Data search
Results for MligTC455_33686
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33686 | 84 | 1.75 | Mlig455_006610, Mlig455_022375 | Neo: - Age: - |
Mlig455_006610 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.1} {RNA815_47584} Mlig455_022375 {REF} {Length: 2487} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_108649} {RNA815_38663} |
Cumulative graph for MligTC455_33686
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.604 | 1.792 | 0.99963 | 1.00000 | |
| RegionR2 | -0.281 | 1.792 | 0.84744 | 1.00000 | |
| RegionR3 | -0.569 | 1.792 | 0.89513 | 1.00000 | |
| RegionR4 | 1.207 | 1.792 | 0.48513 | 0.81259 | |
| RegionR5 | 1.856 | 1.792 | 0.09221 | 0.28894 | |
| RegionR6 | 0.155 | 1.792 | 0.73446 | 1.00000 | |
| RegionR7 | 1.158 | 1.792 | 0.47032 | 1.00000 | |
| RegionR8 | -2.923 | 1.792 | 0.99986 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.901 | 1.792 | 0.82173 | 1.00000 | |
| RegenerationR2 | 1.122 | 1.792 | 0.17026 | 0.60953 | |
| RegenerationR3 | 1.341 | 1.792 | 0.27678 | 0.71029 | |
| RegenerationR4 | 1.823 | 1.792 | 0.12123 | 0.53026 | |
| RegenerationR5 | -1.075 | 1.792 | 0.21352 | 0.64810 | |
| RegenerationR6 | 1.344 | 1.792 | 0.23088 | 0.57748 | |
| RegenerationBL | 2.377 | 1.792 | 0.15619 | 0.47290 | |
| RegenerationTP | 1.766 | 1.792 | 0.44769 | 0.86585 |
Genes with expression patterns similar to MligTC455_33686
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33686 | 84 | 1.75 | Mlig455_006610, Mlig455_022375 | Neo: - Age: - |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_006610 {REF} {Length: 515} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.1} {RNA815_47584} Mlig455_022375 {REF} {Length: 2487} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_108649} {RNA815_38663} |
|
| 2. | MligTC455_33603 | 147 | 3.07 | Mlig455_040543, Mlig455_062092 | Neo: - Age: - |
SNED1 | 1.871 | - | - | - | 0.958 | 0.913 | - | Mlig455_040543 {REF} {Length: 3550} {Pfam: EGF-like domain [PF00008.29, score=43.8]; Delta serrate ligand [PF01414.21, score=41.1]; Calcium-binding EGF domain [PF07645.17, score=35.3]; Human growth factor-like EGF [PF12661.9, score=29.0]; EGF domain [PF12947.9, score=20.4]; EGF-like domain [PF07974.15, score=19.4]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=82.4, Expect=2e-15]; ENSG00000074181, NOTCH3, notch 3, [Score=82.0, Expect=3e-15]; ENSG00000188107, EYS, eyes shut homolog (Drosophila), [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=80.1, Expect=8e-15]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=79.7, Expect=9e-15]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=77.8, Expect=5e-14]} {Dmel: FBgn0000463, Dl, dorsal, [Score=83.2, Expect=5e-16]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=84.3, Expect=2e-16]} {Smed: dd_Smed_v6_6929_0_1, dd_Smed_v6_6929_0_1, [Score=88.2, Expect=3e-18]} {RNA1509_59016} {RNA1310_5151.2} {RNA815_5871} Mlig455_062092 {REF} {Length: 4064} {Pfam: Delta serrate ligand [PF01414.21, score=39.8]; Calcium-binding EGF domain [PF07645.17, score=34.9]; EGF-like domain [PF00008.29, score=34.7]; Human growth factor-like EGF [PF12661.9, score=27.4]; EGF domain [PF12947.9, score=20.1]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=82.8, Expect=1e-15]; ENSG00000188107, EYS, eyes shut homolog (Drosophila), [Score=82.4, Expect=4e-15]; ENSG00000074181, NOTCH3, notch 3, [Score=82.0, Expect=5e-15]} {Mouse: ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=85.5, Expect=3e-16]} {Dmel: FBgn0000463, Dl, dorsal, [Score=77.8, Expect=4e-14]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=85.5, Expect=1e-16]} {Smed: dd_Smed_v6_6929_0_1, dd_Smed_v6_6929_0_1, [Score=93.6, Expect=8e-20]} {RNA1509_59016} {RNA1310_17570} {RNA815_5871} |
| 3. | MligTC455_37802 | 59 | 1.22 | Mlig455_023156 | Neo: - Age: - |
1.801 | - | - | 0.952 | - | - | 0.849 | Mlig455_023156 {REF} {Length: 1326} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=21.7]; Ankyrin repeats (many copies) [PF13637.8, score=19.5]} {RNA1509_46784} {RNA1310_1951.2} {RNA815_51293} | |
| 4. | MligTC455_27784 | 357 | 7.44 | Mlig455_058367 | Neo: - Age: Down-Up-Down |
PAK3 | 1.773 | - | - | - | 0.950 | 0.823 | - | Mlig455_058367 {REF} {Length: 3790} {Pfam: Protein kinase domain [PF00069.27, score=237.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=162.0]; P21-Rho-binding domain [PF00786.30, score=34.0]; ABC1 atypical kinase-like domain [PF03109.18, score=25.7]; Kinase-like [PF14531.8, score=23.8]; Fungal protein kinase [PF17667.3, score=22.8]; Phosphotransferase enzyme family [PF01636.25, score=20.3]} {Human: ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=349, Expect=9e-113]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=334, Expect=3e-107]; ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=332, Expect=3e-106]} {Mouse: ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=333, Expect=3e-107]; ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=332, Expect=2e-106]; ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=332, Expect=2e-106]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=331, Expect=8e-103]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=321, Expect=9e-104]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [RH, Score=368, Expect=8e-122]} {RNA1509_4715} {RNA1310_5360.1} {RNA815_4593} |
| 5. | MligTC455_44260 | 140 | 2.91 | Mlig455_023873 | Neo: - Age: Down-Down-Up |
HSF1 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_023873 {REF} {Length: 3292} {TRANSSPLICED} {Pfam: HSF-type DNA-binding [PF00447.19, score=100.6]} {Human: ENSG00000284774, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000185122, HSF1, heat shock transcription factor 1, [Score=136, Expect=2e-34]; ENSG00000025156, HSF2, heat shock transcription factor 2, [Score=133, Expect=4e-33]} {Mouse: ENSMUSG00000022556, Hsf1, heat shock factor 1, [Score=135, Expect=2e-34]; ENSMUSG00000019878, Hsf2, heat shock factor 2, [Score=132, Expect=7e-33]} {Dmel: FBgn0001222, Hsf, Heat shock factor, [RH, Score=127, Expect=5e-31]} {Celegans: WBGene00002004, hsf-1, Heat Shock Factor; Heat shock transcription factor 1, [Score=127, Expect=4e-31]} {Smed: dd_Smed_v6_7535_0_1, dd_Smed_v6_7535_0_1, [RH, Score=108, Expect=4e-25]} {RNA1509_17562} {RNA1310_15982.2} {RNA815_22439} |
| 6. | MligTC455_30067 | 152 | 3.17 | Mlig455_008162 | Neo: - Age: - |
0.968 | - | - | - | 0.968 | - | - | Mlig455_008162 {REF} {Length: 4500} {TRANSSPLICED} {RNA1509_32679} {RNA1310_14141.1} {RNA815_4925.2} | |
| 7. | MligTC455_25565 | 75 | 1.55 | Mlig455_042269 | Neo: - Age: - Region-enriched R4: 4.725/0.00153 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_042269 {REF} {Length: 1344} {RNA1509_48973} {RNA1310_22428.1} {RNA815_17155.1} | |
| 8. | MligTC455_49606 | 678 | 14.12 | Mlig455_029318 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.068 Region-enriched R4: 2.452/0.00000 Regeneration-downregulated R4: -1.768 Regeneration-depleted R4: -1.768 |
PTPN1 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_029318 {REF} {Length: 2843} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=114.6]} {Human: ENSG00000196396, PTPN1, protein tyrosine phosphatase, non-receptor type 1, [Score=163, Expect=1e-45]} {Mouse: ENSMUSG00000027540, Ptpn1, protein tyrosine phosphatase, non-receptor type 1, [Score=166, Expect=1e-46]} {Dmel: FBgn0267487, Ptp61F, Protein tyrosine phosphatase 61F, [Score=159, Expect=9e-44]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=115, Expect=2e-28]} {Smed: dd_Smed_v6_5710_0_1, dd_Smed_v6_5710_0_1, [Score=133, Expect=1e-34]} {RNA1509_26526, RNA1509_27049} {RNA1310_5562, RNA1509_26526, RNA1509_27049} {RNA1509_26526, RNA1509_27049, RNA815_1820} |
| 9. | MligTC455_46230 | 184 | 3.84 | Mlig455_024952 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_024952 {REF} {Length: 197} {NoTransDecoderORF} {RNA1509_36692} {RNA1310_25595.1} {RNA815_9274.2} | |
| 10. | MligTC455_19743 | 540 | 11.25 | Mlig455_048824 | Neo: - Age: Up-Down-Down |
FMNL3 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_048824 {REF} {Length: 4388} {TRANSSPLICED} {Pfam: Formin Homology 2 Domain [PF02181.25, score=255.2]; Diaphanous GTPase-binding Domain [PF06371.15, score=78.4]; Diaphanous FH3 Domain [PF06367.18, score=47.5]} {Human: ENSG00000161791, FMNL3, formin like 3, [Score=274, Expect=5e-77]; ENSG00000184922, FMNL1, formin like 1, [Score=269, Expect=6e-78]} {Mouse: ENSMUSG00000036053, Fmnl2, formin-like 2, [RH, Score=386, Expect=3e-117]} {Dmel: FBgn0267795, Frl, Formin-like, [RH, Score=307, Expect=7e-88]} {Celegans: WBGene00021698, frl-1, FRL (Formin Related gene in Leukocytes) homolog, [Score=173, Expect=8e-44]} {Smed: dd_Smed_v6_3928_0_2, dd_Smed_v6_3928_0_2, [RH, Score=456, Expect=6e-144]} {RNA1509_13312, RNA1509_23073, RNA1509_50834, RNA1509_55866} {RNA1310_6955.1, RNA1509_13312, RNA1509_23073, RNA1509_50834, RNA1509_55866} {RNA1509_13312, RNA1509_23073, RNA1509_50834, RNA1509_55866, RNA815_1314} |
| 11. | MligTC455_48725 | 712 | 14.84 | Mlig455_040273 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.633/0.01961 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_040273 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_31884} {RNA1310_19097} {RNA815_6565} | |
| 12. | MligTC455_53491 | 363 | 7.57 | Mlig455_033213 | Neo: - Age: - |
CTNNB1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_033213 {REF} {Length: 3831} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=72.2]; Adaptin N terminal region [PF01602.22, score=22.2]; Domain of unknown function (DUF3361) [PF11841.10, score=19.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=18.8]} {Human: ENSG00000168036, CTNNB1, catenin beta 1, [Score=345, Expect=2e-109]; ENSG00000173801, JUP, junction plakoglobin, [Score=340, Expect=5e-107]} {Mouse: ENSMUSG00000006932, Ctnnb1, catenin (cadherin associated protein), beta 1, [Score=344, Expect=2e-110]; ENSMUSG00000001552, Jup, junction plakoglobin, [Score=337, Expect=4e-106]} {Dmel: FBgn0000117, arm, armadillo, [Score=353, Expect=1e-112]} {Celegans: WBGene00001979, hmp-2, Beta-catenin-like protein hmp-2, [Score=187, Expect=3e-51]} {Smed: dd_Smed_v6_2688_0_1, dd_Smed_v6_2688_0_1, [Score=318, Expect=2e-97]} {RNA1509_3591} {RNA1310_2400.1} {RNA815_2793} |
| 13. | MligTC455_37521 | 39 | 0.81 | Mlig455_019645 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_019645 {REF} {Length: 636} {NoTransDecoderORF} {RNA1310_73845} | |
| 14. | MligTC455_13735 | 77 | 1.59 | Mlig455_001782 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_001782 {REF} {Length: 598} {NoTransDecoderORF} | |
| 15. | MligTC455_48760 | 15 | 0.31 | Mlig455_009006 | Neo: - Age: - |
SULT1A1 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_009006 {REF} {Length: 1306} {Pfam: Sulfotransferase domain [PF00685.29, score=204.1]; Sulfotransferase family [PF13469.8, score=33.6]} {Human: ENSG00000196502, SULT1A1, sulfotransferase family 1A member 1, [RH, Score=162, Expect=4e-47]} {Mouse: ENSMUSG00000029269, Sult1b1, sulfotransferase family 1B, member 1, [RH, Score=167, Expect=8e-49]} {Dmel: FBgn0037665, St2, Sulfotransferase 2, [Score=131, Expect=4e-35]} {Celegans: WBGene00013748, ssu-1, Suppressor of Stomatin mutant Uncoordination, [Score=108, Expect=2e-26]} {Smed: dd_Smed_v6_34919_0_1, dd_Smed_v6_34919_0_1, [RH, Score=276, Expect=2e-91]} {RNA1310_95833} |
| 16. | MligTC455_35396 | 343 | 7.14 | Mlig455_026663 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_026663 {REF} {Length: 2322} {NoTransDecoderORF} {RNA1509_39127} {RNA1310_39063} {RNA815_8730.1} | |
| 17. | MligTC455_45550 | 3592 | 74.83 | Mlig455_034559, Mlig455_066277 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.335 Region-specific R6: 1.630 Region-enriched R6: 1.490/0.00000 Regeneration-upregulated BL: 1.510 Regeneration-enriched BL: 1.510 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_034559 {REF} {Length: 6340} {Pfam: Innexin [PF00876.20, score=208.8]} {Celegans: WBGene00002140, inx-18, Innexin, [Score=136, Expect=3e-35]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [Score=241, Expect=1e-74]} {RNA1509_32599} {RNA1310_1123.1} {RNA815_252.1} Mlig455_066277 {REF} {Length: 3367} {Pfam: Innexin [PF00876.20, score=141.8]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=104, Expect=3e-25]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [Score=163, Expect=4e-46]} {RNA1509_54647} {RNA1310_24139.2} {RNA815_12256.1} |
Berezikov Lab - 2020-2021 © ERIBA