M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_27080

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27080 48 1.00 Mlig455_061810

Neo: -

Age: -

 Mlig455_061810 {REF} {Length: 665} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}

Cumulative graph for MligTC455_27080

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.26 1.259 0.99992 1.00000
RegionR2 4.08 1.259 0.02797 0.18863
RegionR3 0.968 1.259 0.68862 1.00000
RegionR4 0.955 1.259 0.39493 0.72169
RegionR5 1.27 1.259 0.52736 0.88980
RegionR6 0.215 1.259 1.00000 1.00000
RegionR7 -0.786 1.259 0.99962 1.00000
RegionR8 -2.442 1.259 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.216 1.259 1.00000 1.00000
RegenerationR2 1.534 1.259 0.11129 0.52142
RegenerationR3 3.902 1.259 0.01585 0.23035
RegenerationR4 1.75 1.259 0.23455 0.68338
RegenerationR5 3.256 1.259 0.01544 0.21670
RegenerationR6 3.294 1.259 0.08357 0.36144
RegenerationBL 4.718 1.259 0.01874 0.14730
RegenerationTP 4.175 1.259 0.13958 0.55771


Genes with expression patterns similar to MligTC455_27080

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27080 48 1 Mlig455_061810

Neo: -

Age: -

 4 - - 1.000 1.000 1.000 1.000 Mlig455_061810 {REF} {Length: 665} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
2. MligTC455_27063 74 1.54 Mlig455_019209

Neo: -

Age: -

 2.769 - - 0.961 - 0.826 0.982 Mlig455_019209 {REF} {Length: 481} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
3. MligTC455_38597 42 0.87 Mlig455_025025

Neo: -

Age: -

 2.452 - - 0.701 - 0.777 0.974 Mlig455_025025 {REF} {Length: 836} {NoTransDecoderORF} {RNA1509_21228} {RNA1310_9218} {RNA815_7856.3}
4. MligTC455_37508 108 2.26 Mlig455_010524, Mlig455_061849

Neo: -

Age: -

 1.872 - - 0.964 - - 0.908

Mlig455_010524 {REF} {Length: 589} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}

Mlig455_061849 {REF} {Length: 1216} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
5. MligTC455_30270 406 8.46 Mlig455_012719, Mlig455_044289

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 4.823

Regeneration-enriched BL: 4.823

 1.857 - - - - 0.889 0.968

Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575}

Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1}
6. MligTC455_51628 96 2.01 Mlig455_004880, Mlig455_047262

Neo: -

Age: -

Region-enriched R2: 7.137/0.00371

 1.823 - - - - 0.849 0.974

Mlig455_004880 {REF} {Length: 548} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}

Mlig455_047262 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}
7. MligTC455_30255 132 2.75 Mlig455_011743

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.728/0.02036

 1.815 - - - - 0.841 0.974 Mlig455_011743 {REF} {Length: 945} {TRANSSPLICED} {RNA1509_16349} {RNA1310_2575} {RNA815_54759}
8. MligTC455_32078 88 1.83 Mlig455_059989

Neo: -

Age: Up-Down-Down

 SSTR4 1.796 - - - - 0.835 0.961 Mlig455_059989 {REF} {Length: 7870} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=55.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=20.5]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=55.8, Expect=1e-07]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=57.0, Expect=3e-08]} {RNA1509_17715} {RNA1310_22369} {RNA815_5685.1}
9. MligTC455_56264 21 0.44 Mlig455_057708

Neo: -

Age: -

 1.795 - - 0.843 - - 0.952 Mlig455_057708 {REF} {Length: 755} {RNA1509_18097} {RNA1310_18939} {RNA815_5467.1}
10. MligTC455_28329 89 1.86 Mlig455_031656

Neo: -

Age: -

 1.787 - - 0.817 - - 0.970 Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
11. MligTC455_28151 69 1.43 Mlig455_052923

Neo: -

Age: -

 1.781 - - - - 0.820 0.961 Mlig455_052923 {REF} {Length: 885} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613}
12. MligTC455_25776 220 4.59 Mlig455_000479, Mlig455_024867

Neo: -

Age: -

 1.775 - - - - 0.814 0.961

Mlig455_000479 {REF} {Length: 548} {Pfam: PHD-finger [PF00628.31, score=27.6]} {RNA1310_79789}

Mlig455_024867 {REF} {Length: 1776} {Pfam: PHD-finger [PF00628.31, score=25.7]} {RNA1310_46465}
13. MligTC455_49308 26 0.55 Mlig455_055283

Neo: -

Age: -

 ZAN 1.761 - - - - 0.808 0.953 Mlig455_055283 {REF} {Length: 2486} {Pfam: Glycine rich protein [PF12810.9, score=31.8]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=65.1, Expect=4e-10]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=61.6, Expect=3e-09]} {Dmel: FBgn0053196, dpy, dumpy, [Score=51.6, Expect=3e-06]} {RNA1310_18897} {RNA815_40026}
14. MligTC455_28586 32 0.66 Mlig455_032084

Neo: -

Age: Up-Down-Down

 1.757 - - 0.787 - - 0.970 Mlig455_032084 {REF} {Length: 7595} {RNA1509_42521, RNA1509_44223, RNA1509_46209} {RNA1310_31499, RNA1509_42521, RNA1509_46209} {RNA1509_42521, RNA1509_46209, RNA815_19070}
15. MligTC455_43540 65 1.36 Mlig455_063604

Neo: -

Age: -

 1.725 - - 0.956 - - 0.769 Mlig455_063604 {REF} {Length: 1048} {NoTransDecoderORF} {RNA1509_52081} {RNA1310_2648.1} {RNA815_12987}
16. MligTC455_40859 58 1.2 Mlig455_009533

Neo: -

Age: -

 TRIOBP 1.702 - - - - 0.735 0.967 Mlig455_009533 {REF} {Length: 2328} {Human: ENSG00000100106, TRIOBP, TRIO and F-actin binding protein, [Score=58.2, Expect=8e-09]}
17. MligTC455_39058 37 0.77 Mlig455_039326

Neo: -

Age: -

 1.694 - - - - 0.734 0.960 Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}
18. MligTC455_41760 52 1.09 Mlig455_046852

Neo: -

Age: -

 1.687 - - - 0.730 - 0.957 Mlig455_046852 {REF} {Length: 2522} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_58903} {RNA815_47584}
19. MligTC455_00715 24 0.51 Mlig455_060639

Neo: -

Age: -

 1.682 - - - - 0.730 0.952 Mlig455_060639 {REF} {Length: 802} {NoTransDecoderORF} {RNA1509_54585} {RNA1310_91888} {RNA815_7856.1}
20. MligTC455_32612 55 1.15 Mlig455_015630

Neo: -

Age: -

Region-enriched R2: 5.626/0.02523

 ARX 1.672 - - - 0.715 - 0.957 Mlig455_015630 {REF} {Length: 2012} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=133, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=118, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=119, Expect=3e-33]} {RNA1310_42333.1} {RNA815_48205}
21. MligTC455_15541 46 0.95 Mlig455_004049

Neo: -

Age: -

 SYT7 1.661 - - - - 0.704 0.957 Mlig455_004049 {REF} {Length: 2753} {Pfam: C2 domain [PF00168.32, score=65.0]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=110, Expect=2e-26]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=105, Expect=1e-24]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=105, Expect=1e-24]; ENSMUSG00000027849, Syt6, synaptotagmin VI, [Score=104, Expect=3e-24]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=103, Expect=3e-24]; ENSMUSG00000024743, Syt7, synaptotagmin VII, [Score=102, Expect=1e-23]; ENSMUSG00000024261, Syt4, synaptotagmin IV, [Score=100, Expect=6e-23]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=107, Expect=1e-25]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=117, Expect=2e-29]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=103, Expect=2e-24]} {RNA1509_57171} {RNA1310_13836} {RNA815_4752.1}
22. MligTC455_37128 155 3.22 Mlig455_066474, Mlig455_066476

Neo: -

Age: -

 1.657 - - 0.707 - - 0.950

Mlig455_066474 {REF} {Length: 669} {Celegans: WBGene00022511, ZC53.4, [Score=68.6, Expect=3e-15]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=55.8, Expect=8e-11]} {RNA1509_53241} {RNA1310_47825} {RNA815_1671.1}

Mlig455_066476 {REF} {Length: 7427} {Pfam: Coilin N-terminus [PF15862.7, score=22.6]} {RNA1509_23774} {RNA1310_17710.2} {RNA815_1857}
23. MligTC455_14517 21 0.45 Mlig455_071167

Neo: -

Age: -

 0.985 - - - - - 0.985 Mlig455_071167 {REF} {Length: 785} {NoTransDecoderORF} {RNA1310_122612}
24. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

 0.985 - - - - - 0.985 Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
25. MligTC455_40287 116 2.41 Mlig455_043891

Neo: -

Age: logFC(26M/2M)=-0.916

Regeneration-enriched BL: 6.689
Regeneration-enriched R2: 6.021

 0.982 - - - - - 0.982 Mlig455_043891 {REF} {Length: 4345} {RNA1509_22214} {RNA1310_39071, RNA1509_22214} {RNA1509_22214, RNA815_41273}
26. MligTC455_01552 71 1.47 Mlig455_038980

Neo: -

Age: -

 0.979 - - - - - 0.979 Mlig455_038980 {REF} {Length: 991}
27. MligTC455_38236 44 0.91 Mlig455_069041, Mlig455_070137

Neo: -

Age: logFC(26M/2M)=-0.942

 0.979 - - - - - 0.979

Mlig455_069041 {REF} {Length: 2588} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_25455} {RNA815_14978}

Mlig455_070137 {REF} {Length: 1380} {RNA1509_26128} {RNA1310_7005.2} {RNA815_23435}
28. MligTC455_09094 56 1.16 Mlig455_013381

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_013381 {REF} {Length: 506} {NoTransDecoderORF} {RNA1310_99945}
29. MligTC455_56598 18 0.37 Mlig455_042778

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_042778 {REF} {Length: 367} {NoTransDecoderORF} {RNA1310_101806.2}
30. MligTC455_34858 27 0.57 Mlig455_064094

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.290

 DPYD 0.977 - - - - - 0.977 Mlig455_064094 {REF} {Length: 5732} {Pfam: Conserved region in glutamate synthase [PF01645.19, score=504.5]; Glutamate synthase central domain [PF04898.16, score=353.2]; GXGXG motif [PF01493.21, score=249.1]; Glutamine amidotransferases class-II [PF00310.23, score=203.2]; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster [PF14691.8, score=67.6]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=54.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=32.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=27.4]; FAD dependent oxidoreductase [PF01266.26, score=23.4]; HI0933-like protein [PF03486.16, score=22.3]; Thi4 family [PF01946.19, score=22.1]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=21.9]} {Human: ENSG00000188641, DPYD, dihydropyrimidine dehydrogenase, [Score=87.8, Expect=1e-16]} {Mouse: ENSMUSG00000033308, Dpyd, dihydropyrimidine dehydrogenase, [Score=86.3, Expect=3e-16]} {Dmel: FBgn0036663, CG9674, [Score=1686, Expect=0.0]} {Celegans: WBGene00012326, W07E11.1, [Score=1832, Expect=0.0]} {Smed: dd_Smed_v6_5074_0_1, dd_Smed_v6_5074_0_1, [Score=1622, Expect=0.0]} {RNA1509_10634, RNA1509_223, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1310_1077.1, RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495, RNA815_141.1}
31. MligTC455_54466 24 0.5 Mlig455_005145

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_005145 {REF} {Length: 267} {RNA1310_84659}
32. MligTC455_08367 22 0.45 Mlig455_000673

Neo: -

Age: -

 0.975 - - - - - 0.975 Mlig455_000673 {REF} {Length: 899} {Pfam: WSC domain [PF01822.21, score=48.6]; PAN domain [PF00024.28, score=23.3]} {RNA1310_39474.2} {RNA815_33128}
33. MligTC455_17947 64 1.34 Mlig455_042563

Neo: -

Age: -

Region-enriched R2: 7.054/0.00113

 ASCL5 0.974 - - - - - 0.974 Mlig455_042563 {REF} {Length: 1821} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=52.5]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=84.7, Expect=6e-20]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=84.0, Expect=5e-20]} {Dmel: FBgn0002922, nau, nautilus, [Score=49.3, Expect=6e-07]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [RH, Score=90.9, Expect=4e-22]} {Smed: dd_Smed_v6_14753_0_1, dd_Smed_v6_14753_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1310_71187}
34. MligTC455_48213 164 3.41 Mlig455_056285, Mlig455_056310

Neo: -

Age: -

Region-enriched R2: 5.079/0.00142

 0.974 - - - - - 0.974

Mlig455_056285 {REF} {Length: 2259} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}

Mlig455_056310 {REF} {Length: 1953} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}
35. MligTC455_30280 99 2.05 Mlig455_033859

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_033859 {REF} {Length: 3582} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=25.4]; RING-type zinc-finger [PF13445.8, score=21.5]} {RNA1509_5039} {RNA1310_3442.1} {RNA815_4523.1}
36. MligTC455_49969 23 0.48 Mlig455_006042

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_006042 {REF} {Length: 2204} {Pfam: F5/8 type C domain [PF00754.27, score=21.8]} {RNA1509_25922} {RNA1310_32867} {RNA815_55792}
37. MligTC455_01654 34 0.71 Mlig455_025189

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_025189 {REF} {Length: 577} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_76847} {RNA815_29511.2}
38. MligTC455_14045 44 0.93 Mlig455_014678

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_014678 {REF} {Length: 1127} {RNA1509_32807} {RNA1310_50499} {RNA815_11759.1}
39. MligTC455_08728 78 1.63 Mlig455_048047, Mlig455_048066

Neo: -

Age: -

 0.969 - - - - - 0.969

Mlig455_048047 {REF} {Length: 979} {NoTransDecoderORF}

Mlig455_048066 {REF} {Length: 704} {NoTransDecoderORF}
40. MligTC455_09724 48 1.01 Mlig455_009261

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_009261 {REF} {Length: 1012} {NoTransDecoderORF}
41. MligTC455_24621 43 0.9 Mlig455_034366

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_034366 {REF} {Length: 575} {NoTransDecoderORF}
42. MligTC455_45055 25 0.52 Mlig455_068371

Neo: -

Age: Down-Down-Up

 UBL3 0.966 - - - - - 0.966 Mlig455_068371 {REF} {Length: 1666} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=89.3]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [Score=133, Expect=4e-41]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [Score=133, Expect=4e-41]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [Score=129, Expect=5e-37]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [RH, Score=113, Expect=2e-33]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=99.8, Expect=2e-28]} {RNA1509_18224} {RNA1310_51551, RNA1509_18224} {RNA1509_18224, RNA815_23727}
43. MligTC455_11182 44 0.92 Mlig455_029840

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_029840 {REF} {Length: 446} {NoTransDecoderORF} {RNA1310_43812}
44. MligTC455_27802 89 1.86 Mlig455_057249

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_057249 {REF} {Length: 8422} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=129.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.3]; Integrase zinc binding domain [PF17921.3, score=71.9]; Integrase core domain [PF00665.28, score=47.6]; Aspartyl protease [PF13650.8, score=39.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.0]; Retroviral aspartyl protease [PF00077.22, score=28.6]; Aspartyl protease [PF09668.12, score=23.4]; Putative peptidase (DUF1758) [PF05585.14, score=22.5]; Retroviral aspartyl protease [PF08284.13, score=19.6]; DDE superfamily endonuclease [PF13358.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=342, Expect=8e-103]} {RNA1509_28802} {RNA1310_131.1} {RNA815_52.1}
45. MligTC455_39858 79 1.66 Mlig455_038520

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.278

 NECAB1 0.963 - - - - - 0.963 Mlig455_038520 {REF} {Length: 1812} {Pfam: EF-hand domain [PF13405.8, score=35.3]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.7]; EF-hand domain pair [PF13833.8, score=27.4]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=26.7]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=187, Expect=2e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=181, Expect=2e-53]} {RNA1310_5770} {RNA815_27367}
46. MligTC455_40365 195 4.05 Mlig455_038370

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.989/0.00156

 0.963 - - - - - 0.963 Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099}
47. MligTC455_56643 11 0.23 Mlig455_002103

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_002103 {REF} {Length: 238} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
48. MligTC455_56644 11 0.23 Mlig455_002211

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_002211 {REF} {Length: 492} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
49. MligTC455_05881 14 0.29 Mlig455_048278

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_048278 {REF} {Length: 1904} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=35.4]} {RNA1310_71987} {RNA815_42817}
50. MligTC455_04561 26 0.55 Mlig455_024217

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_024217 {REF} {Length: 523} {NoTransDecoderORF} {RNA1310_66947.1}
51. MligTC455_12794 32 0.67 Mlig455_052083

Neo: -

Age: logFC(26M/2M)=-0.315

 CSNK1D 0.96 - - - - - 0.960 Mlig455_052083 {REF} {Length: 2825} {Pfam: Protein kinase domain [PF00069.27, score=97.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=58.1]; Fungal protein kinase [PF17667.3, score=29.9]; Phosphotransferase enzyme family [PF01636.25, score=21.1]} {Human: ENSG00000141551, CSNK1D, casein kinase 1 delta, [RH, Score=578, Expect=0.0]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [RH, Score=573, Expect=0.0]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [RH, Score=578, Expect=0.0]; ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0002413, dco, discs overgrown, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [RH, Score=499, Expect=1e-176]} {Smed: dd_Smed_v6_4561_0_1, dd_Smed_v6_4561_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_19984, RNA1509_33497} {RNA1310_23975, RNA1509_19984, RNA1509_33497} {RNA1509_19984, RNA1509_33497, RNA815_12595}
52. MligTC455_22869 61 1.28 Mlig455_039906, Mlig455_039942

Neo: -

Age: -

Region-enriched R2: 3.948/0.03818

 HCRTR1 0.96 - - - - - 0.960

Mlig455_039906 {REF} {Length: 2770} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=99.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=18.8]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=78.6, Expect=4e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=82.4, Expect=2e-16]} {Dmel: FBgn0025595, AkhR, Adipokinetic hormone receptor, [Score=54.7, Expect=9e-08]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_16129_0_1, dd_Smed_v6_16129_0_1, [RH, Score=215, Expect=2e-65]} {RNA1310_40963.1}

Mlig455_039942 {REF} {Length: 1828} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=99.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=18.8]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=83.2, Expect=9e-17]} {Dmel: FBgn0025595, AkhR, Adipokinetic hormone receptor, [Score=54.7, Expect=9e-08]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=62.0, Expect=3e-10]} {Smed: dd_Smed_v6_16129_0_1, dd_Smed_v6_16129_0_1, [RH, Score=215, Expect=1e-65]} {RNA1310_40963.1}
53. MligTC455_28784 65 1.35 Mlig455_060676

Neo: -

Age: logFC(26M/2M)=-0.366

 ANKRD17 0.96 - - - - - 0.960 Mlig455_060676 {REF} {Length: 5241} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.5]; Ankyrin repeats (many copies) [PF13637.8, score=110.0]; Ankyrin repeat [PF13606.8, score=74.0]; Ankyrin repeats (many copies) [PF13857.8, score=61.8]; Mab-21 protein [PF03281.16, score=44.0]; Ankyrin repeat [PF00023.32, score=41.5]; ABC transporter transmembrane region [PF13748.8, score=21.9]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=95.5, Expect=4e-19]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=95.9, Expect=2e-19]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=80.1, Expect=8e-15]} {Celegans: WBGene00012124, T28D6.4, [Score=67.8, Expect=3e-11]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=90.5, Expect=2e-18]} {RNA1509_27730} {RNA1310_4721} {RNA815_5358.1}
54. MligTC455_40988 23 0.47 Mlig455_059710

Neo: -

Age: logFC(26M/2M)=-0.303

Regeneration-upregulated BL: 7.882

Regeneration-enriched BL: 7.882

 TOGARAM1 0.96 - - - - - 0.960 Mlig455_059710 {REF} {Length: 2947} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=40.6]; Parkin co-regulated protein [PF10274.11, score=29.4]; CLASP N terminal [PF12348.10, score=28.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=28.2]; HEAT repeat [PF02985.24, score=23.1]; Vacuolar 14 Fab1-binding region [PF12755.9, score=20.5]} {Human: ENSG00000198718, TOGARAM1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=3e-73]} {Mouse: ENSMUSG00000035614, Togaram1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=9e-76]} {Dmel: FBgn0259818, CG42399, [Score=69.3, Expect=1e-11]} {Celegans: WBGene00000491, che-12, Crescerin-like protein che-12, [Score=165, Expect=1e-41]} {Smed: dd_Smed_v6_13421_0_1, dd_Smed_v6_13421_0_1, [Score=164, Expect=3e-41]} {RNA1509_8070} {RNA1310_5990, RNA1509_8070} {RNA1509_8070, RNA815_11508}
55. MligTC455_50100 86 1.8 Mlig455_031032

Neo: -

Age: -

Region-enriched R8: 4.201/0.00579

 SLC4A11 0.96 - - - - - 0.960 Mlig455_031032 {REF} {Length: 3497} {Pfam: HCO3- transporter family [PF00955.23, score=526.7]; Band 3 cytoplasmic domain [PF07565.15, score=23.8]; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 [PF00359.24, score=22.0]} {Human: ENSG00000088836, SLC4A11, solute carrier family 4 member 11, [RH, Score=547, Expect=3e-180]} {Mouse: ENSMUSG00000074796, Slc4a11, solute carrier family 4, sodium bicarbonate transporter-like, member 11, [RH, Score=533, Expect=2e-175]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=242, Expect=3e-66]} {Celegans: WBGene00019018, abts-3, Anion transporter ABTS-3; Anion/Bicarbonate TranSporter family, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_16577_0_1, dd_Smed_v6_16577_0_1, [RH, Score=904, Expect=0.0]} {RNA1509_55902} {RNA1310_18543} {RNA815_14015}
56. MligTC455_13403 157 3.27 Mlig455_058321

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.878/0.03174

 LARP1 0.959 - - - - - 0.959 Mlig455_058321 {REF} {Length: 2328} {Human: ENSG00000155506, LARP1, La ribonucleoprotein domain family member 1, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=178, Expect=5e-52]; ENSMUSG00000025762, Larp1b, La ribonucleoprotein domain family, member 1B, [Score=171, Expect=9e-54]} {Dmel: FBgn0261618, larp, La related protein, [Score=172, Expect=4e-50]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=136, Expect=2e-37]} {Smed: dd_Smed_v6_2667_0_1, dd_Smed_v6_2667_0_1, [Score=170, Expect=2e-49]} {RNA1509_29509} {RNA1310_3597.2, RNA1509_29509} {RNA1509_29509, RNA815_2607}
57. MligTC455_22125 178 3.71 Mlig455_028579, Mlig455_028597

Neo: -

Age: -

Region-enriched R2: 5.949/0.00261

 0.959 - - - - - 0.959

Mlig455_028579 {REF} {Length: 993} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}

Mlig455_028597 {REF} {Length: 962} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}
58. MligTC455_49818 37 0.78 Mlig455_007221, Mlig455_007455

Neo: -

Age: -

 0.959 - - - - - 0.959

Mlig455_007221 {REF} {Length: 2050} {RNA1310_53527} {RNA815_61088}

Mlig455_007455 {REF} {Length: 3769} {Mouse: ENSMUSG00000054999, Naaladl1, N-acetylated alpha-linked acidic dipeptidase-like 1, [Score=56.6, Expect=8e-08]} {RNA1310_53527} {RNA815_58531}
59. MligTC455_08498 26 0.55 Mlig455_053380

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_053380 {REF} {Length: 962} {NoTransDecoderORF} {RNA1310_91082}
60. MligTC455_41374 23 0.49 Mlig455_008163

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_008163 {REF} {Length: 715} {RNA1310_116941}
61. MligTC455_31602 208 4.33 Mlig455_031241, Mlig455_031248

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_031241 {REF} {Length: 1588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36986} {RNA1310_4605} {RNA815_16115.1}

Mlig455_031248 {REF} {Length: 2570} {TRANSSPLICED} {RNA1509_36986} {RNA1310_45653} {RNA815_16115.2}
62. MligTC455_39935 46 0.95 Mlig455_068175

Neo: -

Age: Up-Down-Down

 NPNT 0.956 - - - - 0.956 - Mlig455_068175 {REF} {Length: 5966} {Pfam: Calcium-binding EGF domain [PF07645.17, score=32.4]; EGF domain [PF12947.9, score=32.4]; TNFR/NGFR cysteine-rich region [PF00020.20, score=31.2]} {Human: ENSG00000168743, NPNT, nephronectin, [Score=55.8, Expect=5e-07]; ENSG00000123146, ADGRE5, adhesion G protein-coupled receptor E5, [Score=55.1, Expect=1e-06]; ENSG00000143341, HMCN1, hemicentin 1, [Score=54.3, Expect=4e-07]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=55.5, Expect=8e-07]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_41535_0_1, dd_Smed_v6_41535_0_1, [Score=119, Expect=3e-27]} {RNA1310_14177} {RNA815_31673}
63. MligTC455_08698 143 2.98 Mlig455_031781

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.478

 0.955 - - - - 0.955 - Mlig455_031781 {REF} {Length: 1235} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_6571} {RNA1310_3089.2} {RNA815_122.1}
64. MligTC455_09042 16 0.33 Mlig455_039319

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_039319 {REF} {Length: 322} {NoTransDecoderORF} {RNA1310_105283} {RNA815_12207.1}
65. MligTC455_09656 14 0.3 Mlig455_008782

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_008782 {REF} {Length: 329} {NoTransDecoderORF}
66. MligTC455_16579 192 4 Mlig455_002494

Neo: -

Age: logFC(26M/2M)=0.292

 0.954 - - - - - 0.954 Mlig455_002494 {REF} {Length: 4108} {Mouse: ENSMUSG00000020154, Ptprb, protein tyrosine phosphatase, receptor type, B, [Score=55.8, Expect=3e-07]} {RNA1509_28509} {RNA1310_14831.1} {RNA815_5519.1}
67. MligTC455_01710 41 0.85 Mlig455_013827

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_013827 {REF} {Length: 2546} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.2]} {RNA1310_100507} {RNA815_49026}
68. MligTC455_14258 34 0.71 Mlig455_050333

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_050333 {REF} {Length: 1941} {RNA1310_29786} {RNA815_30669}
69. MligTC455_43266 54 1.13 Mlig455_055693

Neo: Int S/G2/M

Age: Down-Down-Down, logFC(26M/2M)=-0.519

Region-enriched R4: 6.195/0.00192
Region-enriched R5: 4.385/0.00451

 MND1 0.951 - - - - 0.951 - Mlig455_055693 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Mnd1 HTH domain [PF03962.17, score=92.0]; Leucine zipper with capping helix domain [PF18517.3, score=44.6]} {Human: ENSG00000121211, MND1, meiotic nuclear divisions 1, [RH, Score=172, Expect=8e-54]} {Mouse: ENSMUSG00000033752, Mnd1, meiotic nuclear divisions 1, [RH, Score=167, Expect=6e-52]} {Smed: dd_Smed_v6_13140_0_1, dd_Smed_v6_13140_0_1, [RH, Score=177, Expect=5e-56]} {RNA1509_32351} {RNA1310_25904, RNA1509_32351} {RNA1509_32351, RNA815_34649}
70. MligTC455_45963 404 8.41 Mlig455_011128, Mlig455_043757

Neo: -

Age: -

 0.951 - - - - - 0.951

Mlig455_011128 {REF} {Length: 1167} {NoTransDecoderORF} {RNA1509_5701} {RNA1310_32112.1} {RNA815_453.1}

Mlig455_043757 {REF} {Length: 1039} {NoTransDecoderORF} {RNA1509_43730, RNA1509_5701} {RNA1310_32112.1, RNA1509_43730} {RNA1509_43730, RNA815_453.2}
71. MligTC455_02646 161 3.36 Mlig455_046275

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_046275 {REF} {Length: 460} {Celegans: WBGene00022511, ZC53.4, [Score=95.9, Expect=6e-24]} {Smed: dd_Smed_v6_15026_0_1, dd_Smed_v6_15026_0_1, [Score=65.5, Expect=8e-15]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}
72. MligTC455_12329 368 7.66 Mlig455_058803, Mlig455_058855

Neo: -

Age: -

 SLC27A1 0.95 - - - - - 0.950

Mlig455_058803 {REF} {Length: 4339} {Pfam: AMP-binding enzyme [PF00501.30, score=46.0]} {Human: ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [Score=99.0, Expect=5e-21]} {Mouse: ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [Score=100, Expect=1e-21]} {Dmel: FBgn0265187, CG44252, [Score=134, Expect=2e-32]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [Score=102, Expect=1e-22]} {RNA1509_57030} {RNA1310_10536.1, RNA1509_57030} {RNA1509_57030, RNA815_6705.1}

Mlig455_058855 {REF} {Length: 2643} {Pfam: AMP-binding enzyme [PF00501.30, score=48.4]} {Human: ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [Score=98.2, Expect=1e-20]} {Mouse: ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [Score=101, Expect=5e-22]; ENSMUSG00000024600, Slc27a6, solute carrier family 27 (fatty acid transporter), member 6, [Score=96.7, Expect=2e-20]} {Dmel: FBgn0265187, CG44252, [Score=136, Expect=3e-33]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [Score=104, Expect=4e-23]} {RNA1509_57030} {RNA1310_10536.1} {RNA815_60362}
73. MligTC455_32628 100 2.09 Mlig455_024050

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_024050 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_26279.1} {RNA815_17829.1}
74. MligTC455_50250 182 3.8 Mlig455_066969

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.390

 SIM1 0.95 - - - - - 0.950 Mlig455_066969 {REF} {Length: 3256} {Pfam: PAS fold [PF08447.14, score=73.2]; PAS fold [PF00989.27, score=58.1]; PAS domain [PF14598.8, score=53.9]; Helix-loop-helix DNA-binding domain [PF00010.28, score=22.4]} {Human: ENSG00000112246, SIM1, SIM bHLH transcription factor 1, [RH, Score=526, Expect=2e-175]; ENSG00000159263, SIM2, SIM bHLH transcription factor 2, [RH, Score=522, Expect=4e-175]} {Mouse: ENSMUSG00000019913, Sim1, single-minded family bHLH transcription factor 1, [RH, Score=525, Expect=4e-175]; ENSMUSG00000062713, Sim2, single-minded family bHLH transcription factor 2, [RH, Score=522, Expect=5e-179]} {Dmel: FBgn0004666, sim, single-minded, [RH, Score=471, Expect=2e-155]} {Celegans: WBGene00011327, hlh-34, Helix-loop-helix 34, [RH, Score=128, Expect=3e-32]} {Smed: dd_Smed_v6_17731_0_1, dd_Smed_v6_17731_0_1, [RH, Score=511, Expect=3e-171]} {RNA1310_34436} {RNA815_20408}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA