M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_45346

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45346 480 9.99 Mlig455_003810, Mlig455_033273

Neo: -

Age: logFC(26M/2M)=-0.601

Mlig455_003810 {REF} {Length: 2643} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=38.7]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584}

Mlig455_033273 {REF} {Length: 1124} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=37.8]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584}

Cumulative graph for MligTC455_45346

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.051 3.598 0.32352 0.97293
RegionR2 0.156 3.598 0.75858 1.00000
RegionR3 0.128 3.598 0.75521 1.00000
RegionR4 -0.592 3.598 0.24579 0.54404
RegionR5 -0.734 3.598 0.08479 0.27257
RegionR6 -0.405 3.598 0.37719 0.95779
RegionR7 0.786 3.598 0.13385 0.68810
RegionR8 -0.39 3.598 0.65060 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.339 3.598 0.01885 0.55185
RegenerationR2 -0.634 3.598 0.14614 0.57775
RegenerationR3 -0.668 3.598 0.16619 0.60048
RegenerationR4 0.115 3.598 0.81060 0.98978
RegenerationR5 0 3.598 0.99632 1.00000
RegenerationR6 -0.693 3.598 0.19032 0.52818
RegenerationBL 0.069 3.598 0.90644 1.00000
RegenerationTP -0.336 3.598 0.62105 0.97307


Genes with expression patterns similar to MligTC455_45346

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45346 480 9.99 Mlig455_003810, Mlig455_033273

Neo: -

Age: logFC(26M/2M)=-0.601

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_003810 {REF} {Length: 2643} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=38.7]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584}

Mlig455_033273 {REF} {Length: 1124} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=37.8]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584}
2. MligTC455_17997 249 5.18 Mlig455_031355

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.965

Regeneration-downregulated R6: -3.161

Regeneration-depleted R6: -3.161

 ANK2 1.808 - - 0.951 - 0.857 - Mlig455_031355 {REF} {Length: 3392} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=225.1]; Ankyrin repeats (many copies) [PF13637.8, score=151.6]; Ankyrin repeat [PF00023.32, score=151.0]; Ankyrin repeat [PF13606.8, score=136.9]; Ankyrin repeats (many copies) [PF13857.8, score=128.5]; Caspase domain [PF00656.24, score=64.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=117, Expect=3e-26]; ENSG00000151150, ANK3, ankyrin 3, [Score=113, Expect=7e-25]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=127, Expect=2e-29]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=130, Expect=1e-30]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=120, Expect=1e-27]} {Smed: dd_Smed_v6_2072_0_24, dd_Smed_v6_2072_0_24, [Score=115, Expect=5e-26]} {RNA1509_59314, RNA1509_6998} {RNA1310_4219, RNA1509_59314, RNA1509_6998} {RNA1509_59314, RNA1509_6998, RNA815_1303}
3. MligTC455_52540 588 12.24 Mlig455_066987

Neo: -

Age: -

 TULP4 1.765 - - - - 0.783 0.982 Mlig455_066987 {REF} {Length: 4354} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=88.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.9]} {Human: ENSG00000130338, TULP4, tubby like protein 4, [RH, Score=243, Expect=5e-66]} {Mouse: ENSMUSG00000034377, Tulp4, tubby like protein 4, [RH, Score=242, Expect=8e-66]} {Dmel: FBgn0039530, Tusp, [RH, Score=248, Expect=8e-68]} {Celegans: WBGene00022139, tub-2, TUBby-related, [RH, Score=98.6, Expect=4e-22]} {Smed: dd_Smed_v6_18217_0_1, dd_Smed_v6_18217_0_1, [RH, Score=114, Expect=8e-26]} {RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1310_4370.1, RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1509_50986, RNA1509_52335, RNA1509_9068, RNA815_13995}
4. MligTC455_51626 987 20.57 Mlig455_013225, Mlig455_013252, Mlig455_013320

Neo: -

Age: logFC(26M/2M)=-0.416

 NRG2 1.758 - - 0.957 - 0.801 -

Mlig455_013225 {REF} {Length: 3859} {Pfam: Immunoglobulin domain [PF13927.8, score=39.3]; Immunoglobulin I-set domain [PF07679.18, score=32.1]; Immunoglobulin domain [PF00047.27, score=29.5]; Immunoglobulin domain [PF13895.8, score=27.4]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=99.0, Expect=8e-21]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=93.2, Expect=7e-20]} {Dmel: FBgn0003984, vn, vein, [Score=65.9, Expect=6e-11]} {RNA1509_20317} {RNA1310_6062.1} {RNA815_3326.1}

Mlig455_013252 {REF} {Length: 3213} {Pfam: Immunoglobulin domain [PF13927.8, score=38.7]; Immunoglobulin I-set domain [PF07679.18, score=31.7]; Immunoglobulin domain [PF00047.27, score=29.2]; Immunoglobulin domain [PF13895.8, score=27.3]} {Human: ENSG00000158458, NRG2, neuregulin 2, [Score=98.2, Expect=2e-20]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [Score=92.4, Expect=6e-19]} {Dmel: FBgn0003984, vn, vein, [Score=65.1, Expect=1e-10]} {RNA1509_20317} {RNA1310_18314.1} {RNA815_3326.1}

Mlig455_013320 {REF} {Length: 4084} {Pfam: Immunoglobulin domain [PF13927.8, score=38.9]; Immunoglobulin I-set domain [PF07679.18, score=31.8]; Immunoglobulin domain [PF00047.27, score=29.3]; Immunoglobulin domain [PF13895.8, score=27.4]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=99.8, Expect=5e-21]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=93.6, Expect=6e-20]} {Dmel: FBgn0003984, vn, vein, [Score=65.9, Expect=7e-11]} {RNA1509_20317} {RNA1310_6062.1, RNA1509_20317} {RNA1509_20317, RNA815_3326.1}
5. MligTC455_41062 677 14.11 Mlig455_041909

Neo: -

Age: -

 DDO 0.972 - - 0.972 - - - Mlig455_041909 {REF} {Length: 2011} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=120.3]} {Human: ENSG00000203797, DDO, D-aspartate oxidase, [RH, Score=209, Expect=1e-63]} {Mouse: ENSMUSG00000063428, Ddo, D-aspartate oxidase, [RH, Score=209, Expect=3e-64]} {Dmel: FBgn0031860, CG11236, [RH, Score=209, Expect=2e-64]} {Celegans: WBGene00022076, daao-1, D-amino-acid oxidase, [RH, Score=190, Expect=2e-57]} {Smed: dd_Smed_v6_3560_0_1, dd_Smed_v6_3560_0_1, [Score=232, Expect=1e-73]} {RNA1509_55945} {RNA1310_24184} {RNA815_11174}
6. MligTC455_22985 342 7.13 Mlig455_057165

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=-0.489

 0.971 - - - - - 0.971 Mlig455_057165 {REF} {Length: 2740} {NoTransDecoderORF} {RNA1509_27555, RNA1509_53123} {RNA1310_41935.1, RNA1509_27555, RNA1509_53123} {RNA1509_27555, RNA1509_53123, RNA815_30388}
7. MligTC455_22425 107 2.23 Mlig455_009639

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_009639 {REF} {Length: 337} {TRANSSPLICED}
8. MligTC455_29698 153 3.19 Mlig455_038104

Neo: -

Age: logFC(26M/2M)=-0.330

 ANKRD17 0.966 - - 0.966 - - - Mlig455_038104 {REF} {Length: 7732} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=444.0]; Ankyrin repeats (many copies) [PF13637.8, score=254.7]; Ankyrin repeats (many copies) [PF13857.8, score=146.5]; Ankyrin repeat [PF13606.8, score=141.2]; Transcription factor BRX N-terminal domain [PF13713.8, score=129.7]; Ankyrin repeat [PF00023.32, score=103.7]; Domain of unknown function (DUF4476) [PF14771.8, score=54.5]; Mab-21 protein [PF03281.16, score=36.7]; HEAT repeats [PF13646.8, score=20.0]; Protein of unknown function (DUF3307) [PF11750.10, score=18.9]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=167, Expect=1e-40]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=166, Expect=2e-40]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=114, Expect=7e-25]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=120, Expect=8e-27]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=160, Expect=2e-39]} {RNA1509_27730, RNA1509_55013} {RNA1310_21755.1, RNA1509_55013} {RNA1509_55013, RNA815_2426.1}
9. MligTC455_46780 396 8.26 Mlig455_044008

Neo: -

Age: Up-Down-Down

 0.963 - - 0.963 - - - Mlig455_044008 {REF} {Length: 5261} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=28.9]} {Dmel: FBgn0034420, CG10737, [RH, Score=70.9, Expect=4e-12]} {Smed: dd_Smed_v6_6358_0_1, dd_Smed_v6_6358_0_1, [Score=55.1, Expect=1e-07]} {RNA1509_17372} {RNA1310_6655, RNA1509_17372} {RNA1509_17372, RNA815_21591}
10. MligTC455_42351 126 2.62 Mlig455_014089

Neo: -

Age: Up-Down-Down

 BMP1 0.96 - - 0.960 - - - Mlig455_014089 {REF} {Length: 6334} {Pfam: CUB domain [PF00431.22, score=147.3]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=107, Expect=7e-23]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=97.8, Expect=3e-20]; ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=95.9, Expect=1e-19]} {Dmel: FBgn0261262, CG42613, [Score=274, Expect=4e-77]} {Celegans: WBGene00002977, lev-10, LEV-10B, [Score=235, Expect=6e-65]} {Smed: dd_Smed_v6_11447_0_1, dd_Smed_v6_11447_0_1, [Score=401, Expect=2e-123]} {RNA1509_7178} {RNA1310_25466} {RNA815_477.1}
11. MligTC455_15991 104 2.17 Mlig455_022050

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_022050 {REF} {Length: 2331} {RNA1509_41203} {RNA1310_21857, RNA1509_41203} {RNA1509_41203, RNA815_12774}
12. MligTC455_40817 463 9.65 Mlig455_013525, Mlig455_061407

Neo: -

Age: -

 0.957 - - 0.957 - - -

Mlig455_013525 {REF} {Length: 1672} {RNA1509_18365} {RNA1310_18284.1} {RNA815_7044.1}

Mlig455_061407 {REF} {Length: 1668} {TRANSSPLICED} {RNA1509_18365} {RNA1310_18284.1, RNA1509_18365} {RNA1509_18365, RNA815_7044.1}
13. MligTC455_37662 100 2.08 Mlig455_070644

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_070644 {REF} {Length: 799} {RNA1509_57509} {RNA1310_44297} {RNA815_33826}
14. MligTC455_35442 359 7.49 Mlig455_037038

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_037038 {REF} {Length: 2728} {Pfam: Acyltransferase family [PF01757.24, score=100.8]; Nose resistant-to-fluoxetine protein, N-terminal domain [PF20146.1, score=67.3]} {Mouse: ENSMUSG00000046610, Oacyl, O-acyltransferase like, [Score=169, Expect=1e-43]} {Dmel: FBgn0052645, CG32645, [Score=259, Expect=3e-74]} {Celegans: WBGene00007833, oac-6, O-ACyltransferase homolog, [RH, Score=235, Expect=1e-66]} {RNA1509_19999} {RNA1310_7490.1, RNA1509_19999} {RNA1509_19999, RNA815_17892}
15. MligTC455_41942 3252 67.74 Mlig455_030861

Neo: -

Age: -

 MAD1L1 0.952 - - - - 0.952 - Mlig455_030861 {REF} {Length: 3718} {TRANSSPLICED} {Pfam: Mitotic checkpoint protein [PF05557.15, score=130.8]} {Human: ENSG00000002822, MAD1L1, mitotic arrest deficient 1 like 1, [RH, Score=92.8, Expect=1e-18]} {Dmel: FBgn0026326, Mad1, Mitotic arrest-deficient 1, [RH, Score=65.5, Expect=2e-10]} {RNA1509_21631} {RNA1310_5312} {RNA815_1674}
16. MligTC455_42102 930 19.38 Mlig455_045887

Neo: -

Age: logFC(26M/2M)=-0.310

 CASP7 0.952 - - 0.952 - - - Mlig455_045887 {REF} {Length: 2351} {Pfam: Caspase domain [PF00656.24, score=70.4]; Lecithin retinol acyltransferase [PF04970.15, score=43.8]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=99.0, Expect=2e-22]; ENSG00000164305, CASP3, caspase 3, [Score=98.6, Expect=2e-22]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=100, Expect=6e-23]; ENSMUSG00000031628, Casp3, caspase 3, [Score=99.0, Expect=1e-22]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=78.2, Expect=2e-15]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=98.2, Expect=5e-23]} {RNA1509_54325, RNA1509_54631} {RNA1310_1479.1, RNA1509_54325, RNA1509_54631} {RNA1509_54325, RNA1509_54631, RNA815_4880}
17. MligTC455_42749 3668 76.41 Mlig455_061319

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.194

 EFCAB1 0.952 - - - - 0.952 - Mlig455_061319 {REF} {Length: 1137} {Pfam: EF hand [PF00036.34, score=56.5]; EF-hand domain [PF13405.8, score=55.2]; EF-hand domain pair [PF13499.8, score=51.3]; EF-hand domain pair [PF13833.8, score=45.2]; EF hand [PF13202.8, score=43.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.6]} {Human: ENSG00000034239, EFCAB1, EF-hand calcium binding domain 1, [RH, Score=187, Expect=1e-59]} {Mouse: ENSMUSG00000068617, Efcab1, EF-hand calcium binding domain 1, [RH, Score=186, Expect=3e-59]} {Dmel: FBgn0029995, CG2256, [Score=158, Expect=4e-47]} {Celegans: WBGene00003565, ncs-3, Neuronal Calcium Sensor family, [Score=65.9, Expect=3e-13]} {Smed: dd_Smed_v6_5488_0_1, dd_Smed_v6_5488_0_1, [RH, Score=242, Expect=1e-81]} {RNA1509_12780} {RNA1310_30442} {RNA815_14317}
18. MligTC455_48576 4801 100.02 Mlig455_006339, Mlig455_006387, Mlig455_009505, Mlig455_018246, Mlig455_018573, Mlig455_026998, Mlig455_028762, Mlig455_029752, Mlig455_030818, Mlig455_030834, Mlig455_030912, Mlig455_031709, Mlig455_032943, Mlig455_034832, Mlig455_046541, Mlig455_049622, Mlig455_052100, Mlig455_059993, Mlig455_067920

Neo: -

Age: -

 0.952 - - 0.952 - - -

Mlig455_006339 {REF} {Length: 404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_006387 {REF} {Length: 408} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_009505 {REF} {Length: 411} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.2} {RNA815_23469.1}

Mlig455_018246 {REF} {Length: 411} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.2} {RNA815_23469.1}

Mlig455_018573 {REF} {Length: 397} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.7} {RNA815_23469.1}

Mlig455_026998 {REF} {Length: 404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_028762 {REF} {Length: 404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_029752 {REF} {Length: 410} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_030818 {REF} {Length: 411} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.5} {RNA815_23469.1}

Mlig455_030834 {REF} {Length: 410} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.5} {RNA815_23469.1}

Mlig455_030912 {REF} {Length: 700} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_24960} {RNA815_23469.2}

Mlig455_031709 {REF} {Length: 404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_032943 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.5} {RNA815_23469.1}

Mlig455_034832 {REF} {Length: 364} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.5} {RNA815_23469.1}

Mlig455_046541 {REF} {Length: 402} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_049622 {REF} {Length: 826} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.5} {RNA815_23469.1}

Mlig455_052100 {REF} {Length: 399} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}

Mlig455_059993 {REF} {Length: 406} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.6} {RNA815_23469.1}

Mlig455_067920 {REF} {Length: 404} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19670} {RNA1310_86910.3} {RNA815_23469.1}
19. MligTC455_20247 529 11.02 Mlig455_058977

Neo: -

Age: -

Region-enriched R5: 1.654/0.00639

 NUDT5 0.951 - - - - - 0.951 Mlig455_058977 {REF} {Length: 1303} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=55.7]} {Human: ENSG00000165609, NUDT5, nudix hydrolase 5, [RH, Score=107, Expect=1e-28]} {Mouse: ENSMUSG00000025817, Nudt5, nudix (nucleoside diphosphate linked moiety X)-type motif 5, [RH, Score=107, Expect=2e-28]} {Celegans: WBGene00003579, ndx-2, Putative nudix hydrolase 2, [RH, Score=95.1, Expect=5e-24]} {RNA1509_40193, RNA1509_54065} {RNA1310_36192, RNA1509_40193, RNA1509_54065} {RNA1509_40193, RNA1509_54065, RNA815_17837}
20. MligTC455_14655 504 10.51 Mlig455_032155, Mlig455_032161

Neo: -

Age: Down-Down-Up

 0.95 - - 0.950 - - -

Mlig455_032155 {REF} {Length: 977} {Pfam: Ectodermal ciliogenesis protein [PF15795.7, score=76.8]} {RNA1310_42665.1} {RNA815_17724}

Mlig455_032161 {REF} {Length: 351} {NoTransDecoderORF} {RNA1310_42665.2} {RNA815_17724}
21. MligTC455_37960 18230 379.78 Mlig455_067109, Mlig455_067122

Neo: Int S/G2/M

Age: -

 UBC 0.95 - - - - 0.950 -

Mlig455_067109 {REF} {Length: 1584} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=550.0]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=271.1]; Ubiquitin-like domain [PF14560.8, score=102.3]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=73.2]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=67.9]; Ubiquitin-like domain [PF18037.3, score=62.0]; DUF2407 ubiquitin-like domain [PF10302.11, score=55.0]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.8, score=38.1]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=35.8]; FlgD Ig-like domain [PF13860.8, score=32.8]; Cilia- and flagella-associated protein 298 [PF11069.10, score=30.1]; Staphylokinase/Streptokinase family [PF02821.18, score=30.0]; Crinkler effector protein N-terminal domain [PF20147.1, score=29.7]; Ubiquitin-like domain [PF18036.3, score=28.7]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=25.0]; GDYXXLXY protein [PF14345.8, score=24.4]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=22.8]; Protein of unknown function (DUF969) [PF06149.14, score=22.4]; Rubisco accumulation factor 1 helix turn helix domain [PF18579.3, score=21.0]; Bacterial Ig domain [PF17957.3, score=20.2]; ORF11CD3 domain [PF10549.11, score=19.6]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=743, Expect=0.0]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=744, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=744, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=733, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=1e-50]} {RNA1509_199} {RNA1310_58147} {RNA815_13907}

Mlig455_067122 {REF} {Length: 1357} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=443.4]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=220.3]; Ubiquitin-like domain [PF14560.8, score=85.2]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=61.4]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=57.1]; Ubiquitin-like domain [PF18037.3, score=52.8]; DUF2407 ubiquitin-like domain [PF10302.11, score=45.9]; Silencing defective 2 N-terminal ubiquitin domain [PF13019.8, score=32.4]; FlgD Ig-like domain [PF13860.8, score=31.0]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=30.1]; Ubiquitin-like domain [PF18036.3, score=27.4]; Crinkler effector protein N-terminal domain [PF20147.1, score=26.9]; Staphylokinase/Streptokinase family [PF02821.18, score=25.8]; Cilia- and flagella-associated protein 298 [PF11069.10, score=25.6]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=21.2]; GDYXXLXY protein [PF14345.8, score=21.1]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=20.4]; Protein of unknown function (DUF969) [PF06149.14, score=18.8]} {Human: ENSG00000150991, UBC, ubiquitin C, [RH, Score=596, Expect=0.0]} {Mouse: ENSMUSG00000019505, Ubb, ubiquitin B, [RH, Score=596, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=596, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [Score=585, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=2e-51]} {RNA1509_199} {RNA1310_58147} {RNA815_13907}
22. MligTC455_53578 83 1.72 Mlig455_014070

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_014070 {REF} {Length: 722} {NoTransDecoderORF} {RNA1310_59022.1} {RNA815_38800}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA