {TRANSSPLICED} {Pfam: AAA ATPase domain [PF13191.8, score=23.2]} {Human: ENSG00000119596, YLPM1, YLP motif containing 1, [RH, Score=206, Expect=2e-53]} {Mouse: ENSMUSG00000021244, Ylpm1, YLP motif containing 1, [RH, Score=219, Expect=1e-57]} {Dmel: FBgn0052685, ZAP3, [RH, Score=216, Expect=6e-57]} {Smed: dd_Smed_v6_6970_0_1, dd_Smed_v6_6970_0_1, [RH, Score=191, Expect=1e-51]} {RNA1509_21173} {RNA1310_4180.1} {RNA815_3851.1}

Cumulative graph for MligTC455_37564

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.964	4.255	0.40466	1.00000
RegionR2	0.794	4.255	0.11355	0.41662
RegionR3	0.511	4.255	0.21809	0.75921
RegionR4	0.226	4.255	0.58353	0.89962
RegionR5	1.044	4.255	0.00310	0.02419
RegionR6	0.618	4.255	0.14357	0.67866
RegionR7	-0.679	4.255	0.28589	0.91950
RegionR8	-1.55	4.255	0.08852	0.56277

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.651	4.255	0.13266	0.86610
RegenerationR2	0.246	4.255	0.50100	0.87198
RegenerationR3	0.451	4.255	0.26997	0.70421
RegenerationR4	0.64	4.255	0.11395	0.51664
RegenerationR5	0.275	4.255	0.43953	0.82397
RegenerationR6	0.445	4.255	0.27413	0.62353
RegenerationBL	0.996	4.255	0.08292	0.33700
RegenerationTP	1.156	4.255	0.10195	0.49606

Genes with expression patterns similar to MligTC455_37564

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37564	735	15.3	Mlig455_056763	Neo: - Age: - Region-enriched R5: 1.044/0.02419	YLPM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056763 {REF} {Length: 3645} {TRANSSPLICED} {Pfam: AAA ATPase domain [PF13191.8, score=23.2]} {Human: ENSG00000119596, YLPM1, YLP motif containing 1, [RH, Score=206, Expect=2e-53]} {Mouse: ENSMUSG00000021244, Ylpm1, YLP motif containing 1, [RH, Score=219, Expect=1e-57]} {Dmel: FBgn0052685, ZAP3, [RH, Score=216, Expect=6e-57]} {Smed: dd_Smed_v6_6970_0_1, dd_Smed_v6_6970_0_1, [RH, Score=191, Expect=1e-51]} {RNA1509_21173} {RNA1310_4180.1} {RNA815_3851.1}
2.	MligTC455_25068	735	15.3	Mlig455_003064	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.528	DDX11	2.522	-	-	-	0.746	0.951	0.825	Mlig455_003064 {REF} {Length: 2104} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=176.2]; Ku70/Ku80 beta-barrel domain [PF02735.18, score=161.6]; DEAD_2 [PF06733.17, score=133.8]; Ku70/Ku80 N-terminal alpha/beta domain [PF03731.17, score=87.0]; Ku70/Ku80 C-terminal arm [PF03730.16, score=29.3]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [RH, Score=456, Expect=2e-142]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=474, Expect=9e-149]} {Dmel: FBgn0026876, CG11403, [RH, Score=252, Expect=1e-69]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=372, Expect=3e-112]} {Smed: dd_Smed_v6_19858_0_2, dd_Smed_v6_19858_0_2, [Score=367, Expect=2e-110]} {RNA1509_4805} {RNA1310_12398.1} {RNA815_4398}
3.	MligTC455_32764	824	17.17	Mlig455_037698, Mlig455_046357	Neo: - Age: Up-Down-Up	TELO2	2.517	0.783	-	-	0.776	0.958	-	Mlig455_037698 {REF} {Length: 4263} {Pfam: Telomere length regulation protein [PF10193.11, score=78.0]} {Human: ENSG00000100726, TELO2, telomere maintenance 2, [RH, Score=109, Expect=9e-25]} {RNA1509_29557} {RNA1310_3036} {RNA815_3895} Mlig455_046357 {REF} {Length: 3326} {TRANSSPLICED} {Pfam: Telomere length regulation protein [PF10193.11, score=76.8]} {Human: ENSG00000100726, TELO2, telomere maintenance 2, [RH, Score=108, Expect=1e-23]} {RNA1509_29557} {RNA1310_2707} {RNA815_3895}
4.	MligTC455_46364	391	8.14	Mlig455_010769	Neo: Int S/G2/M Age: - Region-enriched R5: 1.366/0.01601	RCC1L	1.783	0.813	-	-	-	-	0.970	Mlig455_010769 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=136.1]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=68.6]} {Human: ENSG00000274523, RCC1L, RCC1 like, [RH, Score=221, Expect=5e-66]} {Mouse: ENSMUSG00000061979, Rcc1l, reculator of chromosome condensation 1 like, [RH, Score=236, Expect=4e-72]} {Dmel: FBgn0031286, CG3862, [RH, Score=247, Expect=2e-76]} {Celegans: WBGene00012370, W09G3.7, [RH, Score=166, Expect=2e-46]} {Smed: dd_Smed_v6_7271_0_3, dd_Smed_v6_7271_0_3, [RH, Score=164, Expect=2e-45]} {RNA1509_25090} {RNA1310_14056} {RNA815_14642.1}
5.	MligTC455_49157	326	6.8	Mlig455_030476	Neo: Int S/G2/M Age: logFC(26M/2M)=0.534 Region-enriched R5: 1.722/0.00056	NTPCR	1.734	0.768	-	-	-	-	0.966	Mlig455_030476 {REF} {Length: 684} {TRANSSPLICED} {Pfam: NTPase [PF03266.17, score=129.5]; AAA domain [PF13604.8, score=29.5]; AAA domain [PF13401.8, score=27.8]; AAA ATPase domain [PF13191.8, score=25.0]; AAA domain [PF13238.8, score=24.0]; AAA domain [PF13521.8, score=21.3]; NACHT domain [PF05729.14, score=20.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=20.3]} {Human: ENSG00000135778, NTPCR, nucleoside-triphosphatase, cancer-related, [RH, Score=115, Expect=7e-32]} {Mouse: ENSMUSG00000031851, Ntpcr, nucleoside-triphosphatase, cancer-related, [RH, Score=107, Expect=8e-29]} {Dmel: FBgn0037046, CG10581, [RH, Score=95.5, Expect=3e-24]} {RNA1509_25758} {RNA1310_37079.1} {RNA815_20458.1}
6.	MligTC455_34044	238	4.95	Mlig455_012090	Neo: Int S/G2/M Age: -	HENMT1	1.723	-	0.955	-	-	-	0.768	Mlig455_012090 {REF} {Length: 3192} {TRANSSPLICED} {Human: ENSG00000162639, HENMT1, HEN methyltransferase 1, [RH, Score=169, Expect=8e-48]} {Mouse: ENSMUSG00000045662, Henmt1, HEN1 methyltransferase homolog 1 (Arabidopsis), [RH, Score=167, Expect=3e-47]} {Dmel: FBgn0033686, Hen1, Hen1 methyltransferase, [Score=145, Expect=3e-39]} {Celegans: WBGene00015349, henn-1, HEN1 (RNA 3'end methyltransferase) of Nematode, [RH, Score=98.6, Expect=3e-22]} {Smed: dd_Smed_v6_8622_0_1, dd_Smed_v6_8622_0_1, [RH, Score=120, Expect=4e-30]} {RNA1509_30430} {RNA1310_19962.1} {RNA815_9382}
7.	MligTC455_42497	427	8.9	Mlig455_025883, Mlig455_062264	Neo: - Age: - Region-enriched R5: 1.978/0.02600	SOCS6	1.703	-	-	0.751	-	-	0.952	Mlig455_025883 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.0]; SH2 domain [PF00017.26, score=26.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=77.4, Expect=4e-15]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=76.6, Expect=4e-15]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=77.0, Expect=3e-15]} {Celegans: WBGene00009556, F39B2.5, [Score=45.4, Expect=1e-05]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=94.4, Expect=1e-21]} {RNA1509_29098} {RNA1310_16429.1} {RNA815_12857} Mlig455_062264 {REF} {Length: 1811} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.1]; SH2 domain [PF00017.26, score=28.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=80.9, Expect=3e-16]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=80.5, Expect=2e-16]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=79.0, Expect=7e-16]} {Celegans: WBGene00009556, F39B2.5, [Score=47.0, Expect=4e-06]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=95.1, Expect=5e-22]} {RNA1509_29098} {RNA1310_16429.1, RNA1509_29098} {RNA1509_29098, RNA815_12857}
8.	MligTC455_17744	152	3.16	Mlig455_004612	Neo: - Age: logFC(26M/2M)=-0.493 Region-enriched R2: 4.143/0.01116	INTS2	1.7	0.740	0.960	-	-	-	-	Mlig455_004612 {REF} {Length: 5765} {Pfam: Integrator complex subunit 2 [PF14750.8, score=434.4]} {Human: ENSG00000108506, INTS2, integrator complex subunit 2, [Score=168, Expect=2e-41]} {Mouse: ENSMUSG00000018068, Ints2, integrator complex subunit 2, [Score=168, Expect=1e-41]} {Dmel: FBgn0030858, IntS2, Integrator 2, [Score=162, Expect=3e-40]} {Smed: dd_Smed_v6_7197_0_2, dd_Smed_v6_7197_0_2, [Score=187, Expect=6e-48]} {RNA1509_16977} {RNA1310_2572} {RNA815_13711}
9.	MligTC455_40487	472	9.84	Mlig455_013799	Neo: Irradiation Age: -	RBM19	1.682	-	0.716	-	-	-	0.966	Mlig455_013799 {REF} {Length: 3052} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=191.3]; Occluded RNA-recognition motif [PF16842.7, score=20.2]} {Human: ENSG00000122965, RBM19, RNA binding motif protein 19, [RH, Score=258, Expect=2e-73]} {Mouse: ENSMUSG00000029594, Rbm19, RNA binding motif protein 19, [RH, Score=264, Expect=3e-76]} {Dmel: FBgn0036018, CG3335, [RH, Score=236, Expect=3e-66]} {Celegans: WBGene00004315, rbd-1, RBD (RNA binding domain) protein, [RH, Score=280, Expect=3e-82]} {Smed: dd_Smed_v6_7697_0_1, dd_Smed_v6_7697_0_1, [RH, Score=259, Expect=2e-77]} {RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1310_6427.1, RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1509_10471, RNA1509_26507, RNA1509_46812, RNA815_2473}
10.	MligTC455_16741	471	9.8	Mlig455_064961	Neo: - Age: - Region-enriched R5: 1.080/0.00696	NF2	1.651	-	-	-	-	0.700	0.951	Mlig455_064961 {REF} {Length: 2815} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=50.8]; FERM N-terminal domain [PF09379.12, score=46.2]; FERM central domain [PF00373.20, score=33.2]; Ezrin/radixin/moesin family [PF00769.21, score=30.2]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=248, Expect=2e-73]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=250, Expect=2e-74]} {Dmel: FBgn0086384, Mer, Merlin, [Score=259, Expect=2e-77]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_1131_0_1, dd_Smed_v6_1131_0_1, [Score=206, Expect=9e-59]} {RNA1509_28763, RNA1509_43567} {RNA1310_9789, RNA1509_28763, RNA1509_43567} {RNA1509_28763, RNA1509_43567, RNA815_21216}
11.	MligTC455_46149	747	15.56	Mlig455_023545, Mlig455_023652, Mlig455_023673	Neo: - Age: -	COQ4	0.954	-	-	-	-	-	0.954	Mlig455_023545 {REF} {Length: 1302} {TRANSSPLICED} {Pfam: Coenzyme Q (ubiquinone) biosynthesis protein Coq4 [PF05019.15, score=259.4]} {Human: ENSG00000167113, COQ4, coenzyme Q4, [RH, Score=214, Expect=1e-68]} {Mouse: ENSMUSG00000026798, Coq4, coenzyme Q4, [RH, Score=209, Expect=2e-66]} {Dmel: FBgn0052174, CG32174, [RH, Score=201, Expect=2e-63]} {Celegans: WBGene00000764, coq-4, Ubiquinone biosynthesis protein coq-4, mitochondrial, [RH, Score=179, Expect=2e-55]} {Smed: dd_Smed_v6_8912_0_1, dd_Smed_v6_8912_0_1, [RH, Score=254, Expect=1e-84]} {RNA1509_22888, RNA1509_25136} {RNA1310_24601, RNA1509_22888} {RNA1509_22888, RNA815_12943.1} Mlig455_023652 {REF} {Length: 1639} {TRANSSPLICED} {Pfam: Coenzyme Q (ubiquinone) biosynthesis protein Coq4 [PF05019.15, score=262.1]} {Human: ENSG00000167113, COQ4, coenzyme Q4, [RH, Score=215, Expect=9e-69]} {Mouse: ENSMUSG00000026798, Coq4, coenzyme Q4, [RH, Score=208, Expect=4e-66]} {Dmel: FBgn0052174, CG32174, [RH, Score=200, Expect=5e-63]} {Celegans: WBGene00000764, coq-4, Ubiquinone biosynthesis protein coq-4, mitochondrial, [RH, Score=179, Expect=1e-55]} {Smed: dd_Smed_v6_8912_0_1, dd_Smed_v6_8912_0_1, [RH, Score=254, Expect=2e-84]} {RNA1509_25136} {RNA1310_24601, RNA1509_25136} {RNA1509_25136, RNA815_12943.1} Mlig455_023673 {REF} {Length: 1073} {TRANSSPLICED} {Pfam: Coenzyme Q (ubiquinone) biosynthesis protein Coq4 [PF05019.15, score=163.0]} {Human: ENSG00000167113, COQ4, coenzyme Q4, [Score=140, Expect=2e-40]} {Mouse: ENSMUSG00000026798, Coq4, coenzyme Q4, [Score=144, Expect=7e-42]} {Dmel: FBgn0052174, CG32174, [Score=130, Expect=8e-37]} {Celegans: WBGene00000764, coq-4, Ubiquinone biosynthesis protein coq-4, mitochondrial, [Score=115, Expect=2e-31]} {Smed: dd_Smed_v6_8912_0_1, dd_Smed_v6_8912_0_1, [Score=171, Expect=1e-52]} {RNA1509_25136} {RNA1310_24601} {RNA815_12943.1}
12.	MligTC455_32054	384	8.01	Mlig455_015060	Neo: - Age: -	C12orf66	0.952	-	-	-	-	0.952	-	Mlig455_015060 {REF} {Length: 1960} {TRANSSPLICED} {Pfam: KICSTOR complex C12orf66 like [PF09404.12, score=205.9]} {Human: ENSG00000174206, C12orf66, chromosome 12 open reading frame 66, [RH, Score=153, Expect=6e-41]} {Mouse: ENSMUSG00000053684, BC048403, cDNA sequence BC048403, [RH, Score=153, Expect=6e-41]} {Smed: dd_Smed_v6_6268_0_1, dd_Smed_v6_6268_0_1, [RH, Score=62.0, Expect=3e-10]} {RNA1509_56753} {RNA1310_18670.1} {RNA815_8138}
13.	MligTC455_46756	66	1.37	Mlig455_014914	Neo: - Age: Up-Down-Down	TBC1D25	0.951	-	-	-	-	-	0.951	Mlig455_014914 {REF} {Length: 4178} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=111.0]} {Human: ENSG00000068354, TBC1D25, TBC1 domain family member 25, [Score=218, Expect=1e-60]} {Mouse: ENSMUSG00000039201, Tbc1d25, TBC1 domain family, member 25, [Score=219, Expect=5e-61]} {Dmel: FBgn0034009, CG8155, [Score=238, Expect=4e-66]} {Celegans: WBGene00008444, tbc-14, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=125, Expect=7e-30]} {Smed: dd_Smed_v6_8922_0_1, dd_Smed_v6_8922_0_1, [Score=352, Expect=3e-110]} {RNA1509_44648} {RNA1310_5636} {RNA815_2249.1}

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