Data search
Results for MligTC455_38101
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38101 | 253 | 5.26 | Mlig455_022140 | Neo: - Age: Down-Up-Down |
PABPC4 | Mlig455_022140 {REF} {Length: 2639} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=73.0]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=75.1, Expect=7e-15]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=74.3, Expect=1e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=74.3, Expect=9e-15]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=95.1, Expect=4e-23]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=95.1, Expect=5e-22]} {Celegans: WBGene00001368, exc-7, [Score=83.2, Expect=4e-18]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=5e-08]} {RNA1509_12117, RNA1509_58617} {RNA1310_20351.1, RNA1509_58617} {RNA1509_58617, RNA815_17342} |
Cumulative graph for MligTC455_38101
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.992 | 2.779 | 0.49438 | 1.00000 | |
| RegionR2 | 0.583 | 2.779 | 0.40839 | 0.80167 | |
| RegionR3 | -0.32 | 2.779 | 0.56742 | 1.00000 | |
| RegionR4 | -0.98 | 2.779 | 0.11262 | 0.33259 | |
| RegionR5 | 0.624 | 2.779 | 0.17728 | 0.45187 | |
| RegionR6 | -0.07 | 2.779 | 0.90102 | 1.00000 | |
| RegionR7 | 0.761 | 2.779 | 0.24888 | 0.87496 | |
| RegionR8 | 0.392 | 2.779 | 0.64420 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.844 | 2.779 | 0.38924 | 1.00000 | |
| RegenerationR2 | -1.098 | 2.779 | 0.09379 | 0.48804 | |
| RegenerationR3 | 0.397 | 2.779 | 0.54870 | 0.88293 | |
| RegenerationR4 | -0.397 | 2.779 | 0.54286 | 0.88962 | |
| RegenerationR5 | -0.593 | 2.779 | 0.30050 | 0.72764 | |
| RegenerationR6 | -0.039 | 2.779 | 0.95553 | 1.00000 | |
| RegenerationBL | -0.668 | 2.779 | 0.45732 | 0.82501 | |
| RegenerationTP | -0.254 | 2.779 | 0.76240 | 1.00000 |
Genes with expression patterns similar to MligTC455_38101
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38101 | 253 | 5.26 | Mlig455_022140 | Neo: - Age: Down-Up-Down |
PABPC4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_022140 {REF} {Length: 2639} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=73.0]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=75.1, Expect=7e-15]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=74.3, Expect=1e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=74.3, Expect=9e-15]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=95.1, Expect=4e-23]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=95.1, Expect=5e-22]} {Celegans: WBGene00001368, exc-7, [Score=83.2, Expect=4e-18]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=5e-08]} {RNA1509_12117, RNA1509_58617} {RNA1310_20351.1, RNA1509_58617} {RNA1509_58617, RNA815_17342} |
| 2. | MligTC455_38102 | 357 | 7.44 | Mlig455_044855 | Neo: - Age: - |
PABPC4 | 2.619 | - | 0.951 | - | 0.813 | - | 0.855 | Mlig455_044855 {REF} {Length: 2615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=72.4]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=72.8, Expect=4e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=70.5, Expect=2e-13]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=70.1, Expect=2e-13]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=94.0, Expect=1e-22]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=94.0, Expect=1e-21]} {Celegans: WBGene00001368, exc-7, [Score=81.6, Expect=1e-17]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=4e-08]} {RNA1509_12117} {RNA1310_20351.1} {RNA815_17342} |
| 3. | MligTC455_44338 | 719 | 14.98 | Mlig455_041655 | Neo: Irradiation Age: - Region-enriched R5: 2.104/0.00000 |
TECTB | 1.853 | - | 0.956 | - | - | - | 0.897 | Mlig455_041655 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: Zona pellucida-like domain [PF00100.25, score=93.9]} {Human: ENSG00000119913, TECTB, tectorin beta, [RH, Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000024979, Tectb, tectorin beta, [RH, Score=48.9, Expect=3e-06]} {RNA1509_39057, RNA1509_7245} {RNA1310_6151.1, RNA1509_39057, RNA1509_7245} {RNA1509_39057, RNA1509_7245, RNA815_1844} |
| 4. | MligTC455_41222 | 503 | 10.48 | Mlig455_008819, Mlig455_008917 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.661/0.00033 |
UBE2T | 0.976 | - | - | - | - | - | 0.976 | Mlig455_008819 {REF} {Length: 1153} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=127.8]} {Human: ENSG00000077152, UBE2T, ubiquitin conjugating enzyme E2 T, [RH, Score=166, Expect=2e-51]} {Mouse: ENSMUSG00000026429, Ube2t, ubiquitin-conjugating enzyme E2T, [RH, Score=149, Expect=4e-45]} {Dmel: FBgn0000173, ben, bendless, [Score=129, Expect=4e-38]} {Celegans: WBGene00006708, ubc-13, Ubiquitin-conjugating enzyme E2 13, [Score=134, Expect=7e-40]} {Smed: dd_Smed_v6_1075_0_1, dd_Smed_v6_1075_0_1, [Score=130, Expect=1e-38]} {RNA1509_29240} {RNA1310_31665} {RNA815_39037} Mlig455_008917 {REF} {Length: 1154} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=127.8]} {Human: ENSG00000077152, UBE2T, ubiquitin conjugating enzyme E2 T, [RH, Score=166, Expect=2e-51]} {Mouse: ENSMUSG00000026429, Ube2t, ubiquitin-conjugating enzyme E2T, [RH, Score=149, Expect=4e-45]} {Dmel: FBgn0000173, ben, bendless, [Score=129, Expect=4e-38]} {Celegans: WBGene00006708, ubc-13, Ubiquitin-conjugating enzyme E2 13, [Score=134, Expect=7e-40]} {Smed: dd_Smed_v6_1075_0_1, dd_Smed_v6_1075_0_1, [Score=130, Expect=1e-38]} {RNA1509_29240} {RNA1310_31665} {RNA815_39037} |
| 5. | MligTC455_25909 | 483 | 10.07 | Mlig455_015480, Mlig455_040389 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_015480 {REF} {Length: 1023} {NoTransDecoderORF} {RNA1509_27251} {RNA1310_105013.1} {RNA815_14120.1} Mlig455_040389 {REF} {Length: 84} {NoTransDecoderORF} {RNA1509_27251} {RNA1310_26700} {RNA815_14120.1} |
|
| 6. | MligTC455_20515 | 1058 | 22.04 | Mlig455_008959 | Neo: Irradiation Age: - Region-enriched R5: 1.041/0.01884 |
RPA1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_008959 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=154.5]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=63.1]; OB-fold nucleic acid binding domain [PF01336.27, score=53.2]; Cell division control protein 24, OB domain 3 [PF17244.4, score=28.5]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=496, Expect=1e-168]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=496, Expect=2e-168]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=434, Expect=9e-145]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=217, Expect=1e-61]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=416, Expect=1e-138]} {RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1310_7820.1, RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1509_35290, RNA1509_4117, RNA1509_54395, RNA815_2777} |
| 7. | MligTC455_42543 | 585 | 12.19 | Mlig455_024716 | Neo: Irradiation Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_024716 {REF} {Length: 1616} {TRANSSPLICED} {RNA1509_28702, RNA1509_36056} {RNA1310_20632, RNA1509_28702, RNA1509_36056} {RNA1509_28702, RNA1509_36056, RNA815_8272} | |
| 8. | MligTC455_50277 | 20711 | 431.49 | Mlig455_036476, Mlig455_056261 | Neo: - Age: logFC(26M/2M)=0.341 Region-enriched R7: 1.228/0.00001 |
TNNI2 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_036476 {REF} {Length: 2140} {Pfam: Troponin [PF00992.22, score=109.0]} {Human: ENSG00000130598, TNNI2, troponin I2, fast skeletal type, [RH, Score=53.9, Expect=4e-08]; ENSG00000159173, TNNI1, troponin I1, slow skeletal type, [RH, Score=51.6, Expect=2e-07]} {Mouse: ENSMUSG00000031097, Tnni2, troponin I, skeletal, fast 2, [RH, Score=47.8, Expect=3e-06]} {Dmel: FBgn0283471, wupA, wings up A, [RH, Score=106, Expect=5e-27]} {Celegans: WBGene00006586, tni-4, Troponin I 4, [RH, Score=107, Expect=8e-28]} {Smed: dd_Smed_v6_7974_0_1, dd_Smed_v6_7974_0_1, [RH, Score=181, Expect=8e-55]} {RNA1509_3188, RNA1509_59846} {RNA1310_4012, RNA1509_59846} {RNA1509_59846, RNA815_7139.2} Mlig455_056261 {REF} {Length: 1736} {Pfam: Troponin [PF00992.22, score=109.0]} {Human: ENSG00000130598, TNNI2, troponin I2, fast skeletal type, [RH, Score=53.9, Expect=4e-08]; ENSG00000159173, TNNI1, troponin I1, slow skeletal type, [RH, Score=51.6, Expect=2e-07]} {Mouse: ENSMUSG00000031097, Tnni2, troponin I, skeletal, fast 2, [RH, Score=47.8, Expect=3e-06]} {Dmel: FBgn0283471, wupA, wings up A, [RH, Score=106, Expect=5e-27]} {Celegans: WBGene00006586, tni-4, Troponin I 4, [RH, Score=107, Expect=8e-28]} {Smed: dd_Smed_v6_7974_0_1, dd_Smed_v6_7974_0_1, [RH, Score=181, Expect=8e-55]} {RNA1509_3188} {RNA1310_4012} {RNA815_7139.1} |
| 9. | MligTC455_29472 | 289 | 6.03 | Mlig455_028565 | Neo: Int S/G2/M Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_028565 {REF} {Length: 3475} {RNA1509_15781} {RNA1310_3922} {RNA815_5825} | |
| 10. | MligTC455_47056 | 2133 | 44.44 | Mlig455_010020, Mlig455_010062, Mlig455_063259 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.215 Region-enriched R4: 1.948/0.00001 Regeneration-upregulated BL: 2.218 Regeneration-enriched BL: 2.218 |
SH3BP5L | 0.95 | - | - | - | - | - | 0.950 | Mlig455_010020 {REF} {Length: 1366} {TRANSSPLICED} {Pfam: SH3 domain-binding protein 5 (SH3BP5) [PF05276.16, score=110.0]} {Human: ENSG00000175137, SH3BP5L, SH3 binding domain protein 5 like, [Score=83.6, Expect=3e-18]} {Mouse: ENSMUSG00000013646, Sh3bp5l, SH3 binding domain protein 5 like, [Score=82.8, Expect=3e-18]} {Dmel: FBgn0033988, pcs, parcas, [Score=65.5, Expect=3e-12]} {Celegans: WBGene00019365, rei-2, Guanine nucleotide exchange factor rei-2, [Score=49.3, Expect=7e-07]} {Smed: dd_Smed_v6_1552_0_1, dd_Smed_v6_1552_0_1, [Score=73.9, Expect=2e-15]} {RNA1509_1867} {RNA1310_5610.1} {RNA815_10450} Mlig455_010062 {REF} {Length: 1396} {TRANSSPLICED} {Pfam: SH3 domain-binding protein 5 (SH3BP5) [PF05276.16, score=110.0]} {Human: ENSG00000175137, SH3BP5L, SH3 binding domain protein 5 like, [Score=83.6, Expect=3e-18]} {Mouse: ENSMUSG00000013646, Sh3bp5l, SH3 binding domain protein 5 like, [Score=82.8, Expect=3e-18]} {Dmel: FBgn0033988, pcs, parcas, [Score=65.5, Expect=3e-12]} {Celegans: WBGene00019365, rei-2, Guanine nucleotide exchange factor rei-2, [Score=49.3, Expect=7e-07]} {Smed: dd_Smed_v6_1552_0_1, dd_Smed_v6_1552_0_1, [Score=73.9, Expect=2e-15]} {RNA1509_1867} {RNA1310_5610.1} {RNA815_10450} Mlig455_063259 {REF} {Length: 1411} {TRANSSPLICED} {Pfam: SH3 domain-binding protein 5 (SH3BP5) [PF05276.16, score=110.1]} {Human: ENSG00000175137, SH3BP5L, SH3 binding domain protein 5 like, [Score=82.8, Expect=5e-18]} {Mouse: ENSMUSG00000013646, Sh3bp5l, SH3 binding domain protein 5 like, [Score=82.4, Expect=5e-18]} {Dmel: FBgn0033988, pcs, parcas, [Score=65.5, Expect=3e-12]} {Celegans: WBGene00019365, rei-2, Guanine nucleotide exchange factor rei-2, [Score=51.2, Expect=2e-07]} {Smed: dd_Smed_v6_1552_0_1, dd_Smed_v6_1552_0_1, [Score=73.9, Expect=2e-15]} {RNA1509_1867, RNA1509_22072} {RNA1310_5610.1, RNA1509_22072} {RNA1509_22072, RNA815_10450} |