Data search


search
Exact
Search

Results for MligTC455_37802

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_37802 59 1.22 Mlig455_023156

Neo: -

Age: -

Mlig455_023156 {REF} {Length: 1326} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=21.7]; Ankyrin repeats (many copies) [PF13637.8, score=19.5]} {RNA1509_46784} {RNA1310_1951.2} {RNA815_51293}

Cumulative graph for MligTC455_37802

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.107 1.574 1.00000 1.00000
RegionR2 0.94 1.574 0.40195 0.79590
RegionR3 -0.268 1.574 0.62803 1.00000
RegionR4 1.557 1.574 1.00000 1.00000
RegionR5 1.229 1.574 0.19532 0.48211
RegionR6 -2.846 1.574 1.00000 1.00000
RegionR7 0.987 1.574 0.38251 1.00000
RegionR8 -1.492 1.574 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.118 1.574 0.99998 1.00000
RegenerationR2 -0.407 1.574 0.54486 0.89031
RegenerationR3 1.326 1.574 0.48480 0.85280
RegenerationR4 1.916 1.574 0.12513 0.53813
RegenerationR5 -0.264 1.574 0.71877 0.95891
RegenerationR6 3.217 1.574 0.10617 0.40409
RegenerationBL 2.142 1.574 0.23191 0.58360
RegenerationTP 0.209 1.574 0.83426 1.00000


Genes with expression patterns similar to MligTC455_37802

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_37802 59 1.22 Mlig455_023156

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000 Mlig455_023156 {REF} {Length: 1326} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=21.7]; Ankyrin repeats (many copies) [PF13637.8, score=19.5]} {RNA1509_46784} {RNA1310_1951.2} {RNA815_51293}
2. MligTC455_33686 84 1.75 Mlig455_006610, Mlig455_022375

Neo: -

Age: -

1.801 - - 0.952 - - 0.849

Mlig455_006610 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.1} {RNA815_47584}

Mlig455_022375 {REF} {Length: 2487} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_108649} {RNA815_38663}
3. MligTC455_32956 1141 23.76 Mlig455_051391

Neo: -

Age: -

PNPLA7 1.666 - - - - 0.951 0.715 Mlig455_051391 {REF} {Length: 5298} {TRANSSPLICED} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=139.3]; Patatin-like phospholipase [PF01734.24, score=78.2]} {Human: ENSG00000130653, PNPLA7, patatin like phospholipase domain containing 7, [RH, Score=926, Expect=0.0]; ENSG00000032444, PNPLA6, patatin like phospholipase domain containing 6, [RH, Score=894, Expect=0.0]} {Mouse: ENSMUSG00000036833, Pnpla7, patatin-like phospholipase domain containing 7, [RH, Score=911, Expect=0.0]} {Dmel: FBgn0003656, sws, swiss cheese, [RH, Score=823, Expect=0.0]} {Celegans: WBGene00022718, ZK370.4, Uncharacterized NTE family protein ZK370.4, [RH, Score=591, Expect=0.0]} {Smed: dd_Smed_v6_11184_0_1, dd_Smed_v6_11184_0_1, [RH, Score=827, Expect=0.0]} {RNA1509_28533, RNA1509_4301, RNA1509_9455} {RNA1310_948.1, RNA1509_28533, RNA1509_4301, RNA1509_9455} {RNA1509_28533, RNA1509_4301, RNA1509_9455, RNA815_235.1}
4. MligTC455_32957 1141 23.76 Mlig455_070605

Neo: -

Age: -

PNPLA6 1.666 - - - - 0.951 0.715 Mlig455_070605 {REF} {Length: 2477} {Pfam: Patatin-like phospholipase [PF01734.24, score=81.3]} {Human: ENSG00000032444, PNPLA6, patatin like phospholipase domain containing 6, [Score=425, Expect=6e-135]; ENSG00000130653, PNPLA7, patatin like phospholipase domain containing 7, [Score=404, Expect=4e-127]} {Mouse: ENSMUSG00000004565, Pnpla6, patatin-like phospholipase domain containing 6, [Score=421, Expect=9e-134]; ENSMUSG00000036833, Pnpla7, patatin-like phospholipase domain containing 7, [Score=405, Expect=1e-127]} {Dmel: FBgn0003656, sws, swiss cheese, [Score=393, Expect=8e-123]} {Celegans: WBGene00022718, ZK370.4, Uncharacterized NTE family protein ZK370.4, [Score=338, Expect=2e-103]} {Smed: dd_Smed_v6_11184_0_2, dd_Smed_v6_11184_0_2, [Score=439, Expect=3e-140]} {RNA1509_9455} {RNA1310_948.1} {RNA815_235.1}
5. MligTC455_28126 94 1.95 Mlig455_036970

Neo: -

Age: -

0.974 - - 0.974 - - - Mlig455_036970 {REF} {Length: 3032} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}
6. MligTC455_16250 53 1.1 Mlig455_025568

Neo: -

Age: -

Region-enriched R4: 5.317/0.00598

0.964 - - - - - 0.964 Mlig455_025568 {REF} {Length: 2103} {NoTransDecoderORF} {RNA1509_9817} {RNA1310_52418.1} {RNA815_41133}
7. MligTC455_35199 13 0.27 Mlig455_028162

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_028162 {REF} {Length: 1937} {NoTransDecoderORF} {RNA1509_39174} {RNA1310_101529} {RNA815_61412}
8. MligTC455_37123 492 10.24 Mlig455_015331, Mlig455_068762

Neo: -

Age: Up-Down-Up

TPH1 0.956 - - - - 0.956 -

Mlig455_015331 {REF} {Length: 1923} {Pfam: Biopterin-dependent aromatic amino acid hydroxylase [PF00351.23, score=466.9]} {Human: ENSG00000129167, TPH1, tryptophan hydroxylase 1, [Score=402, Expect=9e-137]; ENSG00000139287, TPH2, tryptophan hydroxylase 2, [Score=389, Expect=7e-131]} {Mouse: ENSMUSG00000040046, Tph1, tryptophan hydroxylase 1, [Score=404, Expect=1e-137]; ENSMUSG00000006764, Tph2, tryptophan hydroxylase 2, [Score=389, Expect=6e-131]} {Dmel: FBgn0035187, Trh, trachealess, [Score=375, Expect=5e-125]} {Celegans: WBGene00006600, tph-1, TryPtophan Hydroxylase; Tryptophan hydroxylase, [Score=352, Expect=2e-117]} {Smed: dd_Smed_v6_8392_0_1, dd_Smed_v6_8392_0_1, [Score=408, Expect=5e-138]} {RNA1310_18054} {RNA815_7494}

Mlig455_068762 {REF} {Length: 1917} {Pfam: Biopterin-dependent aromatic amino acid hydroxylase [PF00351.23, score=467.0]} {Human: ENSG00000129167, TPH1, tryptophan hydroxylase 1, [Score=402, Expect=1e-136]; ENSG00000139287, TPH2, tryptophan hydroxylase 2, [Score=392, Expect=5e-132]} {Mouse: ENSMUSG00000040046, Tph1, tryptophan hydroxylase 1, [Score=404, Expect=1e-137]; ENSMUSG00000006764, Tph2, tryptophan hydroxylase 2, [Score=392, Expect=4e-132]} {Dmel: FBgn0035187, Trh, trachealess, [Score=375, Expect=5e-125]} {Celegans: WBGene00006600, tph-1, TryPtophan Hydroxylase; Tryptophan hydroxylase, [Score=355, Expect=7e-119]} {Smed: dd_Smed_v6_8392_0_2, dd_Smed_v6_8392_0_2, [Score=409, Expect=2e-138]} {RNA1310_18054} {RNA815_7494}
9. MligTC455_42053 93 1.93 Mlig455_027261

Neo: -

Age: Down-Up-Down

0.95 - - - - 0.950 - Mlig455_027261 {REF} {Length: 1018} {NoTransDecoderORF} {RNA1509_32735} {RNA1310_29165.1} {RNA815_31830}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA