Data search
Results for MligTC455_29472
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29472 | 289 | 6.03 | Mlig455_028565 | Neo: Int S/G2/M Age: - |
Mlig455_028565 {REF} {Length: 3475} {RNA1509_15781} {RNA1310_3922} {RNA815_5825} |
Cumulative graph for MligTC455_29472
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.783 | 3.17 | 0.07442 | 0.60427 | |
| RegionR2 | 1.599 | 3.17 | 0.11536 | 0.42029 | |
| RegionR3 | 0.118 | 3.17 | 0.81278 | 1.00000 | |
| RegionR4 | -0.342 | 3.17 | 0.93399 | 1.00000 | |
| RegionR5 | 1.737 | 3.17 | 0.00975 | 0.05666 | |
| RegionR6 | 1.011 | 3.17 | 0.27316 | 0.86197 | |
| RegionR7 | 1.308 | 3.17 | 0.24616 | 0.87257 | |
| RegionR8 | 1.352 | 3.17 | 0.34721 | 0.98097 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.496 | 3.17 | 0.99997 | 1.00000 | |
| RegenerationR2 | 0.508 | 3.17 | 0.35094 | 0.78230 | |
| RegenerationR3 | 1.565 | 3.17 | 0.01654 | 0.23523 | |
| RegenerationR4 | 0.548 | 3.17 | 0.35099 | 0.78088 | |
| RegenerationR5 | 0.773 | 3.17 | 0.09297 | 0.46718 | |
| RegenerationR6 | 1.264 | 3.17 | 0.03089 | 0.21917 | |
| RegenerationBL | 0.929 | 3.17 | 0.19719 | 0.53405 | |
| RegenerationTP | -0.866 | 3.17 | 0.40345 | 0.83161 |
Genes with expression patterns similar to MligTC455_29472
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29472 | 289 | 6.03 | Mlig455_028565 | Neo: Int S/G2/M Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028565 {REF} {Length: 3475} {RNA1509_15781} {RNA1310_3922} {RNA815_5825} | |
| 2. | MligTC455_44338 | 719 | 14.98 | Mlig455_041655 | Neo: Irradiation Age: - Region-enriched R5: 2.104/0.00000 |
TECTB | 2.565 | - | - | 0.806 | - | 0.804 | 0.955 | Mlig455_041655 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: Zona pellucida-like domain [PF00100.25, score=93.9]} {Human: ENSG00000119913, TECTB, tectorin beta, [RH, Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000024979, Tectb, tectorin beta, [RH, Score=48.9, Expect=3e-06]} {RNA1509_39057, RNA1509_7245} {RNA1310_6151.1, RNA1509_39057, RNA1509_7245} {RNA1509_39057, RNA1509_7245, RNA815_1844} |
| 3. | MligTC455_42196 | 168 | 3.49 | Mlig455_011715 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 3.320/0.00173 |
2.504 | 0.954 | - | 0.712 | - | - | 0.838 | Mlig455_011715 {REF} {Length: 2400} {TRANSSPLICED} {RNA1509_24615, RNA1509_33212} {RNA1310_9077.2, RNA1509_24615, RNA1509_33212} {RNA1509_24615, RNA1509_33212, RNA815_11156} | |
| 4. | MligTC455_25570 | 26275 | 547.39 | Mlig455_009105, Mlig455_032336 | Neo: Irradiation Age: logFC(26M/2M)=1.836 Region-enriched R5: 3.548/0.00097 |
2.404 | 0.738 | - | 0.951 | - | - | 0.715 | Mlig455_009105 {REF} {Length: 1006} {Pfam: PAN domain [PF14295.8, score=26.2]} {RNA1509_4342} {RNA1310_65774.1} {RNA815_28801.1} Mlig455_032336 {REF} {Length: 766} {Pfam: PAN domain [PF14295.8, score=25.5]} {RNA1509_4342} {RNA1310_65774.1} {RNA815_28801.1} |
|
| 5. | MligTC455_52536 | 125 | 2.6 | Mlig455_023717 | Neo: Irradiation Age: logFC(26M/2M)=0.257 Region-enriched R5: 3.018/0.03050 |
HDAC8 | 1.851 | 0.890 | - | - | - | - | 0.961 | Mlig455_023717 {REF} {Length: 4082} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=249.8]; Histone deacetylase domain [PF00850.21, score=244.5]; OB-fold nucleic acid binding domain [PF01336.27, score=35.0]} {Human: ENSG00000147099, HDAC8, histone deacetylase 8, [RH, Score=347, Expect=2e-111]; ENSG00000285547, AL133500.1, novel protein, [RH, Score=346, Expect=1e-108]} {Mouse: ENSMUSG00000067567, Hdac8, histone deacetylase 8, [RH, Score=350, Expect=1e-112]} {Dmel: FBgn0025825, HDAC3, Histone deacetylase 3, [Score=296, Expect=1e-91]} {Celegans: WBGene00001834, hda-1, Histone deacetylase 1, [Score=297, Expect=9e-92]} {Smed: dd_Smed_v6_695_0_1, dd_Smed_v6_695_0_1, [Score=304, Expect=2e-94]} {RNA1509_32166} {RNA1310_10827} {RNA815_11427} |
| 6. | MligTC455_17928 | 613 | 12.77 | Mlig455_013498 | Neo: Int S/G2/M Age: - |
ACAD8 | 1.721 | - | - | - | - | 0.967 | 0.754 | Mlig455_013498 {REF} {Length: 3076} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=148.5]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=98.8]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=94.2]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=68.3]} {Human: ENSG00000151498, ACAD8, acyl-CoA dehydrogenase family member 8, [RH, Score=517, Expect=0.0]} {Mouse: ENSMUSG00000031969, Acad8, acyl-Coenzyme A dehydrogenase family, member 8, [RH, Score=517, Expect=0.0]} {Dmel: FBgn0037999, CG4860, [Score=243, Expect=3e-76]} {Celegans: WBGene00017874, acdh-9, Acyl CoA DeHydrogenase, [RH, Score=470, Expect=3e-165]} {Smed: dd_Smed_v6_4806_0_1, dd_Smed_v6_4806_0_1, [Score=234, Expect=4e-73]} {RNA1509_28983, RNA1509_7278} {RNA1310_7892, RNA1509_28983, RNA1509_7278} {RNA1509_28983, RNA1509_7278, RNA815_7176.1} |
| 7. | MligTC455_42238 | 170 | 3.55 | Mlig455_000762 | Neo: - Age: - |
MOB2 | 0.977 | - | - | - | - | - | 0.977 | Mlig455_000762 {REF} {Length: 1909} {TRANSSPLICED} {Pfam: Mob1/phocein family [PF03637.19, score=95.5]} {Human: ENSG00000182208, MOB2, MOB kinase activator 2, [Score=105, Expect=2e-27]} {Mouse: ENSMUSG00000025147, Mob2, MOB kinase activator 2, [Score=115, Expect=3e-31]} {Dmel: FBgn0259481, Mob2, [Score=117, Expect=1e-30]} {Smed: dd_Smed_v6_13787_0_1, dd_Smed_v6_13787_0_1, [RH, Score=131, Expect=1e-37]} {RNA1509_22987} {RNA1310_30317} {RNA815_3046.1} |
| 8. | MligTC455_19206 | 81 | 1.68 | Mlig455_005179 | Neo: Int S/G2/M Age: - |
TIMELESS | 0.96 | 0.960 | - | - | - | - | - | Mlig455_005179 {REF} {Length: 5270} {TRANSSPLICED} {Pfam: Timeless protein [PF04821.16, score=144.6]} {Human: ENSG00000111602, TIMELESS, timeless circadian regulator, [RH, Score=330, Expect=2e-93]} {Mouse: ENSMUSG00000039994, Timeless, timeless circadian clock 1, [RH, Score=321, Expect=2e-90]} {Dmel: FBgn0038118, timeout, [Score=250, Expect=4e-67]} {Celegans: WBGene00006571, tim-1, Protein timeless homolog, [RH, Score=146, Expect=5e-35]} {Smed: dd_Smed_v6_19257_0_2, dd_Smed_v6_19257_0_2, [RH, Score=235, Expect=9e-65]} {RNA1509_18295} {RNA1310_1716.2} {RNA815_12908} |
| 9. | MligTC455_16934 | 285 | 5.93 | Mlig455_022742 | Neo: Irradiation Age: - |
KIF23 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_022742 {REF} {Length: 3841} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.8]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=96.4]; Microtubule binding [PF16796.7, score=60.6]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=417, Expect=5e-133]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=375, Expect=7e-116]} {Dmel: FBgn0011692, pav, pavarotti, [Score=435, Expect=3e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=367, Expect=2e-114]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=273, Expect=4e-80]} {RNA1509_14752, RNA1509_36120, RNA1509_53457} {RNA1310_7358.2, RNA1509_14752, RNA1509_36120, RNA1509_53457} {RNA1509_14752, RNA1509_36120, RNA1509_53457, RNA815_8976} |
| 10. | MligTC455_20515 | 1058 | 22.04 | Mlig455_008959 | Neo: Irradiation Age: - Region-enriched R5: 1.041/0.01884 |
RPA1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_008959 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=154.5]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=63.1]; OB-fold nucleic acid binding domain [PF01336.27, score=53.2]; Cell division control protein 24, OB domain 3 [PF17244.4, score=28.5]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=496, Expect=1e-168]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=496, Expect=2e-168]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=434, Expect=9e-145]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=217, Expect=1e-61]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=416, Expect=1e-138]} {RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1310_7820.1, RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1509_35290, RNA1509_4117, RNA1509_54395, RNA815_2777} |
| 11. | MligTC455_25838 | 553 | 11.52 | Mlig455_055480 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_055480 {REF} {Length: 4001} {TRANSSPLICED} {RNA1509_10387} {RNA1310_6525.2, RNA1509_10387} {RNA1509_10387, RNA815_3756.1} | |
| 12. | MligTC455_44886 | 664 | 13.83 | Mlig455_009418 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.267/0.00151 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_009418 {REF} {Length: 2273} {TRANSSPLICED} {RNA1509_19251} {RNA1310_6205.2, RNA1509_19251} {RNA1509_19251, RNA815_3904} | |
| 13. | MligTC455_25569 | 14875 | 309.9 | Mlig455_009147 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 3.258/0.00158 |
0.95 | - | - | 0.950 | - | - | - | Mlig455_009147 {REF} {Length: 882} {Pfam: PAN domain [PF14295.8, score=24.7]} {RNA1509_11555, RNA1509_1513, RNA1509_272, RNA1509_3215, RNA1509_4342, RNA1509_5952} {RNA1310_65774.1, RNA1509_11555, RNA1509_1513, RNA1509_272, RNA1509_3215, RNA1509_4342, RNA1509_5952} {RNA1509_11555, RNA1509_1513, RNA1509_272, RNA1509_3215, RNA1509_4342, RNA1509_5952, RNA815_28801.1} | |
| 14. | MligTC455_38101 | 253 | 5.26 | Mlig455_022140 | Neo: - Age: Down-Up-Down |
PABPC4 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_022140 {REF} {Length: 2639} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=73.0]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=75.1, Expect=7e-15]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=74.3, Expect=1e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=74.3, Expect=9e-15]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=95.1, Expect=4e-23]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=95.1, Expect=5e-22]} {Celegans: WBGene00001368, exc-7, [Score=83.2, Expect=4e-18]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=5e-08]} {RNA1509_12117, RNA1509_58617} {RNA1310_20351.1, RNA1509_58617} {RNA1509_58617, RNA815_17342} |
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