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Results for MligTC455_38385

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38385 240 4.99 Mlig455_002351

Neo: -

Age: -

Region-enriched R4: 1.868/0.04052

PSMC3 Mlig455_002351 {REF} {Length: 1725} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.9]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=51.8]; AAA+ lid domain [PF17862.3, score=46.4]; AAA ATPase domain [PF13191.8, score=28.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.5]; AAA domain [PF13401.8, score=21.3]; Protein of unknown function (DUF815) [PF05673.15, score=18.5]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [Score=601, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [Score=599, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [Score=615, Expect=0.0]} {RNA1509_11369} {RNA1310_10892} {RNA815_3190}

Cumulative graph for MligTC455_38385

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.477 2.989 0.35571 0.99880
RegionR2 -0.901 2.989 0.29026 0.67879
RegionR3 -0.506 2.989 0.46102 0.97052
RegionR4 1.868 2.989 0.00575 0.04052
RegionR5 1.153 2.989 0.02392 0.11011
RegionR6 -0.285 2.989 0.68894 1.00000
RegionR7 -0.616 2.989 0.54055 1.00000
RegionR8 -2.19 2.989 0.16486 0.73434

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.431 2.989 0.18177 0.92312
RegenerationR2 -0.023 2.989 0.97282 1.00000
RegenerationR3 0.428 2.989 0.55438 0.88602
RegenerationR4 -0.62 2.989 0.33708 0.76990
RegenerationR5 0.247 2.989 0.67117 0.94139
RegenerationR6 1.058 2.989 0.11355 0.41493
RegenerationBL 2.217 2.989 0.01025 0.10237
RegenerationTP 0.866 2.989 0.49056 0.89582


Genes with expression patterns similar to MligTC455_38385

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38385 240 4.99 Mlig455_002351

Neo: -

Age: -

Region-enriched R4: 1.868/0.04052

PSMC3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002351 {REF} {Length: 1725} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.9]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=51.8]; AAA+ lid domain [PF17862.3, score=46.4]; AAA ATPase domain [PF13191.8, score=28.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.5]; AAA domain [PF13401.8, score=21.3]; Protein of unknown function (DUF815) [PF05673.15, score=18.5]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [Score=600, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [Score=601, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [Score=599, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [Score=615, Expect=0.0]} {RNA1509_11369} {RNA1310_10892} {RNA815_3190}
2. MligTC455_38386 276 5.74 Mlig455_019773

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.680/0.04858

PSMC3 5.861 0.992 0.983 0.983 0.987 0.934 0.982 Mlig455_019773 {REF} {Length: 2330} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.5]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=53.2]; AAA+ lid domain [PF17862.3, score=46.2]; AAA ATPase domain [PF13191.8, score=27.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.6]; AAA domain [PF13401.8, score=20.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.1]} {Human: ENSG00000165916, PSMC3, proteasome 26S subunit, ATPase 3, [RH, Score=726, Expect=0.0]} {Mouse: ENSMUSG00000002102, Psmc3, proteasome (prosome, macropain) 26S subunit, ATPase 3, [RH, Score=727, Expect=0.0]} {Dmel: FBgn0028684, Rpt5, Regulatory particle triple-A ATPase 5, [RH, Score=726, Expect=0.0]} {Celegans: WBGene00004505, rpt-5, Proteasome Regulatory Particle, ATPase-like, [RH, Score=711, Expect=0.0]} {Smed: dd_Smed_v6_1855_0_1, dd_Smed_v6_1855_0_1, [RH, Score=741, Expect=0.0]} {RNA1509_11369} {RNA1310_10892, RNA1509_11369} {RNA1509_11369, RNA815_3190}
3. MligTC455_51495 245 5.11 Mlig455_010119

Neo: -

Age: Down-Up-Down

GPAT4 2.483 - - - 0.786 0.952 0.745 Mlig455_010119 {REF} {Length: 2960} {TRANSSPLICED} {Pfam: Acyltransferase [PF01553.23, score=64.5]} {Human: ENSG00000158669, GPAT4, glycerol-3-phosphate acyltransferase 4, [RH, Score=419, Expect=2e-143]; ENSG00000138678, GPAT3, glycerol-3-phosphate acyltransferase 3, [RH, Score=414, Expect=5e-142]} {Mouse: ENSMUSG00000031545, Gpat4, glycerol-3-phosphate acyltransferase 4, [RH, Score=417, Expect=5e-143]; ENSMUSG00000029314, Gpat3, glycerol-3-phosphate acyltransferase 3, [RH, Score=415, Expect=3e-142]} {Dmel: FBgn0034971, CG3209, [RH, Score=421, Expect=2e-144]} {Celegans: WBGene00018657, acl-4, ACyLtransferase-like, [RH, Score=373, Expect=7e-124]} {Smed: dd_Smed_v6_2445_0_1, dd_Smed_v6_2445_0_1, [RH, Score=442, Expect=5e-153]} {RNA1509_23533, RNA1509_29142, RNA1509_4086} {RNA1310_9500.1, RNA1509_23533, RNA1509_29142, RNA1509_4086} {RNA1509_23533, RNA1509_29142, RNA1509_4086, RNA815_5264.1}
4. MligTC455_39846 11660 242.93 Mlig455_004341, Mlig455_004353

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.306

Region-enriched R4: 1.674/0.00000

Regeneration-enriched BL: 1.619
Regeneration-enriched R6: 1.119

CCT7 1.741 0.787 - - - 0.954 -

Mlig455_004341 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1310_8189.1, RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695, RNA815_2882.1}

Mlig455_004353 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_23051, RNA1509_8695} {RNA1310_8189.1, RNA1509_23051} {RNA1509_23051, RNA815_2882.1}
5. MligTC455_43898 418 8.71 Mlig455_004960, Mlig455_019699

Neo: -

Age: -

Region-enriched R4: 3.458/0.01813
Region-enriched R5: 3.002/0.00810

1.721 0.771 - - - 0.950 -

Mlig455_004960 {REF} {Length: 625} {RNA1310_61727} {RNA815_33442}

Mlig455_019699 {REF} {Length: 555} {RNA1310_61727} {RNA815_33442}
6. MligTC455_52897 152 3.18 Mlig455_024542

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.837/0.04113

BARD1 1.721 - - - 0.754 - 0.967 Mlig455_024542 {REF} {Length: 2496} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.2]; Ankyrin repeats (many copies) [PF13637.8, score=61.3]; Ankyrin repeat [PF00023.32, score=57.4]; Ankyrin repeat [PF13606.8, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=46.6]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=39.0]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=32.1]; RING-type zinc-finger [PF13445.8, score=22.1]; Prokaryotic RING finger family 4 [PF14447.8, score=21.5]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=21.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.2]} {Human: ENSG00000138376, BARD1, BRCA1 associated RING domain 1, [RH, Score=218, Expect=2e-60]} {Mouse: ENSMUSG00000026196, Bard1, BRCA1 associated RING domain 1, [RH, Score=217, Expect=2e-60]} {Dmel: FBgn0036814, CG14073, [RH, Score=89.0, Expect=8e-18]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=71.6, Expect=6e-13]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [Score=103, Expect=8e-23]} {RNA1509_6999} {RNA1310_8348} {RNA815_2740}
7. MligTC455_13192 671 13.98 Mlig455_002614

Neo: -

Age: -

Region-enriched R4: 1.373/0.02456
Region-enriched R3: 1.194/0.03102

1.695 - - - 0.734 0.961 - Mlig455_002614 {REF} {Length: 3568} {RNA1509_30667, RNA1509_40798} {RNA1310_11136.1, RNA1509_30667, RNA1509_40798} {RNA1509_30667, RNA1509_40798, RNA815_5021.1}
8. MligTC455_53477 156 3.25 Mlig455_044952

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 3.164/0.01936
Region-enriched R5: 2.913/0.00193

1.686 - 0.717 - 0.969 - - Mlig455_044952 {REF} {Length: 558} {TRANSSPLICED} {RNA1509_31514} {RNA1310_26227} {RNA815_13760}
9. MligTC455_27875 5216 108.66 Mlig455_023366

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=0.674

Region-enriched R4: 1.113/0.00408

Regeneration-upregulated BL: 1.361

Regeneration-enriched BL: 1.361

DDX39B 1.682 - - - - 0.952 0.730 Mlig455_023366 {REF} {Length: 1709} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_632} {RNA1310_17749} {RNA815_6753}
10. MligTC455_08189 422 8.78 Mlig455_055754

Neo: -

Age: -

Region-enriched R5: 1.257/0.01328

0.962 - - - - - 0.962 Mlig455_055754 {REF} {Length: 1152} {TRANSSPLICED} {RNA1509_44842} {RNA1310_31507.1, RNA1509_44842} {RNA1509_44842, RNA815_13475}
11. MligTC455_48552 184 3.84 Mlig455_022765

Neo: -

Age: logFC(26M/2M)=0.271

Region-enriched R5: 1.403/0.03486

GTF2H4 0.961 - - - - - 0.961 Mlig455_022765 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: Transcription factor Tfb2 [PF03849.16, score=310.2]; Transcription factor Tfb2 (p52) C-terminal domain [PF18307.3, score=76.3]} {Human: ENSG00000226384, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000236895, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000221974, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000233149, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000234370, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]; ENSG00000213780, GTF2H4, general transcription factor IIH subunit 4, [RH, Score=314, Expect=1e-101]} {Mouse: ENSMUSG00000001524, Gtf2h4, general transcription factor II H, polypeptide 4, [RH, Score=314, Expect=7e-102]} {Dmel: FBgn0261109, mrn, marionette, [RH, Score=306, Expect=1e-98]} {Celegans: WBGene00013529, Y73F8A.24, General transcription factor IIH subunit 4, [RH, Score=186, Expect=2e-53]} {Smed: dd_Smed_v6_11510_0_1, dd_Smed_v6_11510_0_1, [RH, Score=172, Expect=3e-48]} {RNA1509_23204, RNA1509_41750} {RNA1310_18685, RNA1509_23204, RNA1509_41750} {RNA1509_23204, RNA1509_41750, RNA815_72.1}
12. MligTC455_42090 625 13.03 Mlig455_003814

Neo: Int S/G2/M

Age: Down-Down-Up

Region-enriched R5: 1.603/0.00005

POLD2 0.959 - - - - - 0.959 Mlig455_003814 {REF} {Length: 2103} {TRANSSPLICED} {Pfam: DNA polymerase alpha/epsilon subunit B [PF04042.18, score=147.9]; DNA polymerase delta subunit OB-fold domain [PF18018.3, score=132.3]} {Human: ENSG00000106628, POLD2, DNA polymerase delta 2, accessory subunit, [RH, Score=345, Expect=3e-114]} {Mouse: ENSMUSG00000020471, Pold2, polymerase (DNA directed), delta 2, regulatory subunit, [RH, Score=350, Expect=2e-116]} {Dmel: FBgn0027903, CG12018, [RH, Score=282, Expect=1e-90]} {Celegans: WBGene00008722, F12F6.7, Probable DNA polymerase delta small subunit, [RH, Score=161, Expect=2e-44]} {Smed: dd_Smed_v6_8399_0_1, dd_Smed_v6_8399_0_1, [RH, Score=244, Expect=8e-76]} {RNA1509_24914, RNA1509_35013} {RNA1310_19622.1, RNA1509_24914, RNA1509_35013} {RNA1509_24914, RNA1509_35013, RNA815_16200}
13. MligTC455_26122 143 2.98 Mlig455_037008

Neo: -

Age: -

GINS2 0.956 - - - - 0.956 - Mlig455_037008 {REF} {Length: 1583} {TRANSSPLICED} {Pfam: GINS complex protein [PF05916.13, score=74.5]} {Human: ENSG00000131153, GINS2, GINS complex subunit 2, [RH, Score=184, Expect=9e-59]} {Mouse: ENSMUSG00000031821, Gins2, GINS complex subunit 2 (Psf2 homolog), [RH, Score=191, Expect=2e-61]} {Dmel: FBgn0261976, Psf2, [RH, Score=150, Expect=2e-45]} {Smed: dd_Smed_v6_15389_0_1, dd_Smed_v6_15389_0_1, [RH, Score=118, Expect=1e-33]} {RNA1509_45337, RNA1509_53194} {RNA1310_24811.1, RNA1509_45337, RNA1509_53194} {RNA1509_45337, RNA1509_53194, RNA815_15403.1}
14. MligTC455_13616 373 7.77 Mlig455_063500

Neo: -

Age: Down-Down-Up

SLC47A1 0.955 - - - - 0.955 - Mlig455_063500 {REF} {Length: 1898} {Pfam: MatE [PF01554.20, score=96.5]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=143, Expect=7e-37]} {Mouse: ENSMUSG00000010122, Slc47a1, solute carrier family 47, member 1, [Score=144, Expect=2e-37]} {Smed: dd_Smed_v6_7241_0_1, dd_Smed_v6_7241_0_1, [Score=187, Expect=8e-53]} {RNA1509_33085} {RNA1310_12101} {RNA815_32639}
15. MligTC455_17124 484 10.08 Mlig455_002400, Mlig455_060153

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R4: 2.442/0.02922
Region-enriched R5: 2.301/0.00162

NFYC 0.951 - - - - - 0.951

Mlig455_002400 {REF} {Length: 2095} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1, RNA1509_28888} {RNA1509_28888, RNA815_29133}

Mlig455_060153 {REF} {Length: 2439} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133}

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