TomoSeq data search

Data search

Results for MligTC455_38041

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38041

221

4.61

Mlig455_050363

Neo: -

Age: -

PITPNM1

Mlig455_050363 {REF} {Length: 6960} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=355.5]; DDHD domain [PF02862.19, score=125.1]} {Human: ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000024851, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=940, Expect=0.0]; ENSMUSG00000097096, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=940, Expect=0.0]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [RH, Score=644, Expect=0.0]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=385, Expect=5e-115]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [RH, Score=961, Expect=0.0]} {RNA1509_13228} {RNA1310_1072, RNA1509_13228} {RNA1509_13228, RNA815_6615}

Cumulative graph for MligTC455_38041

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.755	2.539	0.17311	0.79867
RegionR2	0.872	2.539	0.24791	0.62547
RegionR3	-0.892	2.539	0.11239	0.58343
RegionR4	-1.371	2.539	0.08432	0.27456
RegionR5	-1.052	2.539	0.03574	0.14689
RegionR6	-0.5	2.539	0.40677	0.97634
RegionR7	0.049	2.539	0.92429	1.00000
RegionR8	1.139	2.539	0.16696	0.73921

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.754	2.539	0.26586	0.97007
RegenerationR2	-0.762	2.539	0.31297	0.75246
RegenerationR3	0.747	2.539	0.33621	0.76119
RegenerationR4	-0.835	2.539	0.34570	0.77662
RegenerationR5	0.108	2.539	0.85563	1.00000
RegenerationR6	0.202	2.539	0.79352	0.97389
RegenerationBL	-4.896	2.539	0.03605	0.21412
RegenerationTP	0.172	2.539	0.84685	1.00000

Genes with expression patterns similar to MligTC455_38041

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38041	221	4.61	Mlig455_050363	Neo: - Age: -	PITPNM1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_050363 {REF} {Length: 6960} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=355.5]; DDHD domain [PF02862.19, score=125.1]} {Human: ENSG00000110697, PITPNM1, phosphatidylinositol transfer protein membrane associated 1, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000024851, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=940, Expect=0.0]; ENSMUSG00000097096, Pitpnm1, phosphatidylinositol transfer protein, membrane-associated 1, [RH, Score=940, Expect=0.0]} {Dmel: FBgn0003218, rdgB, retinal degeneration B, [RH, Score=644, Expect=0.0]} {Celegans: WBGene00010813, pitp-1, PhosphatidylInositol Transfer Protein family, [RH, Score=385, Expect=5e-115]} {Smed: dd_Smed_v6_7211_0_2, dd_Smed_v6_7211_0_2, [RH, Score=961, Expect=0.0]} {RNA1509_13228} {RNA1310_1072, RNA1509_13228} {RNA1509_13228, RNA815_6615}
2.	MligTC455_40520	207	4.32	Mlig455_053211	Neo: - Age: Down-Up-Down, logFC(26M/2M)=2.096		0.955	-	-	-	-	0.955	-	Mlig455_053211 {REF} {Length: 1561} {RNA1509_11880} {RNA1310_18623, RNA1509_11880} {RNA1509_11880, RNA815_8546}
3.	MligTC455_04105	260	5.43	Mlig455_029081	Neo: Int S/G2/M Age: - Region-enriched R5: 2.109/0.00002	TMEM201	0.954	-	-	-	0.954	-	-	Mlig455_029081 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=111.3]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=131, Expect=1e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=124, Expect=3e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=2e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=8e-25]} {RNA1509_19432, RNA1509_46930} {RNA1310_12592, RNA1509_46930} {RNA1509_46930, RNA815_559.1}
4.	MligTC455_35723	203	4.22	Mlig455_050374	Neo: Int S/G2/M Age: - Region-enriched R5: 2.034/0.04360		0.954	-	-	-	-	0.954	-	Mlig455_050374 {REF} {Length: 4703} {TRANSSPLICED} {RNA1509_23344} {RNA1310_3613, RNA1509_23344} {RNA1509_23344, RNA815_8670}
5.	MligTC455_40828	172	3.59	Mlig455_004004	Neo: - Age: -	PRR9	0.954	-	-	-	-	0.954	-	Mlig455_004004 {REF} {Length: 3347} {TRANSSPLICED} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.4, Expect=1e-05]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=56.2, Expect=4e-08]} {Celegans: WBGene00018026, F35A5.4, [Score=59.7, Expect=2e-09]} {RNA1509_48842} {RNA1310_15248} {RNA815_5852}
6.	MligTC455_32982	874	18.2	Mlig455_049353	Neo: Int S/G2/M Age: Down-Up-Up Region-specific R5: 2.632 Region-enriched R5: 2.506/0.00000	H2AFX	0.953	-	-	-	0.953	-	-	Mlig455_049353 {REF} {Length: 1228} {Pfam: C-terminus of histone H2A [PF16211.7, score=72.2]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=57.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=24.7]} {Human: ENSG00000188486, H2AFX, H2A histone family member X, [Score=231, Expect=4e-79]; ENSG00000278677, HIST1H2AM, histone cluster 1 H2A family member m, [Score=224, Expect=2e-76]; ENSG00000196747, HIST1H2AI, histone cluster 1 H2A family member i, [Score=224, Expect=2e-76]; ENSG00000276903, HIST1H2AL, histone cluster 1 H2A family member l, [Score=224, Expect=2e-76]; ENSG00000196787, HIST1H2AG, histone cluster 1 H2A family member g, [Score=224, Expect=2e-76]; ENSG00000274997, HIST1H2AH, histone cluster 1 H2A family member h, [Score=224, Expect=1e-76]; ENSG00000275221, HIST1H2AK, histone cluster 1 H2A family member k, [Score=224, Expect=2e-76]; ENSG00000276368, HIST1H2AJ, histone cluster 1 H2A family member j, [Score=224, Expect=9e-77]; ENSG00000282988, AL031777.3, novel protein, [Score=224, Expect=3e-76]; ENSG00000164508, HIST1H2AA, histone cluster 1 H2A family member a, [Score=223, Expect=3e-76]; ENSG00000196866, HIST1H2AD, histone cluster 1 H2A family member d, [Score=223, Expect=4e-76]; ENSG00000184270, HIST2H2AB, histone cluster 2 H2A family member b, [Score=223, Expect=2e-76]; ENSG00000180573, HIST1H2AC, histone cluster 1 H2A family member c, [Score=222, Expect=1e-75]; ENSG00000272196, HIST2H2AA4, histone cluster 2 H2A family member a4, [Score=222, Expect=1e-75]; ENSG00000278463, HIST1H2AB, histone cluster 1 H2A family member b, [Score=222, Expect=7e-76]; ENSG00000277075, HIST1H2AE, histone cluster 1 H2A family member e, [Score=222, Expect=7e-76]; ENSG00000184260, HIST2H2AC, histone cluster 2 H2A family member c, [Score=222, Expect=8e-76]; ENSG00000203812, HIST2H2AA3, histone cluster 2 H2A family member a3, [Score=222, Expect=1e-75]; ENSG00000181218, HIST3H2A, histone cluster 3 H2A, [Score=221, Expect=2e-75]; ENSG00000284841, HIST3H2A, histone cluster 3 H2A, [Score=221, Expect=2e-75]; ENSG00000246705, H2AFJ, H2A histone family member J, [Score=221, Expect=1e-75]} {Mouse: ENSMUSG00000049932, H2afx, H2A histone family, member X, [Score=231, Expect=4e-79]; ENSMUSG00000069302, Hist1h2ah, histone cluster 1, H2ah, [Score=223, Expect=4e-76]; ENSMUSG00000063689, Hist2h2ab, histone cluster 2, H2ab, [Score=223, Expect=2e-76]; ENSMUSG00000061615, Hist1h2ab, histone cluster 1, H2ab, [Score=222, Expect=5e-76]; ENSMUSG00000071516, Hist1h2ai, histone cluster 1, H2ai, [Score=222, Expect=5e-76]; ENSMUSG00000069301, Hist1h2ag, histone cluster 1, H2ag, [Score=222, Expect=5e-76]; ENSMUSG00000069272, Hist1h2ae, histone cluster 1, H2ae, [Score=222, Expect=5e-76]; ENSMUSG00000094248, Hist1h2ao, histone cluster 1, H2ao, [Score=222, Expect=5e-76]; ENSMUSG00000069270, Hist1h2ac, histone cluster 1, H2ac, [Score=222, Expect=5e-76]; ENSMUSG00000063954, Hist2h2aa2, histone cluster 2, H2aa2, [Score=222, Expect=7e-76]; ENSMUSG00000061991, Hist1h2af, histone cluster 1, H2af, [Score=222, Expect=8e-76]; ENSMUSG00000063021, Hist1h2ak, histone cluster 1, H2ak, [Score=222, Expect=5e-76]; ENSMUSG00000064220, Hist2h2aa1, histone cluster 2, H2aa1, [Score=222, Expect=7e-76]; ENSMUSG00000069309, Hist1h2an, histone cluster 1, H2an, [Score=222, Expect=5e-76]; ENSMUSG00000071478, Hist1h2ad, histone cluster 1, H2ad, [Score=222, Expect=5e-76]; ENSMUSG00000094777, Hist1h2ap, histone cluster 1, H2ap, [Score=222, Expect=5e-76]; ENSMUSG00000068855, Hist2h2ac, histone cluster 2, H2ac, [Score=222, Expect=5e-76]; ENSMUSG00000060032, H2afj, H2A histone family, member J, [Score=221, Expect=2e-75]; ENSMUSG00000078851, Hist3h2a, histone cluster 3, H2a, [Score=221, Expect=2e-75]} {Dmel: FBgn0053814, His2A:CG33814, [Score=206, Expect=5e-70]} {Celegans: WBGene00001890, his-16, Histone H2A, [Score=202, Expect=3e-68]} {Smed: dd_Smed_v6_7383_0_1, dd_Smed_v6_7383_0_1, [Score=223, Expect=1e-76]} {RNA1509_39546, RNA1509_53175, RNA1509_60064, RNA1509_9415} {RNA1310_20333.1, RNA1509_39546, RNA1509_53175, RNA1509_60064, RNA1509_9415} {RNA1509_39546, RNA1509_53175, RNA1509_60064, RNA1509_9415, RNA815_12044.1}
7.	MligTC455_47454	117	2.43	Mlig455_064549	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_064549 {REF} {Length: 455} {NoTransDecoderORF} {RNA1310_142186}
8.	MligTC455_48393	87	1.81	Mlig455_026984	Neo: - Age: Up-Down-Down	PRR9	0.952	-	-	-	0.952	-	-	Mlig455_026984 {REF} {Length: 3416} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=8e-07]} {RNA1509_23293} {RNA1310_8635.1} {RNA815_14593.1}
9.	MligTC455_21036	7843	163.39	Mlig455_057458	Neo: Int S/G2/M Age: -		0.951	-	-	-	-	0.951	-	Mlig455_057458 {REF} {Length: 320} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_712} {RNA1310_95473} {RNA815_49240}
10.	MligTC455_11315	154	3.2	Mlig455_027636, Mlig455_027650, Mlig455_036368, Mlig455_069999	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_027636 {REF} {Length: 1407} {RNA1509_40399} {RNA1310_60387} {RNA815_44351} Mlig455_027650 {REF} {Length: 1408} {RNA1509_40399} {RNA1310_60387} {RNA815_44351} Mlig455_036368 {REF} {Length: 592} {RNA1310_60387} {RNA815_44351} Mlig455_069999 {REF} {Length: 998} {RNA1310_60387} {RNA815_44351}

Berezikov Lab - 2020-2021 © ERIBA