Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_37960 | 18230 | 379.78 | Mlig455_067109, Mlig455_067122 | Neo: Int S/G2/M Age: - |
UBC | Mlig455_067109 {REF} {Length: 1584} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=550.0]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=271.1]; Ubiquitin-like domain [PF14560.8, score=102.3]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=73.2]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=67.9]; Ubiquitin-like domain [PF18037.3, score=62.0]; DUF2407 ubiquitin-like domain [PF10302.11, score=55.0]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.8, score=38.1]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=35.8]; FlgD Ig-like domain [PF13860.8, score=32.8]; Cilia- and flagella-associated protein 298 [PF11069.10, score=30.1]; Staphylokinase/Streptokinase family [PF02821.18, score=30.0]; Crinkler effector protein N-terminal domain [PF20147.1, score=29.7]; Ubiquitin-like domain [PF18036.3, score=28.7]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=25.0]; GDYXXLXY protein [PF14345.8, score=24.4]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=22.8]; Protein of unknown function (DUF969) [PF06149.14, score=22.4]; Rubisco accumulation factor 1 helix turn helix domain [PF18579.3, score=21.0]; Bacterial Ig domain [PF17957.3, score=20.2]; ORF11CD3 domain [PF10549.11, score=19.6]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=743, Expect=0.0]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=744, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=744, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=733, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=1e-50]} {RNA1509_199} {RNA1310_58147} {RNA815_13907} Mlig455_067122 {REF} {Length: 1357} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=443.4]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=220.3]; Ubiquitin-like domain [PF14560.8, score=85.2]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=61.4]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=57.1]; Ubiquitin-like domain [PF18037.3, score=52.8]; DUF2407 ubiquitin-like domain [PF10302.11, score=45.9]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.8, score=32.4]; FlgD Ig-like domain [PF13860.8, score=31.0]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=30.1]; Ubiquitin-like domain [PF18036.3, score=27.4]; Crinkler effector protein N-terminal domain [PF20147.1, score=26.9]; Staphylokinase/Streptokinase family [PF02821.18, score=25.8]; Cilia- and flagella-associated protein 298 [PF11069.10, score=25.6]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=21.2]; GDYXXLXY protein [PF14345.8, score=21.1]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=20.4]; Protein of unknown function (DUF969) [PF06149.14, score=18.8]} {Human: ENSG00000150991, UBC, ubiquitin C, [RH, Score=596, Expect=0.0]} {Mouse: ENSMUSG00000019505, Ubb, ubiquitin B, [RH, Score=596, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=596, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=585, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=2e-51]} {RNA1509_199} {RNA1310_58147} {RNA815_13907} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.222 | 8.69 | 0.60728 | 1.00000 | |
RegionR2 | 0.881 | 8.69 | 0.00282 | 0.04447 | |
RegionR3 | -0.452 | 8.69 | 0.10545 | 0.56805 | |
RegionR4 | -0.709 | 8.69 | 0.02076 | 0.10479 | |
RegionR5 | -0.882 | 8.69 | 0.00157 | 0.01447 | |
RegionR6 | -0.269 | 8.69 | 0.32573 | 0.91377 | |
RegionR7 | 0.825 | 8.69 | 0.00075 | 0.02816 | |
RegionR8 | 0.828 | 8.69 | 0.00190 | 0.07236 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -1.195 | 8.69 | 0.05549 | 0.71415 | |
RegenerationR2 | -0.631 | 8.69 | 0.06569 | 0.41888 | |
RegenerationR3 | -0.132 | 8.69 | 0.70804 | 0.95081 | |
RegenerationR4 | -0.382 | 8.69 | 0.28168 | 0.72705 | |
RegenerationR5 | -0.049 | 8.69 | 0.88865 | 1.00000 | |
RegenerationR6 | -0.19 | 8.69 | 0.58572 | 0.86131 | |
RegenerationBL | -0.276 | 8.69 | 0.36565 | 0.73394 | |
RegenerationTP | -0.854 | 8.69 | 0.01125 | 0.17994 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_37960 | 18230 | 379.78 | Mlig455_067109, Mlig455_067122 | Neo: Int S/G2/M Age: - |
UBC | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_067109 {REF} {Length: 1584} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=550.0]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=271.1]; Ubiquitin-like domain [PF14560.8, score=102.3]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=73.2]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=67.9]; Ubiquitin-like domain [PF18037.3, score=62.0]; DUF2407 ubiquitin-like domain [PF10302.11, score=55.0]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.8, score=38.1]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=35.8]; FlgD Ig-like domain [PF13860.8, score=32.8]; Cilia- and flagella-associated protein 298 [PF11069.10, score=30.1]; Staphylokinase/Streptokinase family [PF02821.18, score=30.0]; Crinkler effector protein N-terminal domain [PF20147.1, score=29.7]; Ubiquitin-like domain [PF18036.3, score=28.7]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=25.0]; GDYXXLXY protein [PF14345.8, score=24.4]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=22.8]; Protein of unknown function (DUF969) [PF06149.14, score=22.4]; Rubisco accumulation factor 1 helix turn helix domain [PF18579.3, score=21.0]; Bacterial Ig domain [PF17957.3, score=20.2]; ORF11CD3 domain [PF10549.11, score=19.6]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=743, Expect=0.0]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=744, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=744, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=733, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=1e-50]} {RNA1509_199} {RNA1310_58147} {RNA815_13907} Mlig455_067122 {REF} {Length: 1357} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=443.4]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=220.3]; Ubiquitin-like domain [PF14560.8, score=85.2]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=61.4]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=57.1]; Ubiquitin-like domain [PF18037.3, score=52.8]; DUF2407 ubiquitin-like domain [PF10302.11, score=45.9]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.8, score=32.4]; FlgD Ig-like domain [PF13860.8, score=31.0]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=30.1]; Ubiquitin-like domain [PF18036.3, score=27.4]; Crinkler effector protein N-terminal domain [PF20147.1, score=26.9]; Staphylokinase/Streptokinase family [PF02821.18, score=25.8]; Cilia- and flagella-associated protein 298 [PF11069.10, score=25.6]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=21.2]; GDYXXLXY protein [PF14345.8, score=21.1]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=20.4]; Protein of unknown function (DUF969) [PF06149.14, score=18.8]} {Human: ENSG00000150991, UBC, ubiquitin C, [RH, Score=596, Expect=0.0]} {Mouse: ENSMUSG00000019505, Ubb, ubiquitin B, [RH, Score=596, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=596, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=585, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=2e-51]} {RNA1509_199} {RNA1310_58147} {RNA815_13907} |
2. | MligTC455_27067 | 130 | 2.7 | Mlig455_009534 | Neo: - Age: - Regeneration-upregulated BL: 5.799 Regeneration-enriched BL: 5.799 |
1.703 | - | - | - | 0.736 | 0.967 | - | Mlig455_009534 {REF} {Length: 1118} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986} | |
3. | MligTC455_42506 | 551 | 11.49 | Mlig455_044711 | Neo: - Age: Up-Down-Down |
SPEN | 0.969 | - | - | - | - | - | 0.969 | Mlig455_044711 {REF} {Length: 13223} {Pfam: SPOC domain [PF07744.15, score=107.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.3]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=224, Expect=2e-57]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=225, Expect=6e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=218, Expect=6e-56]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=190, Expect=1e-47]} {RNA1509_1038, RNA1509_35463} {RNA1310_36.2, RNA1509_35463} {RNA1509_35463, RNA815_326} |
4. | MligTC455_21743 | 695 | 14.47 | Mlig455_068753 | Neo: - Age: - |
CYLD | 0.965 | - | - | - | - | 0.965 | - | Mlig455_068753 {REF} {Length: 4221} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=33.5]} {Human: ENSG00000083799, CYLD, CYLD lysine 63 deubiquitinase, [RH, Score=285, Expect=8e-83]} {Mouse: ENSMUSG00000036712, Cyld, CYLD lysine 63 deubiquitinase, [RH, Score=286, Expect=2e-83]} {Dmel: FBgn0032210, CYLD, Cylindromatosis, [Score=300, Expect=2e-92]} {Celegans: WBGene00009594, cyld-1, CYLinDromatosis (Human disease gene) homolog, [RH, Score=190, Expect=4e-50]} {Smed: dd_Smed_v6_3043_0_1, dd_Smed_v6_3043_0_1, [Score=144, Expect=2e-35]} {RNA1509_13346, RNA1509_29655} {RNA1310_3957.1, RNA1509_29655} {RNA1509_29655, RNA815_1281.1} |
5. | MligTC455_32461 | 372 | 7.74 | Mlig455_066539 | Neo: - Age: Up-Down-Up |
BLVRB | 0.963 | - | - | - | - | 0.963 | - | Mlig455_066539 {REF} {Length: 2393} {TRANSSPLICED} {Pfam: NAD(P)H-binding [PF13460.8, score=112.6]; NmrA-like family [PF05368.15, score=41.6]} {Human: ENSG00000090013, BLVRB, biliverdin reductase B, [RH, Score=64.7, Expect=3e-12]} {Mouse: ENSMUSG00000040466, Blvrb, biliverdin reductase B (flavin reductase (NADPH)), [RH, Score=63.5, Expect=6e-12]} {RNA1509_43611} {RNA1310_56475} {RNA815_16010.1} |
6. | MligTC455_39167 | 4053 | 84.43 | Mlig455_025669, Mlig455_044642, Mlig455_051028 | Neo: - Age: - |
DYNLRB2 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_025669 {REF} {Length: 1077} Mlig455_044642 {REF} {Length: 964} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=81.5]; Ragulator complex protein LAMTOR5 [PF16672.7, score=20.3]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=2e-43]; ENSG00000125971, DYNLRB1, dynein light chain roadblock-type 1, [RH, Score=135, Expect=2e-42]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=137, Expect=1e-43]; ENSMUSG00000047459, Dynlrb1, dynein light chain roadblock-type 1, [RH, Score=132, Expect=1e-41]} {Dmel: FBgn0024196, robl, roadblock, [RH, Score=142, Expect=2e-45]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=98.6, Expect=2e-28]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=140, Expect=6e-45]} {RNA1509_33958, RNA1509_5299, RNA1509_9684} {RNA1310_35265, RNA1509_33958, RNA1509_5299, RNA1509_9684} {RNA1509_33958, RNA1509_5299, RNA1509_9684, RNA815_16397} Mlig455_051028 {REF} {Length: 545} {Pfam: PAN domain [PF00024.28, score=25.5]} {Smed: dd_Smed_v6_32483_0_1, dd_Smed_v6_32483_0_1, [Score=55.5, Expect=1e-09]} {RNA1509_25838} {RNA1310_43302} |
7. | MligTC455_32789 | 222 | 4.62 | Mlig455_052817 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.475 Region-enriched R8: 3.541/0.00213 |
TTN | 0.957 | - | - | - | - | 0.957 | - | Mlig455_052817 {REF} {Length: 13754} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=649.1]; Fibronectin type III domain [PF00041.23, score=640.1]; Immunoglobulin domain [PF13927.8, score=379.0]; Protein kinase domain [PF00069.27, score=228.2]; Immunoglobulin domain [PF13895.8, score=227.2]; Immunoglobulin domain [PF00047.27, score=183.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.4]; Immunoglobulin V-set domain [PF07686.19, score=91.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=69.3]; Tissue factor [PF01108.19, score=67.7]; Natural killer cell receptor 2B4 [PF11465.10, score=56.9]; Fibronectin type III domain [PF16893.7, score=48.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=45.0]; ABC1 atypical kinase-like domain [PF03109.18, score=34.2]; Immunoglobulin domain [PF18452.3, score=33.4]; Y_Y_Y domain [PF07495.15, score=27.2]; Izumo-like Immunoglobulin domain [PF16706.7, score=23.5]; Fungal protein kinase [PF17667.3, score=23.1]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=22.5]; C17orf99 Ig domain [PF17736.3, score=20.0]; Neuron-derived neurotrophic factor [PF10179.11, score=19.4]} {Human: ENSG00000155657, TTN, titin, [Score=1136, Expect=0.0]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=1137, Expect=0.0]} {Dmel: FBgn0005666, bt, bent, [Score=2298, Expect=0.0]} {Celegans: WBGene00006759, unc-22, Twitchin, [Score=2100, Expect=0.0]} {Smed: dd_Smed_v6_2438_0_1, dd_Smed_v6_2438_0_1, [Score=247, Expect=8e-65]} {RNA1509_2768} {RNA1310_67.1} {RNA815_61} |
8. | MligTC455_53293 | 76 | 1.59 | Mlig455_029351 | Neo: - Age: Up-Down-Up |
STK33 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_029351 {REF} {Length: 1597} {Pfam: Protein kinase domain [PF00069.27, score=209.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.3]; RIO1 family [PF01163.24, score=19.0]} {Human: ENSG00000130413, STK33, serine/threonine kinase 33, [RH, Score=187, Expect=3e-54]} {Mouse: ENSMUSG00000031027, Stk33, serine/threonine kinase 33, [Score=189, Expect=3e-55]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=140, Expect=9e-38]} {Celegans: WBGene00009326, F32D8.1, [Score=140, Expect=3e-38]} {Smed: dd_Smed_v6_12461_0_1, dd_Smed_v6_12461_0_1, [RH, Score=219, Expect=1e-68]} {RNA1310_19666.1} {RNA815_13479} |
9. | MligTC455_28124 | 49 | 1.02 | Mlig455_017925 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_017925 {REF} {Length: 1659} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} | |
10. | MligTC455_40810 | 75 | 1.56 | Mlig455_009123, Mlig455_021293 | Neo: - Age: Up-Down-Down |
NYNRIN | 0.954 | - | - | - | 0.954 | - | - | Mlig455_009123 {REF} {Length: 6436} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=69.5]; Integrase zinc binding domain [PF17921.3, score=53.2]; Integrase core domain [PF00665.28, score=44.5]; H2C2 zinc finger [PF09337.12, score=20.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.6, Expect=5e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=314, Expect=2e-90]} {RNA1509_37150} {RNA1310_27350} {RNA815_53591} Mlig455_021293 {REF} {Length: 3539} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.7]; Integrase zinc binding domain [PF17921.3, score=53.3]; Integrase core domain [PF00665.28, score=44.5]; H2C2 zinc finger [PF09337.12, score=20.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=75.1, Expect=8e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=70.1, Expect=2e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=313, Expect=3e-90]} {RNA1509_24311} {RNA1310_18657.1} {RNA815_49943} |
11. | MligTC455_56997 | 40 | 0.84 | Mlig455_017357 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_017357 {REF} {Length: 266} {NoTransDecoderORF} | |
12. | MligTC455_10306 | 37 | 0.76 | Mlig455_062778 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_062778 {REF} {Length: 1644} {RNA1509_48973} {RNA1310_22428.2} {RNA815_17155.1} | |
13. | MligTC455_52863 | 294 | 6.13 | Mlig455_032725 | Neo: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_032725 {REF} {Length: 3157} {RNA1509_57987} {RNA1310_22434.1} {RNA815_10826} | |
14. | MligTC455_45346 | 480 | 9.99 | Mlig455_003810, Mlig455_033273 | Neo: - Age: logFC(26M/2M)=-0.601 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_003810 {REF} {Length: 2643} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=38.7]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584} Mlig455_033273 {REF} {Length: 1124} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=37.8]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584} |