Data search
Results for MligTC455_40487
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40487 | 472 | 9.84 | Mlig455_013799 | Neo: Irradiation Age: - |
RBM19 | Mlig455_013799 {REF} {Length: 3052} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=191.3]; Occluded RNA-recognition motif [PF16842.7, score=20.2]} {Human: ENSG00000122965, RBM19, RNA binding motif protein 19, [RH, Score=258, Expect=2e-73]} {Mouse: ENSMUSG00000029594, Rbm19, RNA binding motif protein 19, [RH, Score=264, Expect=3e-76]} {Dmel: FBgn0036018, CG3335, [RH, Score=236, Expect=3e-66]} {Celegans: WBGene00004315, rbd-1, RBD (RNA binding domain) protein, [RH, Score=280, Expect=3e-82]} {Smed: dd_Smed_v6_7697_0_1, dd_Smed_v6_7697_0_1, [RH, Score=259, Expect=2e-77]} {RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1310_6427.1, RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1509_10471, RNA1509_26507, RNA1509_46812, RNA815_2473} |
Cumulative graph for MligTC455_40487
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.128 | 3.625 | 0.92459 | 1.00000 | |
| RegionR2 | -0.085 | 3.625 | 0.87576 | 1.00000 | |
| RegionR3 | -0.751 | 3.625 | 0.11689 | 0.59311 | |
| RegionR4 | 0.145 | 3.625 | 0.76010 | 1.00000 | |
| RegionR5 | 0.312 | 3.625 | 0.40481 | 0.76293 | |
| RegionR6 | 0.147 | 3.625 | 0.73784 | 1.00000 | |
| RegionR7 | -0.016 | 3.625 | 0.97954 | 1.00000 | |
| RegionR8 | 0.12 | 3.625 | 0.88690 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.197 | 3.625 | 0.90478 | 1.00000 | |
| RegenerationR2 | -0.24 | 3.625 | 0.58930 | 0.91091 | |
| RegenerationR3 | 0.726 | 3.625 | 0.14523 | 0.57248 | |
| RegenerationR4 | 0.099 | 3.625 | 0.82460 | 0.99545 | |
| RegenerationR5 | 0.719 | 3.625 | 0.07005 | 0.41563 | |
| RegenerationR6 | 0.865 | 3.625 | 0.05595 | 0.29681 | |
| RegenerationBL | 0.693 | 3.625 | 0.22026 | 0.56753 | |
| RegenerationTP | -0.333 | 3.625 | 0.64700 | 0.98741 |
Genes with expression patterns similar to MligTC455_40487
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40487 | 472 | 9.84 | Mlig455_013799 | Neo: Irradiation Age: - |
RBM19 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013799 {REF} {Length: 3052} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=191.3]; Occluded RNA-recognition motif [PF16842.7, score=20.2]} {Human: ENSG00000122965, RBM19, RNA binding motif protein 19, [RH, Score=258, Expect=2e-73]} {Mouse: ENSMUSG00000029594, Rbm19, RNA binding motif protein 19, [RH, Score=264, Expect=3e-76]} {Dmel: FBgn0036018, CG3335, [RH, Score=236, Expect=3e-66]} {Celegans: WBGene00004315, rbd-1, RBD (RNA binding domain) protein, [RH, Score=280, Expect=3e-82]} {Smed: dd_Smed_v6_7697_0_1, dd_Smed_v6_7697_0_1, [RH, Score=259, Expect=2e-77]} {RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1310_6427.1, RNA1509_10471, RNA1509_26507, RNA1509_46812} {RNA1509_10471, RNA1509_26507, RNA1509_46812, RNA815_2473} |
| 2. | MligTC455_33761 | 429 | 8.94 | Mlig455_016903 | Neo: Int S/G2/M Age: - |
2.567 | 0.824 | 0.772 | - | - | - | 0.971 | Mlig455_016903 {REF} {Length: 791} {NoTransDecoderORF} {RNA1509_46841} {RNA1310_27335} {RNA815_2544.1} | |
| 3. | MligTC455_03819 | 755 | 15.73 | Mlig455_048939 | Neo: - Age: logFC(26M/2M)=-0.252 Region-enriched R5: 1.144/0.00306 |
MIF | 1.866 | - | - | - | 0.977 | - | 0.889 | Mlig455_048939 {REF} {Length: 1020} {TRANSSPLICED} {Pfam: Macrophage migration inhibitory factor (MIF) [PF01187.20, score=112.3]; Tautomerase enzyme [PF01361.23, score=20.8]} {Human: ENSG00000276701, MIF, macrophage migration inhibitory factor, [RH, Score=101, Expect=1e-28]; ENSG00000240972, MIF, macrophage migration inhibitory factor, [RH, Score=101, Expect=1e-28]} {Mouse: ENSMUSG00000033307, Mif, macrophage migration inhibitory factor (glycosylation-inhibiting factor), [RH, Score=103, Expect=1e-29]} {Celegans: WBGene00003235, mif-2, MIF-like protein mif-2, [RH, Score=72.4, Expect=1e-17]} {Smed: dd_Smed_v6_2244_0_1, dd_Smed_v6_2244_0_1, [RH, Score=82.8, Expect=9e-22]} {RNA1509_13977, RNA1509_15828} {RNA1310_33607.2, RNA1509_13977, RNA1509_15828} {RNA1509_13977, RNA1509_15828, RNA815_16436.1} |
| 4. | MligTC455_10940 | 801 | 16.7 | Mlig455_037884, Mlig455_039044 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.524/0.00467 |
1.685 | - | - | 0.969 | - | - | 0.716 | Mlig455_037884 {REF} {Length: 3393} {Pfam: SWIB/MDM2 domain [PF02201.20, score=78.2]; DEK C terminal domain [PF08766.13, score=53.3]} {Dmel: FBgn0035370, Non2, Novel nucleolar protein 2, [RH, Score=91.3, Expect=8e-22]} {Celegans: WBGene00020779, T24G10.2, [RH, Score=75.5, Expect=9e-16]} {Smed: dd_Smed_v6_7810_0_1, dd_Smed_v6_7810_0_1, [RH, Score=115, Expect=4e-31]} {RNA1509_29038} {RNA1310_28106.2} {RNA815_10460} Mlig455_039044 {REF} {Length: 3029} {Pfam: SWIB/MDM2 domain [PF02201.20, score=78.2]; DEK C terminal domain [PF08766.13, score=53.3]} {Dmel: FBgn0035370, Non2, Novel nucleolar protein 2, [RH, Score=91.3, Expect=8e-22]} {Celegans: WBGene00020779, T24G10.2, [RH, Score=75.9, Expect=9e-16]} {Smed: dd_Smed_v6_7810_0_1, dd_Smed_v6_7810_0_1, [RH, Score=115, Expect=4e-31]} {RNA1509_29038} {RNA1310_28106.1, RNA1509_29038} {RNA1509_29038, RNA815_10460} |
|
| 5. | MligTC455_37564 | 735 | 15.3 | Mlig455_056763 | Neo: - Age: - Region-enriched R5: 1.044/0.02419 |
YLPM1 | 1.682 | - | 0.716 | - | - | - | 0.966 | Mlig455_056763 {REF} {Length: 3645} {TRANSSPLICED} {Pfam: AAA ATPase domain [PF13191.8, score=23.2]} {Human: ENSG00000119596, YLPM1, YLP motif containing 1, [RH, Score=206, Expect=2e-53]} {Mouse: ENSMUSG00000021244, Ylpm1, YLP motif containing 1, [RH, Score=219, Expect=1e-57]} {Dmel: FBgn0052685, ZAP3, [RH, Score=216, Expect=6e-57]} {Smed: dd_Smed_v6_6970_0_1, dd_Smed_v6_6970_0_1, [RH, Score=191, Expect=1e-51]} {RNA1509_21173} {RNA1310_4180.1} {RNA815_3851.1} |
| 6. | MligTC455_41454 | 716 | 14.91 | Mlig455_053778 | Neo: Germline Age: Up-Down-Down Region-enriched R4: 1.532/0.02646 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_053778 {REF} {Length: 2073} {TRANSSPLICED} {RNA1509_47416, RNA1509_55932} {RNA1310_11939.1, RNA1509_47416, RNA1509_55932} {RNA1509_47416, RNA1509_55932, RNA815_5211.1} | |
| 7. | MligTC455_16741 | 471 | 9.8 | Mlig455_064961 | Neo: - Age: - Region-enriched R5: 1.080/0.00696 |
NF2 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_064961 {REF} {Length: 2815} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=50.8]; FERM N-terminal domain [PF09379.12, score=46.2]; FERM central domain [PF00373.20, score=33.2]; Ezrin/radixin/moesin family [PF00769.21, score=30.2]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=248, Expect=2e-73]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=250, Expect=2e-74]} {Dmel: FBgn0086384, Mer, Merlin, [Score=259, Expect=2e-77]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_1131_0_1, dd_Smed_v6_1131_0_1, [Score=206, Expect=9e-59]} {RNA1509_28763, RNA1509_43567} {RNA1310_9789, RNA1509_28763, RNA1509_43567} {RNA1509_28763, RNA1509_43567, RNA815_21216} |
| 8. | MligTC455_40715 | 961 | 20.02 | Mlig455_026497 | Neo: - Age: - |
TMEM35A | 0.953 | - | - | - | - | - | 0.953 | Mlig455_026497 {REF} {Length: 1174} {TRANSSPLICED} {Human: ENSG00000126950, TMEM35A, transmembrane protein 35A, [RH, Score=73.9, Expect=1e-16]} {Mouse: ENSMUSG00000033578, Tmem35a, transmembrane protein 35A, [RH, Score=76.3, Expect=1e-17]} {Dmel: FBgn0025712, CG13920, [RH, Score=85.5, Expect=2e-21]} {Smed: dd_Smed_v6_5832_0_1, dd_Smed_v6_5832_0_1, [RH, Score=198, Expect=1e-65]} {RNA1509_28599, RNA1509_43953, RNA1509_48669} {RNA1310_30016, RNA1509_28599, RNA1509_43953, RNA1509_48669} {RNA1509_28599, RNA1509_43953, RNA1509_48669, RNA815_13410} |
| 9. | MligTC455_50131 | 6428 | 133.92 | Mlig455_026057, Mlig455_037302 | Neo: Neoblast Age: - |
PFDN1 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_026057 {REF} {Length: 770} {Pfam: Prefoldin subunit [PF01920.22, score=62.9]} {Human: ENSG00000113068, PFDN1, prefoldin subunit 1, [RH, Score=92.0, Expect=1e-24]} {Mouse: ENSMUSG00000024346, Pfdn1, prefoldin 1, [RH, Score=91.3, Expect=2e-24]} {Dmel: FBgn0031776, Pfdn1, Prefoldin 1, [RH, Score=70.5, Expect=1e-16]} {Celegans: WBGene00007443, pfd-1, Probable prefoldin subunit 1, [RH, Score=52.0, Expect=1e-09]} {RNA1509_10249, RNA1509_12241, RNA1509_46766} {RNA1310_46841, RNA1509_10249, RNA1509_12241, RNA1509_46766} {RNA1509_10249, RNA1509_12241, RNA1509_46766, RNA815_26502} Mlig455_037302 {REF} {Length: 769} {Pfam: Prefoldin subunit [PF01920.22, score=62.9]} {Human: ENSG00000113068, PFDN1, prefoldin subunit 1, [RH, Score=92.0, Expect=1e-24]} {Mouse: ENSMUSG00000024346, Pfdn1, prefoldin 1, [RH, Score=91.3, Expect=2e-24]} {Dmel: FBgn0031776, Pfdn1, Prefoldin 1, [RH, Score=70.5, Expect=1e-16]} {Celegans: WBGene00007443, pfd-1, Probable prefoldin subunit 1, [RH, Score=52.0, Expect=1e-09]} {RNA1509_10249, RNA1509_55465} {RNA1310_46841, RNA1509_55465} {RNA1509_55465, RNA815_26502} |
| 10. | MligTC455_30214 | 590 | 12.28 | Mlig455_006816 | Neo: - Age: - |
PIF1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_006816 {REF} {Length: 9659} {Pfam: PIF1-like helicase [PF05970.16, score=336.9]; AAA domain [PF13604.8, score=49.7]; AAA domain [PF13245.8, score=21.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=90.1, Expect=1e-18]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=85.9, Expect=2e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=92.8, Expect=1e-19]} {Celegans: WBGene00019136, F59H6.5, [Score=217, Expect=1e-61]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=85.9, Expect=9e-18]} {RNA1509_7353} {RNA1310_1123.1} {RNA815_252.1} |
| 11. | MligTC455_53086 | 1893 | 39.44 | Mlig455_048828 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.328/0.00381 |
DPH1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_048828 {REF} {Length: 1519} {TRANSSPLICED} {Pfam: Putative diphthamide synthesis protein [PF01866.19, score=378.0]} {Human: ENSG00000108963, DPH1, diphthamide biosynthesis 1, [RH, Score=437, Expect=4e-151]} {Mouse: ENSMUSG00000078789, Dph1, diphthamide biosynthesis 1, [RH, Score=431, Expect=7e-149]} {Dmel: FBgn0036194, CG11652, [RH, Score=447, Expect=5e-155]} {Celegans: WBGene00007576, dph-1, 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1, [RH, Score=442, Expect=4e-154]} {Smed: dd_Smed_v6_8665_0_1, dd_Smed_v6_8665_0_1, [RH, Score=390, Expect=4e-133]} {RNA1509_19209, RNA1509_6724} {RNA1310_16325, RNA1509_19209, RNA1509_6724} {RNA1509_19209, RNA1509_6724, RNA815_8714} |
Berezikov Lab - 2020-2021 © ERIBA