Data search
Results for MligTC455_37939
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37939 | 647 | 13.48 | Mlig455_058807, Mlig455_058859 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.206/0.04923 |
MGMT | Mlig455_058807 {REF} {Length: 1022} {TRANSSPLICED} {Pfam: 6-O-methylguanine DNA methyltransferase, DNA binding domain [PF01035.22, score=95.8]} {Human: ENSG00000170430, MGMT, O-6-methylguanine-DNA methyltransferase, [RH, Score=111, Expect=1e-29]} {Mouse: ENSMUSG00000054612, Mgmt, O-6-methylguanine-DNA methyltransferase, [RH, Score=110, Expect=1e-29]} {Celegans: WBGene00000093, agt-1, AlkylGuanine DNA alkylTransferase, [RH, Score=47.0, Expect=1e-06]} {RNA1509_40722} {RNA1310_29880} {RNA815_43356} Mlig455_058859 {REF} {Length: 1325} {TRANSSPLICED} {RNA1509_40722} {RNA1310_29880, RNA1509_40722} {RNA1509_40722, RNA815_43356} |
Cumulative graph for MligTC455_37939
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.45 | 4.076 | 0.71450 | 1.00000 | |
| RegionR2 | -0.636 | 4.076 | 0.32709 | 0.71915 | |
| RegionR3 | 0.149 | 4.076 | 0.77899 | 1.00000 | |
| RegionR4 | 1.362 | 4.076 | 0.01379 | 0.07759 | |
| RegionR5 | 1.206 | 4.076 | 0.00803 | 0.04923 | |
| RegionR6 | -0.345 | 4.076 | 0.52861 | 1.00000 | |
| RegionR7 | -0.225 | 4.076 | 0.72652 | 1.00000 | |
| RegionR8 | -1.061 | 4.076 | 0.22017 | 0.82817 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.246 | 4.076 | 0.88291 | 1.00000 | |
| RegenerationR2 | 0.081 | 4.076 | 0.88882 | 1.00000 | |
| RegenerationR3 | -0.046 | 4.076 | 0.93918 | 1.00000 | |
| RegenerationR4 | -0.435 | 4.076 | 0.47083 | 0.85385 | |
| RegenerationR5 | -0.585 | 4.076 | 0.29508 | 0.72261 | |
| RegenerationR6 | 0.697 | 4.076 | 0.25592 | 0.60623 | |
| RegenerationBL | 0.843 | 4.076 | 0.19112 | 0.52530 | |
| RegenerationTP | 0.684 | 4.076 | 0.35840 | 0.79899 |
Genes with expression patterns similar to MligTC455_37939
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37939 | 647 | 13.48 | Mlig455_058807, Mlig455_058859 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.206/0.04923 |
MGMT | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058807 {REF} {Length: 1022} {TRANSSPLICED} {Pfam: 6-O-methylguanine DNA methyltransferase, DNA binding domain [PF01035.22, score=95.8]} {Human: ENSG00000170430, MGMT, O-6-methylguanine-DNA methyltransferase, [RH, Score=111, Expect=1e-29]} {Mouse: ENSMUSG00000054612, Mgmt, O-6-methylguanine-DNA methyltransferase, [RH, Score=110, Expect=1e-29]} {Celegans: WBGene00000093, agt-1, AlkylGuanine DNA alkylTransferase, [RH, Score=47.0, Expect=1e-06]} {RNA1509_40722} {RNA1310_29880} {RNA815_43356} Mlig455_058859 {REF} {Length: 1325} {TRANSSPLICED} {RNA1509_40722} {RNA1310_29880, RNA1509_40722} {RNA1509_40722, RNA815_43356} |
| 2. | MligTC455_37938 | 645 | 13.44 | Mlig455_017590 | Neo: Irradiation Age: - Region-enriched R5: 1.267/0.04562 |
MGMT | 5.949 | 0.990 | 0.999 | 0.997 | 0.997 | 0.972 | 0.994 | Mlig455_017590 {REF} {Length: 1430} {TRANSSPLICED} {Pfam: 6-O-methylguanine DNA methyltransferase, DNA binding domain [PF01035.22, score=41.6]} {Human: ENSG00000170430, MGMT, O-6-methylguanine-DNA methyltransferase, [Score=51.2, Expect=1e-07]} {Mouse: ENSMUSG00000054612, Mgmt, O-6-methylguanine-DNA methyltransferase, [Score=57.4, Expect=3e-10]} {RNA1509_18188} {RNA1310_27556, RNA1509_18188} {RNA1509_18188, RNA815_43356} |
| 3. | MligTC455_24341 | 11325 | 235.93 | Mlig455_060037 | Neo: Int S/G2/M Age: logFC(26M/2M)=1.329 |
RPS8 | 1.846 | - | - | 0.896 | - | 0.950 | - | Mlig455_060037 {REF} {Length: 873} {TRANSSPLICED} {Pfam: Ribosomal protein S8e [PF01201.24, score=170.3]} {Human: ENSG00000142937, RPS8, ribosomal protein S8, [RH, Score=256, Expect=1e-86]} {Mouse: ENSMUSG00000047675, Rps8, ribosomal protein S8, [RH, Score=256, Expect=8e-87]} {Dmel: FBgn0039713, RpS8, Ribosomal protein S8, [RH, Score=268, Expect=2e-91]} {Celegans: WBGene00004477, rps-8, 40S ribosomal protein S8, [RH, Score=247, Expect=1e-83]} {Smed: dd_Smed_v6_156_0_1, dd_Smed_v6_156_0_1, [RH, Score=235, Expect=7e-79]} {RNA1509_13382} {RNA1310_40542} {RNA815_18150} |
| 4. | MligTC455_10796 | 711 | 14.82 | Mlig455_044153 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.235/0.00582 |
VPS72 | 1.723 | - | - | 0.769 | 0.954 | - | - | Mlig455_044153 {REF} {Length: 1698} {TRANSSPLICED} {Pfam: YL1 nuclear protein [PF05764.15, score=116.5]; YL1 nuclear protein C-terminal domain [PF08265.13, score=39.3]} {Human: ENSG00000163159, VPS72, vacuolar protein sorting 72 homolog, [RH, Score=140, Expect=1e-36]} {Mouse: ENSMUSG00000008958, Vps72, vacuolar protein sorting 72, [RH, Score=134, Expect=8e-35]} {Dmel: FBgn0032321, YL-1, [RH, Score=102, Expect=1e-23]} {Smed: dd_Smed_v6_6198_0_1, dd_Smed_v6_6198_0_1, [RH, Score=171, Expect=5e-49]} {RNA1509_3049, RNA1509_56403, RNA1509_56647, RNA1509_59481} {RNA1310_18768, RNA1509_3049, RNA1509_56403, RNA1509_56647, RNA1509_59481} {RNA1509_3049, RNA1509_56403, RNA1509_56647, RNA1509_59481, RNA815_24353} |
| 5. | MligTC455_44901 | 6543 | 136.31 | Mlig455_023467 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.013/0.00001 |
EIF3H | 1.708 | 0.753 | - | - | - | 0.955 | - | Mlig455_023467 {REF} {Length: 1495} {TRANSSPLICED} {Pfam: C-terminal region of eIF3h [PF19445.1, score=130.6]; JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=58.1]} {Human: ENSG00000147677, EIF3H, eukaryotic translation initiation factor 3 subunit H, [RH, Score=234, Expect=1e-73]} {Mouse: ENSMUSG00000022312, Eif3h, eukaryotic translation initiation factor 3, subunit H, [RH, Score=233, Expect=5e-73]} {Dmel: FBgn0022023, eIF3h, eukaryotic translation initiation factor 3 subunit h, [RH, Score=193, Expect=3e-58]} {Celegans: WBGene00001231, eif-3.H, Eukaryotic translation initiation factor 3 subunit H, [RH, Score=154, Expect=3e-43]} {Smed: dd_Smed_v6_1220_0_1, dd_Smed_v6_1220_0_1, [RH, Score=164, Expect=3e-47]} {RNA1509_1028} {RNA1310_20679} {RNA815_8818} |
| 6. | MligTC455_20913 | 14492 | 301.92 | Mlig455_002399, Mlig455_054651 | Neo: - |
RPS12 | 1.674 | - | - | 0.709 | - | 0.965 | - | Mlig455_002399 {REF} {Length: 786} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=120, Expect=5e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_1190} {RNA1310_46273, RNA1509_1190} {RNA1509_1190, RNA815_22452.1} Mlig455_054651 {REF} {Length: 758} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]; ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=121, Expect=3e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_44047, RNA1509_4432} {RNA1310_49080, RNA1509_44047, RNA1509_4432} {RNA1509_44047, RNA1509_4432, RNA815_22452.2} |
| 7. | MligTC455_22462 | 198 | 4.12 | Mlig455_066858 | Neo: - Age: - |
0.969 | - | - | - | 0.969 | - | - | Mlig455_066858 {REF} {Length: 1973} {RNA1509_45595} {RNA1310_70696} {RNA815_7856.3} | |
| 8. | MligTC455_21069 | 933 | 19.44 | Mlig455_002844 | Neo: - Age: Down-Up-Up |
LSG1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_002844 {REF} {Length: 2622} {Pfam: 50S ribosome-binding GTPase [PF01926.25, score=47.3]; RsgA GTPase [PF03193.18, score=23.2]} {Human: ENSG00000041802, LSG1, large 60S subunit nuclear export GTPase 1, [RH, Score=207, Expect=2e-58]} {Mouse: ENSMUSG00000022538, Lsg1, large 60S subunit nuclear export GTPase 1, [RH, Score=210, Expect=1e-59]} {Dmel: FBgn0266284, Ns3, Nucleostemin 3, [Score=335, Expect=2e-107]} {Celegans: WBGene00016907, C53H9.2, [RH, Score=302, Expect=2e-95]} {Smed: dd_Smed_v6_7698_0_1, dd_Smed_v6_7698_0_1, [RH, Score=184, Expect=2e-50]} {RNA1509_11368, RNA1509_13533} {RNA1310_10776.1, RNA1509_11368, RNA1509_13533} {RNA1509_11368, RNA1509_13533, RNA815_4120} |
| 9. | MligTC455_25452 | 649 | 13.52 | Mlig455_021520 | Neo: - Age: logFC(26M/2M)=0.444 Region-enriched R5: 1.068/0.03144 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_021520 {REF} {Length: 2250} {TRANSSPLICED} {RNA1509_20029, RNA1509_46521} {RNA1310_11367, RNA1509_20029, RNA1509_46521} {RNA1509_20029, RNA1509_46521, RNA815_3706} | |
| 10. | MligTC455_44029 | 11226 | 233.88 | Mlig455_027227, Mlig455_027442 | Neo: - Age: logFC(26M/2M)=2.696 |
PLA2R1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_027227 {REF} {Length: 1824} {Pfam: Lectin C-type domain [PF00059.23, score=60.4]} {Human: ENSG00000153246, PLA2R1, phospholipase A2 receptor 1, [Score=54.3, Expect=2e-07]} {RNA1509_11434, RNA1509_39886, RNA1509_4910} {RNA1310_18562.1, RNA1509_11434, RNA1509_39886, RNA1509_4910} {RNA1509_11434, RNA1509_39886, RNA1509_4910, RNA815_1541.1} Mlig455_027442 {REF} {Length: 1944} {Pfam: Lectin C-type domain [PF00059.23, score=59.9]} {Human: ENSG00000153246, PLA2R1, phospholipase A2 receptor 1, [Score=56.2, Expect=4e-08]} {RNA1509_22261, RNA1509_51803, RNA1509_877} {RNA1310_18562.1, RNA1509_22261, RNA1509_51803, RNA1509_877} {RNA1509_22261, RNA1509_51803, RNA1509_877, RNA815_1541.1} |
| 11. | MligTC455_50736 | 5253 | 109.44 | Mlig455_030264 | Neo: - Age: - Region-enriched R6: 1.447/0.04006 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_030264 {REF} {Length: 442} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_524} {RNA1310_31841} {RNA815_1325} |