M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_20913

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20913 14492 301.92 Mlig455_002399, Mlig455_054651

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.203

 RPS12

Mlig455_002399 {REF} {Length: 786} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=120, Expect=5e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_1190} {RNA1310_46273, RNA1509_1190} {RNA1509_1190, RNA815_22452.1}

Mlig455_054651 {REF} {Length: 758} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]; ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=121, Expect=3e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_44047, RNA1509_4432} {RNA1310_49080, RNA1509_44047, RNA1509_4432} {RNA1509_44047, RNA1509_4432, RNA815_22452.2}

Cumulative graph for MligTC455_20913

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.538 8.352 0.16257 0.78495
RegionR2 -0.584 8.352 0.03140 0.20086
RegionR3 0.492 8.352 0.02574 0.27394
RegionR4 0.872 8.352 0.00042 0.00522
RegionR5 0.56 8.352 0.00932 0.05487
RegionR6 0.21 8.352 0.35272 0.93730
RegionR7 -0.107 8.352 0.64649 1.00000
RegionR8 -0.905 8.352 0.00123 0.05445

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.689 8.352 0.17557 0.91751
RegenerationR2 0.14 8.352 0.62032 0.92329
RegenerationR3 -0.25 8.352 0.39247 0.79752
RegenerationR4 -0.223 8.352 0.45309 0.84375
RegenerationR5 -0.135 8.352 0.63806 0.92593
RegenerationR6 0.05 8.352 0.86319 1.00000
RegenerationBL 0.578 8.352 0.02173 0.16031
RegenerationTP 0.141 8.352 0.62160 0.97332


Genes with expression patterns similar to MligTC455_20913

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20913 14492 301.92 Mlig455_002399, Mlig455_054651

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.203

 RPS12 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_002399 {REF} {Length: 786} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=120, Expect=5e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_1190} {RNA1310_46273, RNA1509_1190} {RNA1509_1190, RNA815_22452.1}

Mlig455_054651 {REF} {Length: 758} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]; ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=121, Expect=3e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_44047, RNA1509_4432} {RNA1310_49080, RNA1509_44047, RNA1509_4432} {RNA1509_44047, RNA1509_4432, RNA815_22452.2}
2. MligTC455_20914 7692 160.24 Mlig455_057639

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.319

Region-enriched R4: 1.016/0.00013

 RPS12 5.449 0.980 0.992 0.934 0.722 0.936 0.885 Mlig455_057639 {REF} {Length: 783} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=120, Expect=5e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_1190, RNA1509_4500} {RNA1310_46273, RNA1509_4500} {RNA1509_4500, RNA815_22452.1}
3. MligTC455_22155 1704 35.5 Mlig455_016037

Neo: -

Age: logFC(26M/2M)=0.344

Region-enriched R4: 1.404/0.01031
Region-enriched R5: 1.154/0.00691

 IFRD1 1.829 - - - 0.877 0.952 - Mlig455_016037 {REF} {Length: 1941} {TRANSSPLICED} {Pfam: Interferon-related developmental regulator (IFRD) [PF05004.15, score=187.5]; Interferon-related protein conserved region [PF04836.14, score=33.3]} {Human: ENSG00000006652, IFRD1, interferon related developmental regulator 1, [RH, Score=159, Expect=2e-43]} {Mouse: ENSMUSG00000001627, Ifrd1, interferon-related developmental regulator 1, [RH, Score=162, Expect=1e-44]} {Dmel: FBgn0051694, CG31694, [RH, Score=172, Expect=2e-48]} {Celegans: WBGene00010232, F58B3.6, [RH, Score=72.4, Expect=1e-13]} {Smed: dd_Smed_v6_5819_0_1, dd_Smed_v6_5819_0_1, [RH, Score=181, Expect=6e-52]} {RNA1509_2396, RNA1509_5679} {RNA1310_14644, RNA1509_2396, RNA1509_5679} {RNA1509_2396, RNA1509_5679, RNA815_5470}
4. MligTC455_18959 774 16.12 Mlig455_042418

Neo: Int S/G2/M

Age: -

 GEMIN2 1.777 - - - 0.825 - 0.952 Mlig455_042418 {REF} {Length: 1155} {TRANSSPLICED} {Pfam: Survival motor neuron (SMN) interacting protein 1 (SIP1) [PF04938.14, score=147.1]} {Human: ENSG00000092208, GEMIN2, gem nuclear organelle associated protein 2, [RH, Score=92.0, Expect=7e-21]} {Mouse: ENSMUSG00000060121, Gemin2, gem nuclear organelle associated protein 2, [RH, Score=105, Expect=4e-26]} {Celegans: WBGene00004886, smi-1, SMN (Survival of motor neuron) protein Interactor, [Score=62.0, Expect=6e-11]} {Smed: dd_Smed_v6_11175_0_4, dd_Smed_v6_11175_0_4, [Score=51.2, Expect=2e-07]} {RNA1509_43080} {RNA1310_28644} {RNA815_45784}
5. MligTC455_36709 3794 79.04 Mlig455_059511

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.064/0.00002

 TXN2 1.754 - - - 0.960 0.794 - Mlig455_059511 {REF} {Length: 986} {TRANSSPLICED} {Pfam: Thioredoxin [PF00085.22, score=66.7]} {Human: ENSG00000100348, TXN2, thioredoxin 2, [RH, Score=102, Expect=4e-27]} {Mouse: ENSMUSG00000005354, Txn2, thioredoxin 2, [RH, Score=100, Expect=4e-27]} {Dmel: FBgn0035334, CG8993, [RH, Score=81.3, Expect=2e-19]} {Celegans: WBGene00007099, trx-2, Probable thioredoxin-2, [Score=79.7, Expect=4e-19]} {Smed: dd_Smed_v6_872_0_1, dd_Smed_v6_872_0_1, [RH, Score=89.7, Expect=3e-23]} {RNA1509_7447, RNA1509_8127} {RNA1310_36313.1, RNA1509_7447} {RNA1509_7447, RNA815_10101.2}
6. MligTC455_35110 687 14.31 Mlig455_046842, Mlig455_046848

Neo: Neoblast

Age: -

 SMYD2 1.741 - - - - 0.964 0.777

Mlig455_046842 {REF} {Length: 2020} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=41.2]} {Human: ENSG00000143499, SMYD2, SET and MYND domain containing 2, [Score=50.8, Expect=8e-07]; ENSG00000004838, ZMYND10, zinc finger MYND-type containing 10, [Score=48.9, Expect=4e-06]} {Mouse: ENSMUSG00000026603, Smyd2, SET and MYND domain containing 2, [Score=47.8, Expect=6e-06]} {Dmel: FBgn0036624, RAF2, RING-associated factor 2, [Score=46.6, Expect=1e-05]} {Celegans: WBGene00044070, set-18, SET (Trithorax/polycomb) domain containing, [Score=46.2, Expect=1e-05]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=50.1, Expect=5e-07]} {RNA1509_13959} {RNA1310_19936.1, RNA1509_13959} {RNA1509_13959, RNA815_19051}

Mlig455_046848 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=41.4]} {Human: ENSG00000143499, SMYD2, SET and MYND domain containing 2, [Score=50.8, Expect=8e-07]; ENSG00000004838, ZMYND10, zinc finger MYND-type containing 10, [Score=48.5, Expect=5e-06]} {Mouse: ENSMUSG00000026603, Smyd2, SET and MYND domain containing 2, [Score=47.8, Expect=5e-06]} {Celegans: WBGene00044070, set-18, SET (Trithorax/polycomb) domain containing, [Score=46.2, Expect=1e-05]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=49.7, Expect=5e-07]} {RNA1509_13959} {RNA1310_19936.1} {RNA815_19051}
7. MligTC455_28632 262 5.45 Mlig455_037080

Neo: -

Age: Down-Down-Up

 NR1I2 1.704 - - - - 0.964 0.740 Mlig455_037080 {REF} {Length: 3896} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=60.5]; Domain of unknown function (DUF4516) [PF14990.8, score=21.6]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=80.1, Expect=2e-15]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=79.7, Expect=1e-15]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=80.5, Expect=4e-16]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=79.3, Expect=2e-15]} {Dmel: FBgn0261239, Hr39, Hormone receptor-like in 39, [Score=82.8, Expect=3e-16]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [Score=88.2, Expect=3e-18]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [RH, Score=90.9, Expect=3e-19]} {RNA1509_27608} {RNA1310_7620} {RNA815_14710}
8. MligTC455_46974 1727 35.98 Mlig455_056646

Neo: -

Age: Down-Up-Up

 CNOT3 1.702 - - - - 0.736 0.966 Mlig455_056646 {REF} {Length: 2948} {Pfam: Not1 N-terminal domain, CCR4-Not complex component [PF04065.17, score=262.1]; NOT2 / NOT3 / NOT5 family [PF04153.20, score=119.6]} {Human: ENSG00000273943, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000274176, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000277114, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000274616, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000274941, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000277600, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000275979, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000277615, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000088038, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000276082, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]} {Mouse: ENSMUSG00000035632, Cnot3, CCR4-NOT transcription complex, subunit 3, [RH, Score=211, Expect=1e-61]} {Dmel: FBgn0033029, Not3, CCR4-NOT transcription complex subunit 3, [RH, Score=265, Expect=1e-76]} {Celegans: WBGene00003826, ntl-3, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=185, Expect=2e-49]} {Smed: dd_Smed_v6_5044_0_1, dd_Smed_v6_5044_0_1, [RH, Score=229, Expect=8e-65]} {RNA1509_12886, RNA1509_21644} {RNA1310_4741.1, RNA1509_21644} {RNA1509_21644, RNA815_11164}
9. MligTC455_37939 647 13.48 Mlig455_058807, Mlig455_058859

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.206/0.04923

 MGMT 1.674 - - 0.709 - 0.965 -

Mlig455_058807 {REF} {Length: 1022} {TRANSSPLICED} {Pfam: 6-O-methylguanine DNA methyltransferase, DNA binding domain [PF01035.22, score=95.8]} {Human: ENSG00000170430, MGMT, O-6-methylguanine-DNA methyltransferase, [RH, Score=111, Expect=1e-29]} {Mouse: ENSMUSG00000054612, Mgmt, O-6-methylguanine-DNA methyltransferase, [RH, Score=110, Expect=1e-29]} {Celegans: WBGene00000093, agt-1, AlkylGuanine DNA alkylTransferase, [RH, Score=47.0, Expect=1e-06]} {RNA1509_40722} {RNA1310_29880} {RNA815_43356}

Mlig455_058859 {REF} {Length: 1325} {TRANSSPLICED} {RNA1509_40722} {RNA1310_29880, RNA1509_40722} {RNA1509_40722, RNA815_43356}
10. MligTC455_48108 469 9.76 Mlig455_005110

Neo: -

Age: Down-Up-Up

 SLC47A2 1.672 - - - 0.721 0.951 - Mlig455_005110 {REF} {Length: 2550} {Pfam: MatE [PF01554.20, score=163.9]; Polysaccharide biosynthesis C-terminal domain [PF14667.8, score=29.8]} {Human: ENSG00000180638, SLC47A2, solute carrier family 47 member 2, [Score=294, Expect=7e-91]; ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=280, Expect=1e-85]} {Mouse: ENSMUSG00000010122, Slc47a1, solute carrier family 47, member 1, [Score=291, Expect=5e-90]; ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [Score=280, Expect=8e-86]} {Smed: dd_Smed_v6_11376_0_1, dd_Smed_v6_11376_0_1, [RH, Score=433, Expect=3e-145]} {RNA1509_37205} {RNA1310_8224.2, RNA1509_37205} {RNA1509_37205, RNA815_3210}
11. MligTC455_45603 262 5.45 Mlig455_019504

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.784/0.01684

 GRPEL1 1.67 - - - 0.706 0.964 - Mlig455_019504 {REF} {Length: 1282} {TRANSSPLICED} {Pfam: GrpE [PF01025.21, score=155.5]} {Human: ENSG00000109519, GRPEL1, GrpE like 1, mitochondrial, [RH, Score=161, Expect=5e-49]} {Mouse: ENSMUSG00000029198, Grpel1, GrpE-like 1, mitochondrial, [RH, Score=156, Expect=2e-47]} {Dmel: FBgn0014877, Roe1, [RH, Score=162, Expect=5e-50]} {Celegans: WBGene00007927, C34C12.8, GrpE protein homolog, mitochondrial, [RH, Score=137, Expect=7e-40]} {Smed: dd_Smed_v6_1172_0_1, dd_Smed_v6_1172_0_1, [RH, Score=154, Expect=8e-47]} {RNA1509_16786} {RNA1310_25971} {RNA815_10875.1}
12. MligTC455_46485 11343 236.3 Mlig455_058552

Neo: -

Age: logFC(26M/2M)=0.439

Region-enriched R5: 1.281/0.00000

 SSR3 1.651 - - - 0.701 0.950 - Mlig455_058552 {REF} {Length: 873} {TRANSSPLICED} {Pfam: Translocon-associated protein, gamma subunit (TRAP-gamma) [PF07074.14, score=243.7]} {Human: ENSG00000114850, SSR3, signal sequence receptor subunit 3, [RH, Score=219, Expect=3e-73]} {Mouse: ENSMUSG00000027828, Ssr3, signal sequence receptor, gamma, [RH, Score=219, Expect=3e-73]} {Dmel: FBgn0025700, CG5885, [RH, Score=211, Expect=3e-70]} {Celegans: WBGene00021420, trap-3, TRanslocon-Associated Protein, [RH, Score=132, Expect=2e-39]} {Smed: dd_Smed_v6_1265_0_1, dd_Smed_v6_1265_0_1, [RH, Score=198, Expect=2e-65]} {RNA1509_2277} {RNA1310_34158} {RNA815_14658.1}
13. MligTC455_38691 662 13.8 Mlig455_011325

Neo: -

Age: -

 CTR9 0.978 - - - 0.978 - - Mlig455_011325 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=132.0]; Tetratricopeptide repeat [PF07719.19, score=126.5]; Tetratricopeptide repeat [PF13181.8, score=107.0]; Tetratricopeptide repeat [PF14559.8, score=105.8]; Tetratricopeptide repeat [PF13424.8, score=102.2]; Tetratricopeptide repeat [PF13428.8, score=89.3]; Tetratricopeptide repeat [PF13431.8, score=79.1]; Tetratricopeptide repeat [PF13432.8, score=77.7]; TPR repeat [PF13414.8, score=68.0]; Tetratricopeptide repeat [PF13176.8, score=60.8]; Tetratricopeptide repeat [PF13374.8, score=51.0]; Tetratricopeptide repeat [PF13174.8, score=41.5]; Soluble NSF attachment protein, SNAP [PF14938.8, score=40.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=39.3]; Tetratricopeptide repeat [PF13371.8, score=26.1]; Tetratricopeptide repeat [PF07721.16, score=25.8]} {Human: ENSG00000198730, CTR9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=955, Expect=0.0]} {Mouse: ENSMUSG00000005609, Ctr9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=957, Expect=0.0]} {Dmel: FBgn0035205, Ctr9, [RH, Score=893, Expect=0.0]} {Celegans: WBGene00007184, ctr-9, RNA polymerase-associated protein CTR9, [RH, Score=539, Expect=4e-173]} {Smed: dd_Smed_v6_2695_0_1, dd_Smed_v6_2695_0_1, [RH, Score=884, Expect=0.0]} {RNA1509_3063} {RNA1310_2272.1} {RNA815_1958}
14. MligTC455_49444 1545 32.19 Mlig455_041799

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.110/0.00428

 AK6 0.959 - - - 0.959 - - Mlig455_041799 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: AAA domain [PF13238.8, score=92.3]; AAA domain [PF13521.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.8]; AAA domain [PF13401.8, score=26.1]; RNA helicase [PF00910.24, score=25.4]; AAA domain [PF13207.8, score=23.6]; NTPase [PF03266.17, score=21.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.3]; AAA domain [PF13671.8, score=20.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.8]; Parvovirus non-structural protein NS1 [PF01057.19, score=18.0]} {Human: ENSG00000279247, AK6, adenylate kinase 6, [RH, Score=186, Expect=2e-60]; ENSG00000085231, AK6, adenylate kinase 6, [RH, Score=186, Expect=2e-60]} {Mouse: ENSMUSG00000078941, Ak6, adenylate kinase 6, [RH, Score=194, Expect=1e-63]} {Dmel: FBgn0033754, Ak6, Adenylate kinase 6, [RH, Score=168, Expect=1e-53]} {Celegans: WBGene00008458, E02H1.6, Adenylate kinase isoenzyme 6 homolog, [RH, Score=172, Expect=3e-55]} {Smed: dd_Smed_v6_9332_0_1, dd_Smed_v6_9332_0_1, [RH, Score=185, Expect=2e-60]} {RNA1509_20178, RNA1509_3049} {RNA1310_31173.2, RNA1509_20178} {RNA1509_20178, RNA815_14839}
15. MligTC455_20295 4868 101.42 Mlig455_009806, Mlig455_010373

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.319

 PNO1 0.957 - - - 0.957 - -

Mlig455_009806 {REF} {Length: 3596} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=20.2]} {Human: ENSG00000115946, PNO1, partner of NOB1 homolog, [RH, Score=206, Expect=4e-66]} {Mouse: ENSMUSG00000020116, Pno1, partner of NOB1 homolog, [RH, Score=207, Expect=5e-67]} {Dmel: FBgn0027334, l(1)G0004, lethal (1) G0004, [RH, Score=214, Expect=1e-69]} {Celegans: WBGene00013144, Y53C12B.2, RNA-binding protein pno-1, [RH, Score=201, Expect=2e-64]} {Smed: dd_Smed_v6_1077_0_1, dd_Smed_v6_1077_0_1, [RH, Score=131, Expect=3e-38]} {RNA1509_6066, RNA1509_8823} {RNA1310_27467, RNA1509_8823} {RNA1509_8823, RNA815_20932}

Mlig455_010373 {REF} {Length: 3951} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=18.8]} {Human: ENSG00000115946, PNO1, partner of NOB1 homolog, [RH, Score=206, Expect=3e-66]} {Mouse: ENSMUSG00000020116, Pno1, partner of NOB1 homolog, [RH, Score=207, Expect=5e-67]} {Dmel: FBgn0027334, l(1)G0004, lethal (1) G0004, [RH, Score=213, Expect=1e-69]} {Celegans: WBGene00013144, Y53C12B.2, RNA-binding protein pno-1, [RH, Score=201, Expect=2e-64]} {Smed: dd_Smed_v6_1077_0_1, dd_Smed_v6_1077_0_1, [RH, Score=129, Expect=2e-37]} {RNA1509_46964, RNA1509_6066} {RNA1310_27467, RNA1509_46964, RNA1509_6066} {RNA1509_46964, RNA1509_6066, RNA815_20932}
16. MligTC455_39193 2183 45.47 Mlig455_062607

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.251

Region-enriched R5: 1.083/0.00008

 SND1 0.952 - - - - 0.952 - Mlig455_062607 {REF} {Length: 6180} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=182.0]; Tudor domain [PF00567.26, score=37.9]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=698, Expect=0.0]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=696, Expect=0.0]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [RH, Score=607, Expect=0.0]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [RH, Score=698, Expect=0.0]} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1310_6353, RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714, RNA815_2807}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA